Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021723
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    47   2e-07
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    25   0.80 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.5  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +2

Query: 224 AVRHQTLAPRRIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPY---VVTRYYR 394
           A+  + LA  R++HRDL   N++V  + T+K+ DFGL+R      +        +   + 
Sbjct: 602 ALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKNGGGKLPVRWM 661

Query: 395 APEVILGMGYTENVDIWSVGCIMGEMIR-GGVLFPGTDHS 511
           A E +    YT   D+WS G ++ E++  GG  + G   S
Sbjct: 662 ALESLTHQRYTTYSDVWSFGVLLWEIVTLGGTPYVGVHSS 701


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 39  FKLMKLVNHKNI-IGLLNAFTPQKSLEEFQD 128
           F LM L NHKN+ +G L     QK    FQD
Sbjct: 7   FALMLLANHKNVQVGDLVQKIAQKLQVLFQD 37


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 194 VIQIHLNHLAQISVHQLHNQVNV 126
           V Q++L H   +++HQ H+Q N+
Sbjct: 300 VEQMNLLHSNDLNMHQQHHQQNM 322


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 519 PLVEWSVPGNSTPPRIISPMMQPT 448
           P  +W+ P  + PP + S +  PT
Sbjct: 48  PPSDWNCPQYNAPPYMSSVLQLPT 71


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -3

Query: 228 TASGTADSS--SVRDPDPSESLGTD*RPSAP*PG 133
           T+SG+ DSS  SV DP   E+       + P PG
Sbjct: 380 TSSGSTDSSSQSVEDPQQVEAAIVHLIANLPSPG 413


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 519 PLVEWSVPGNSTPPRIISPMMQPT 448
           P  +W+ P  + PP + S +  PT
Sbjct: 39  PPSDWNCPQYNAPPYMSSVLQLPT 62


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 364 HHEGGPGGASQP 329
           HH GGP    QP
Sbjct: 63  HHYGGPPSGGQP 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,679
Number of Sequences: 336
Number of extensions: 2978
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)