Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021722
         (616 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q93971 Cluster: Transient receptor potential channel; n...    33   4.1  
UniRef50_Q1JZI7 Cluster: Diguanylate cyclase precursor; n=1; Des...    33   5.4  
UniRef50_A7S5G3 Cluster: Predicted protein; n=1; Nematostella ve...    32   9.4  
UniRef50_Q2TW07 Cluster: Predicted protein; n=1; Aspergillus ory...    32   9.4  

>UniRef50_Q93971 Cluster: Transient receptor potential channel; n=6;
            Caenorhabditis|Rep: Transient receptor potential channel
            - Caenorhabditis elegans
          Length = 2032

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
 Frame = +3

Query: 147  ETKALNVTSRDPIKSPLKKSLSFLQLRCRNDIYRALPSCVSIR---KYVRPNRA 299
            + + ++VTS DP+  PL K LS + +R R++ Y ++   ++IR   + +R NR+
Sbjct: 1811 QQRLMSVTSMDPLPLPLAK-LSTMSIRRRHEEYTSITDSIAIRHPERRIRNNRS 1863


>UniRef50_Q1JZI7 Cluster: Diguanylate cyclase precursor; n=1;
           Desulfuromonas acetoxidans DSM 684|Rep: Diguanylate
           cyclase precursor - Desulfuromonas acetoxidans DSM 684
          Length = 548

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = -1

Query: 322 YITFLVIRARFGRTYLRMDTHDGSAR*MSFRHLSCRKDKDFF-SGLFIGSREVTFSAF 152
           Y+    + A+ GR  +R+D+  G A  +  +HL  +  +D+F  G+ + +R V FS F
Sbjct: 115 YLQLRFLNAQ-GREVVRIDSESGHAYKVDEKHLQNKSQRDYFQQGIQLENRNVYFSRF 171


>UniRef50_A7S5G3 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 209

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = +1

Query: 22  CVDLFCLFTVSSGLNV--FKCVVYLYVMYINCLISVKVHKC 138
           CV ++ L  +S  L+V   KCV+Y+ ++Y++C +SVK  KC
Sbjct: 12  CV-IYILLYLSCPLSVKSSKCVIYI-ILYLSCPLSVKSSKC 50


>UniRef50_Q2TW07 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 273

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -3

Query: 335 NGGHLYNLSRDSSSVWSHVFANGHTRRQRAVNVISTPQLQK 213
           +G  L NLSR +S VWS V A+G     R+   IS  +L++
Sbjct: 224 SGTSLSNLSRRASRVWSCVLASGRAMSPRSTICISGTRLRR 264


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,288,019
Number of Sequences: 1657284
Number of extensions: 10105727
Number of successful extensions: 20707
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20702
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)