BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021722
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X61631-1|CAA43819.1| 446|Homo sapiens protein ( H.sapiens Wilms... 31 4.3
X51630-1|CAA35956.1| 575|Homo sapiens Krueppel-like zinc-finge... 31 4.3
M80232-1|AAA61299.1| 449|Homo sapiens Wilms' tumor assocated pr... 31 4.3
AY245105-1|AAO61088.1| 449|Homo sapiens Wilms tumor 1 protein. 31 4.3
AL049692-5|CAI95760.1| 302|Homo sapiens Wilms tumor 1 protein. 31 4.3
AL049692-3|CAI95759.2| 517|Homo sapiens Wilms tumor 1 protein. 31 4.3
BC032861-1|AAH32861.1| 302|Homo sapiens WT1 protein protein. 29 9.9
>X61631-1|CAA43819.1| 446|Homo sapiens protein ( H.sapiens Wilms
tumor gene 1, exon 1. ).
Length = 446
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 272 SQIRATKPSSNHEKGYINDHHFTRIIFILYHLISFHTMF 388
S ++ T+ SNH GY +D+H T I+ + I H +F
Sbjct: 256 SSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHGVF 294
>X51630-1|CAA35956.1| 575|Homo sapiens Krueppel-like zinc-finger
protein protein.
Length = 575
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 272 SQIRATKPSSNHEKGYINDHHFTRIIFILYHLISFHTMF 388
S ++ T+ SNH GY +D+H T I+ + I H +F
Sbjct: 382 SSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHGVF 420
>M80232-1|AAA61299.1| 449|Homo sapiens Wilms' tumor assocated
protein protein.
Length = 449
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 272 SQIRATKPSSNHEKGYINDHHFTRIIFILYHLISFHTMF 388
S ++ T+ SNH GY +D+H T I+ + I H +F
Sbjct: 256 SSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHGVF 294
>AY245105-1|AAO61088.1| 449|Homo sapiens Wilms tumor 1 protein.
Length = 449
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 272 SQIRATKPSSNHEKGYINDHHFTRIIFILYHLISFHTMF 388
S ++ T+ SNH GY +D+H T I+ + I H +F
Sbjct: 256 SSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHGVF 294
>AL049692-5|CAI95760.1| 302|Homo sapiens Wilms tumor 1 protein.
Length = 302
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 272 SQIRATKPSSNHEKGYINDHHFTRIIFILYHLISFHTMF 388
S ++ T+ SNH GY +D+H T I+ + I H +F
Sbjct: 112 SSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHGVF 150
>AL049692-3|CAI95759.2| 517|Homo sapiens Wilms tumor 1 protein.
Length = 517
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 272 SQIRATKPSSNHEKGYINDHHFTRIIFILYHLISFHTMF 388
S ++ T+ SNH GY +D+H T I+ + I H +F
Sbjct: 324 SSVKWTEGQSNHSTGYESDNHTTPILCGAQYRIHTHGVF 362
>BC032861-1|AAH32861.1| 302|Homo sapiens WT1 protein protein.
Length = 302
Score = 29.5 bits (63), Expect = 9.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 272 SQIRATKPSSNHEKGYINDHHFTRIIFILYHLISFHTMF 388
S ++ T+ SNH GY +D+H T I+ + + H +F
Sbjct: 112 SSVKWTEGQSNHSTGYESDNHTTPILCGAQYRMHTHGVF 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,185,210
Number of Sequences: 237096
Number of extensions: 1445712
Number of successful extensions: 5905
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5905
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -