Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021721
         (640 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16NE6 Cluster: Putative uncharacterized protein; n=1; ...    43   0.005
UniRef50_Q9VYE8 Cluster: CG15745-PB, isoform B; n=3; Sophophora|...    38   0.15 
UniRef50_Q0IED4 Cluster: Spidroin 1, putative; n=1; Aedes aegypt...    34   2.5  
UniRef50_Q27W64 Cluster: NigAX; n=1; Streptomyces violaceusniger...    33   5.8  

>UniRef50_Q16NE6 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 526

 Score = 43.2 bits (97), Expect = 0.005
 Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +3

Query: 249 STEAM-SPRRERTLVEAHVVELGRRGSEGCETRGRTVRTPSVVVSDYSDGVAVGATEEEV 425
           STEA+ SP    +  E+    +   G +G     R VRTPSVVVSDYSD    G T EE+
Sbjct: 359 STEALGSPSNSISRRESAQSYVSDSGVDGV----RYVRTPSVVVSDYSDDTMCGITLEEI 414

Query: 426 NWLR 437
            +LR
Sbjct: 415 EYLR 418


>UniRef50_Q9VYE8 Cluster: CG15745-PB, isoform B; n=3;
           Sophophora|Rep: CG15745-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 566

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 321 GSEGCETRGRTVRTPSVVVSDYSDGV-AVGATEEEVNWLR 437
           G  G     R VRTPSVVVSDYSD + A G + EE+ + R
Sbjct: 352 GVSGLPLGVRYVRTPSVVVSDYSDDITACGISMEEMEYFR 391


>UniRef50_Q0IED4 Cluster: Spidroin 1, putative; n=1; Aedes
           aegypti|Rep: Spidroin 1, putative - Aedes aegypti
           (Yellowfever mosquito)
          Length = 587

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -3

Query: 422 FFFCSTHCNSIRVVADNDTGRPDRTASCLTAFAASSAQLYHMRLYES 282
           FF C+  C  +++V D+ + RP +   C  AF   +    HM ++E+
Sbjct: 3   FFKCTNTCTILKIVEDDGSDRPYKCDLCDRAFHRKTHMTRHMTMHEA 49


>UniRef50_Q27W64 Cluster: NigAX; n=1; Streptomyces
           violaceusniger|Rep: NigAX - Streptomyces violaceoniger
          Length = 1299

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = -2

Query: 327 RCLFCPALPHAPLRESSPVSATWPR---WRGNIAWMRVPPKPSLELNG 193
           R L  PA     L E  P  ATW R   WR  I W  +P  P+  L G
Sbjct: 801 RALEVPAERREALAELLPALATWRRQREWRYRIVWKPLPDPPAPRLTG 848


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,261,077
Number of Sequences: 1657284
Number of extensions: 8855166
Number of successful extensions: 30803
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30795
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)