Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021721
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    30   0.022
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    26   0.27 
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   3.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   4.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   4.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   4.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.6  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 29.9 bits (64), Expect = 0.022
 Identities = 22/56 (39%), Positives = 28/56 (50%)
 Frame = +3

Query: 225 LASTRYYPSTEAMSPRRERTLVEAHVVELGRRGSEGCETRGRTVRTPSVVVSDYSD 392
           L  TR Y S  A+    ++T        +    S+  + R R  RTPSVVVSDYSD
Sbjct: 240 LRVTRCYSSDSAVLSDEDQTKGWDGSNMVEGNESDHNDGRLRYWRTPSVVVSDYSD 295


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 215 LGGTRIHAILPLHRGHVAETGEDSRRGACG 304
           LGGT +H  +  HRGH  +     ++GA G
Sbjct: 150 LGGTTLHHGMAYHRGHRKDYERWVQQGAFG 179


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 315 RRGSEGCETRGRTVRTPSVVVSDYSDGVAVGATEEE 422
           RRGS+G +   R  R+PS  +     G ++  ++ +
Sbjct: 90  RRGSDGSQLAMRNDRSPSYSMQVPQQGASIDDSDPD 125


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 315 RRGSEGCETRGRTVRTPSVVVSDYSDGVAVGATEEE 422
           RRGS+G +   R  R+PS  +     G ++  ++ +
Sbjct: 538 RRGSDGSQLAMRNDRSPSYSMQVPQQGASIDDSDPD 573


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 537 IIFFGIVGDS 508
           ++FFG+VGDS
Sbjct: 316 VLFFGLVGDS 325


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 537 IIFFGIVGDS 508
           ++FFG+VGDS
Sbjct: 316 VLFFGLVGDS 325


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 537 IIFFGIVGDS 508
           ++FFG+VGDS
Sbjct: 316 VLFFGLVGDS 325


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -2

Query: 537 IIFFGIVGDST 505
           ++FFG+VGD++
Sbjct: 314 VLFFGLVGDTS 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,935
Number of Sequences: 438
Number of extensions: 2378
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)