Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021720
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    25   1.8  
AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding pr...    24   4.3  
AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding pr...    24   4.3  

>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 58  ETVNIFRHHCPMMGLPDRGIPEDKLPQCWYDD 153
           E+V IFR+ C    +PD   P D   Q   D+
Sbjct: 68  ESVAIFRYLCREYQVPDHWYPADSRRQALVDE 99


>AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding
           protein AgamOBP57 protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = +1

Query: 115 IPEDKLPQCWYDDVRM-NALFAPFRLKTTNPESWDMKMKFWSDMLRQC 255
           + E  + QC +D+V + +  F P      NPE +D     W      C
Sbjct: 109 LAEGFIQQC-FDEVELTDGAFVPSDEAKCNPEGFDFVFCLWRQFTLAC 155


>AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding
           protein OBP14426 protein.
          Length = 204

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = +1

Query: 115 IPEDKLPQCWYDDVRM-NALFAPFRLKTTNPESWDMKMKFWSDMLRQC 255
           + E  + QC +D+V + +  F P      NPE +D     W      C
Sbjct: 123 LAEGFIQQC-FDEVELTDGAFVPSDEAKCNPEGFDFVFCLWRQFTLAC 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,149
Number of Sequences: 2352
Number of extensions: 15624
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)