Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021720
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145648-1|AAD38623.1|  448|Drosophila melanogaster BcDNA.GH0838...    41   0.002
AE014296-3346|AAN12125.2|  448|Drosophila melanogaster CG5498-PB...    41   0.002

>AF145648-1|AAD38623.1|  448|Drosophila melanogaster BcDNA.GH08385
           protein.
          Length = 448

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 133 PQCWYDDVRMNALFAPFRLKTTNPESWDMKMKFWSDML 246
           P  W D+ RM   FA FR +  + E +D KM FW D++
Sbjct: 18  PASWQDNGRMQVQFAMFRSRHLDAEGYDAKMNFWMDLI 55



 Score = 37.1 bits (82), Expect = 0.025
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 273 PIVSSADARAAFQRKGRTPACLDIVIEEMFRSGELCPISKYQRILHNGTEGWV 431
           PI S  D +  F R  + PACLD VI EM +  ++   S+++    N   GW+
Sbjct: 65  PIFSLRDLQLLFMRGDQLPACLDTVISEMQQRKQIRSRSEFEYDPANSWGGWL 117


>AE014296-3346|AAN12125.2|  448|Drosophila melanogaster CG5498-PB
           protein.
          Length = 448

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 133 PQCWYDDVRMNALFAPFRLKTTNPESWDMKMKFWSDML 246
           P  W D+ RM   FA FR +  + E +D KM FW D++
Sbjct: 18  PASWQDNGRMQVQFAMFRSRHLDAEGYDAKMNFWMDLI 55



 Score = 37.1 bits (82), Expect = 0.025
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 273 PIVSSADARAAFQRKGRTPACLDIVIEEMFRSGELCPISKYQRILHNGTEGWV 431
           PI S  D +  F R  + PACLD VI EM +  ++   S+++    N   GW+
Sbjct: 65  PIFSLRDLQLLFMRGDQLPACLDTVISEMQQRKQIRSRSEFEYDPANSWGGWL 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,759,000
Number of Sequences: 53049
Number of extensions: 672495
Number of successful extensions: 1618
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)