Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021717X
(359 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 48 4e-05
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 48 4e-05
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 48 4e-05
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 48 4e-05
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 48 4e-05
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 44 0.001
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 44 0.001
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 43 0.001
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 40 0.017
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 39 0.023
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 36 0.16
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 36 0.28
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 35 0.37
UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep: L... 33 1.1
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 32 2.6
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 32 2.6
UniRef50_Q6FQ72 Cluster: Similarities with sp|P40095 Saccharomyc... 32 3.5
UniRef50_A0TQG6 Cluster: 200 kDa antigen p200, putative; n=1; Bu... 31 4.6
UniRef50_Q11DU5 Cluster: Cobalamin synthesis protein, P47K; n=1;... 31 8.0
UniRef50_Q1RU93 Cluster: RNA-directed DNA polymerase (Reverse tr... 31 8.0
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 48.4 bits (110), Expect = 4e-05
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI LE IYLFSLPI+E EIID FLG SL D
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 44
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 48.4 bits (110), Expect = 4e-05
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 48.4 bits (110), Expect = 4e-05
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI LE IYLFSLPI+E EIID FLG SL D
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 79
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 48.4 bits (110), Expect = 4e-05
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI LE IYLFSLPI+E EIID FLG SL D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 32
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 48.4 bits (110), Expect = 4e-05
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 43.6 bits (98), Expect = 0.001
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
+I L IYLFSLPI+E EIID+FLG +L D
Sbjct: 62 EIKSLGEIYLFSLPIKETEIIDIFLGAALKD 92
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 43.6 bits (98), Expect = 0.001
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI LE IYLFSLPI+ EIID FLG SL +
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKN 104
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI +E IYL+SLPI+E++I+D FL P LND
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLND 77
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 39.5 bits (88), Expect = 0.017
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI LE I+LFSLPI+E +I++ F+G L D
Sbjct: 64 KIKSLEHIFLFSLPIKEHQIVEHFIGGELKD 94
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 39.1 bits (87), Expect = 0.023
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +1
Query: 247 PSCRXXKIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
P + K+ L+ +YLFSLPI+EFE+ D LG L D
Sbjct: 130 PQVKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKD 165
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI +E I+L SLP++EF+IID L P L D
Sbjct: 49 KITTIEEIFLHSLPVKEFQIIDTLL-PGLQD 78
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 35.5 bits (78), Expect = 0.28
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFL 339
KI LE+I+ FS+PI+E++I+D FL
Sbjct: 78 KIKSLETIFQFSIPIKEYQIVDHFL 102
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 35.1 bits (77), Expect = 0.37
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = -1
Query: 233 QEPTLSGXXCRAHDHGRDHDRVHE-DRRGLYLHRVSRIR--RENRHV---HRLEQRPPL 75
+EPT S CR+ GR H R G HR+SR R +R + HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep:
Legumin-like - Lupinus albus (White lupin)
Length = 265
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 233 QEPTLSGXXCRAHDHGRDHDRVHEDRRGLYLHRVSRIRRENRHVHRLEQR 84
+E G R H H H+ E+ + H+V R+RR +RH H + R
Sbjct: 103 EEDERRGDRRRRHPHHHHHEEEEEEEEE-WSHQVRRVRRPHRHHHHRKDR 151
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI L+ +YLFS PI+EFE+ D L L D
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKD 31
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
KI LE I+ FS IRE EI+DL G S+ +
Sbjct: 35 KITSLEQIFKFSHVIREPEIVDLLCGNSIKE 65
>UniRef50_Q6FQ72 Cluster: Similarities with sp|P40095 Saccharomyces
cerevisiae YER158c; n=1; Candida glabrata|Rep:
Similarities with sp|P40095 Saccharomyces cerevisiae
YER158c - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 517
Score = 31.9 bits (69), Expect = 3.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 203 RAHDHGRDHDRVHEDRRGLYLHRVSRIRRENRHVHRLEQ 87
R +HGR+H+R HE R R + R + HV+R Q
Sbjct: 168 RGREHGREHEREHERER----DRQHELSRRHSHVYRAPQ 202
>UniRef50_A0TQG6 Cluster: 200 kDa antigen p200, putative; n=1;
Burkholderia cenocepacia MC0-3|Rep: 200 kDa antigen
p200, putative - Burkholderia cenocepacia MC0-3
Length = 523
Score = 31.5 bits (68), Expect = 4.6
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 230 EPTLSGXXCRAHDHGRDHDRVHEDRRGLYLHRVSRIRR-ENRHVHRLEQ 87
EP G R RDHDR+H RR R RR ++R V RL +
Sbjct: 437 EPARHGDHHRHRQRIRDHDRLHPQRRFAEARGHRRQRRVDDRRVERLHE 485
>UniRef50_Q11DU5 Cluster: Cobalamin synthesis protein, P47K; n=1;
Mesorhizobium sp. BNC1|Rep: Cobalamin synthesis protein,
P47K - Mesorhizobium sp. (strain BNC1)
Length = 350
Score = 30.7 bits (66), Expect = 8.0
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 224 TLSGXXC-RAHDHGRD--HDRVHEDRRGLYLHRVSRIRR 117
TL+G C AHDH D H HED +G+ L + + R
Sbjct: 205 TLAGEQCGHAHDHDHDHEHHHHHEDFQGIALRHAAALPR 243
>UniRef50_Q1RU93 Cluster: RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase; n=1; Medicago
truncatula|Rep: RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase - Medicago
truncatula (Barrel medic)
Length = 1246
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 185 RDHDRVHEDRRGLYLHRVSRIRRENRHVHRLEQRPPLLND 66
RD +H DR Y HR+S++R + L+ ++ D
Sbjct: 355 RDQRFIHGDRNTAYFHRISKVRATKNTISFLQDGDAVITD 394
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,980,332
Number of Sequences: 1657284
Number of extensions: 2723208
Number of successful extensions: 8498
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8339
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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