Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021717X
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   2.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   8.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   8.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   8.8  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 188 GRDHDRVHEDRRGLYLH 138
           G+D   VH  RRGL LH
Sbjct: 14  GQDKHMVHWFRRGLRLH 30


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 277 VCRSFXRDKTAECGDRN 227
           +C+SF +  ++ CG+ N
Sbjct: 35  LCQSFRKQNSSSCGNGN 51


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +2

Query: 227 VPVTTLGRLVAXERSTNSRAFTCFL 301
           VPV    R  A  RST  R F   +
Sbjct: 291 VPVFAAARFYAINRSTIFRMFNAIV 315


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +2

Query: 227 VPVTTLGRLVAXERSTNSRAFTCFL 301
           VPV    R  A  RST  R F   +
Sbjct: 291 VPVFAAARFYAINRSTIFRMFNAIV 315


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +2

Query: 227 VPVTTLGRLVAXERSTNSRAFTCFL 301
           VPV    R  A  RST  R F   +
Sbjct: 611 VPVFAAARFYAINRSTIFRMFNAIV 635


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,894
Number of Sequences: 336
Number of extensions: 601
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)