SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021717X
         (359 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17206-1|CAA35078.1|  221|Homo sapiens protein ( Human mRNA for ...    48   7e-06
BC106060-1|AAI06061.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC105985-1|AAI05986.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC103756-1|AAI03757.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC075830-1|AAH75830.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC073966-1|AAH73966.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC071924-1|AAH71924.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC071923-1|AAH71923.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC071922-1|AAH71922.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC071673-1|AAH71673.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC068051-1|AAH68051.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC066321-1|AAH66321.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC032129-1|AAH32129.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC026177-1|AAH26177.1|  172|Homo sapiens MGC27348 protein protein.     48   7e-06
BC025677-1|AAH25677.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC023541-1|AAH23541.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC021545-1|AAH21545.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC018993-1|AAH18993.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC016951-1|AAH16951.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC016178-1|AAH16178.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC012354-1|AAH12354.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC010165-1|AAH10165.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC008862-1|AAH08862.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC006559-1|AAH06559.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC001795-1|AAH01795.1|  293|Homo sapiens ribosomal protein S2 pr...    48   7e-06
AB082925-1|BAC16801.1|  233|Homo sapiens ribosomal protein S2 pr...    48   7e-06
AB065089-1|BAB93526.1|  203|Homo sapiens ribosomal protein S2 pr...    48   7e-06
BC054493-1|AAH54493.1|  516|Homo sapiens DALRD3 protein protein.       28   7.6  
BC047683-1|AAH47683.1|  543|Homo sapiens DALR anticodon binding ...    28   7.6  
BC032440-1|AAH32440.2|  543|Homo sapiens DALR anticodon binding ...    28   7.6  
AK001358-1|BAA91647.1|  138|Homo sapiens protein ( Homo sapiens ...    28   7.6  

>X17206-1|CAA35078.1|  221|Homo sapiens protein ( Human mRNA for
           LLRep3. ).
          Length = 221

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 2   KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 32


>BC106060-1|AAI06061.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC105985-1|AAI05986.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC103756-1|AAI03757.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC075830-1|AAH75830.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC073966-1|AAH73966.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC071924-1|AAH71924.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC071923-1|AAH71923.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC071922-1|AAH71922.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC071673-1|AAH71673.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC068051-1|AAH68051.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC066321-1|AAH66321.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC032129-1|AAH32129.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC026177-1|AAH26177.1|  172|Homo sapiens MGC27348 protein protein.
          Length = 172

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 2   KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 32


>BC025677-1|AAH25677.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC023541-1|AAH23541.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC021545-1|AAH21545.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC018993-1|AAH18993.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC016951-1|AAH16951.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC016178-1|AAH16178.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC012354-1|AAH12354.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC010165-1|AAH10165.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC008862-1|AAH08862.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC006559-1|AAH06559.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC001795-1|AAH01795.1|  293|Homo sapiens ribosomal protein S2
           protein.
          Length = 293

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>AB082925-1|BAC16801.1|  233|Homo sapiens ribosomal protein S2
           protein.
          Length = 233

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 14  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 44


>AB065089-1|BAB93526.1|  203|Homo sapiens ribosomal protein S2
           protein.
          Length = 203

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +1

Query: 265 KIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
           KI  LE IYLFSLPI+E EIID FLG SL D
Sbjct: 74  KIKSLEEIYLFSLPIKESEIIDFFLGASLKD 104


>BC054493-1|AAH54493.1|  516|Homo sapiens DALRD3 protein protein.
          Length = 516

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 228 FLSPHSAVLSRXKDRQTREHLL 293
           FL+PH A+ +R  D Q  EHLL
Sbjct: 40  FLAPHRALQARFDDGQVPEHLL 61


>BC047683-1|AAH47683.1|  543|Homo sapiens DALR anticodon binding
           domain containing 3 protein.
          Length = 543

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 228 FLSPHSAVLSRXKDRQTREHLL 293
           FL+PH A+ +R  D Q  EHLL
Sbjct: 40  FLAPHRALQARFDDGQVPEHLL 61


>BC032440-1|AAH32440.2|  543|Homo sapiens DALR anticodon binding
           domain containing 3 protein.
          Length = 543

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 228 FLSPHSAVLSRXKDRQTREHLL 293
           FL+PH A+ +R  D Q  EHLL
Sbjct: 40  FLAPHRALQARFDDGQVPEHLL 61


>AK001358-1|BAA91647.1|  138|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10496 fis, clone NT2RP2000298. ).
          Length = 138

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 228 FLSPHSAVLSRXKDRQTREHLL 293
           FL+PH A+ +R  D Q  EHLL
Sbjct: 40  FLAPHRALQARFDDGQVPEHLL 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,211,745
Number of Sequences: 237096
Number of extensions: 404801
Number of successful extensions: 883
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -