Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021717X
(359 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 52 3e-07
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 52 3e-07
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 52 3e-07
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 52 3e-07
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 52 3e-07
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 28 4.1
AY113334-1|AAM29339.1| 370|Drosophila melanogaster AT31172p pro... 28 4.1
AE014298-799|AAF46085.1| 370|Drosophila melanogaster CG15767-PA... 28 4.1
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 28 4.1
AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA... 27 9.5
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 256 RXXKIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
R KI LE IYL+SLPI+EFEIID FLG SL D
Sbjct: 54 REGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKD 87
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 209 EXQIEWVPVTTLGRLV 256
E EWVPVT LGRLV
Sbjct: 38 EDSKEWVPVTKLGRLV 53
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 256 RXXKIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
R KI LE IYL+SLPI+EFEIID FLG SL D
Sbjct: 54 REGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKD 87
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 209 EXQIEWVPVTTLGRLV 256
E EWVPVT LGRLV
Sbjct: 38 EDSKEWVPVTKLGRLV 53
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 256 RXXKIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
R KI LE IYL+SLPI+EFEIID FLG SL D
Sbjct: 54 REGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKD 87
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 209 EXQIEWVPVTTLGRLV 256
E EWVPVT LGRLV
Sbjct: 38 EDSKEWVPVTKLGRLV 53
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 256 RXXKIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
R KI LE IYL+SLPI+EFEIID FLG SL D
Sbjct: 54 REGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKD 87
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 209 EXQIEWVPVTTLGRLV 256
E EWVPVT LGRLV
Sbjct: 38 EDSKEWVPVTKLGRLV 53
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 256 RXXKIDKLESIYLFSLPIREFEIIDLFLGPSLND 357
R KI LE IYL+SLPI+EFEIID FLG SL D
Sbjct: 54 REGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKD 87
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 209 EXQIEWVPVTTLGRLV 256
E EWVPVT LGRLV
Sbjct: 38 EDSKEWVPVTKLGRLV 53
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 206 CRAHDHGRDHDRVHEDRRGLYLHRVSRIRREN-RHVHRLEQRPPLLN 69
C H D R+H ++GL + V + REN VH + ++ LLN
Sbjct: 361 CTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AY113334-1|AAM29339.1| 370|Drosophila melanogaster AT31172p
protein.
Length = 370
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -1
Query: 185 RDHDRVHEDRRGLYLHRVSRIRRENRHVHRLEQRPPLLN 69
R H RV R LYL R+S R VH+ RPPL+N
Sbjct: 23 RHHRRVQLSRNKLYLQRLS---RATSLVHK---RPPLMN 55
>AE014298-799|AAF46085.1| 370|Drosophila melanogaster CG15767-PA
protein.
Length = 370
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -1
Query: 185 RDHDRVHEDRRGLYLHRVSRIRRENRHVHRLEQRPPLLN 69
R H RV R LYL R+S R VH+ RPPL+N
Sbjct: 23 RHHRRVQLSRNKLYLQRLS---RATSLVHK---RPPLMN 55
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 206 CRAHDHGRDHDRVHEDRRGLYLHRVSRIRREN-RHVHRLEQRPPLLN 69
C H D R+H ++GL + V + REN VH + ++ LLN
Sbjct: 327 CTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>AE014134-733|AAO41157.1| 579|Drosophila melanogaster CG33003-PA
protein.
Length = 579
Score = 26.6 bits (56), Expect = 9.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1
Query: 197 HDHGRDHDRVHEDRRGLY 144
HDH DHD VH+ Y
Sbjct: 413 HDHAPDHDHVHDHHHDHY 430
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,621,040
Number of Sequences: 53049
Number of extensions: 135457
Number of successful extensions: 1802
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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