Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021717X
         (359 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   1.9  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    22   1.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   1.9  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    22   1.9  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   1.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   1.9  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    21   4.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   5.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   5.9  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 264 KDRQTREHLLVFFT 305
           K+ QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 264 KDRQTREHLLVFFT 305
           K+ QTREH L+ FT
Sbjct: 56  KNGQTREHALLAFT 69


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 167 HEDRRGLYLHRVSRIR 120
           HED+RG Y   ++ IR
Sbjct: 495 HEDKRGCYQLAINHIR 510


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 264 KDRQTREHLLVFFT 305
           K+ QTREH L+ FT
Sbjct: 72  KNGQTREHALLAFT 85


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 264 KDRQTREHLLVFFT 305
           K+ QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 167 HEDRRGLYLHRVSRIR 120
           HED+RG Y   ++ IR
Sbjct: 585 HEDKRGCYQLAINHIR 600


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 143 LHRVSRIRRENRHVHRLEQRPPLLN 69
           L  ++R+RR  ++VH    + P+ N
Sbjct: 12  LTSLTRLRRHIQNVHTRPSKEPICN 36


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 231 LSPHSAVLSRXKDRQTREHLLVFFTNQRIRD 323
           LSPH   L   + R  R  L   FT+ ++++
Sbjct: 116 LSPHLLNLEVERWRPLRSRLSPIFTSGKLKE 146


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 258 RXKDRQTREHLLVFFTNQRIRDH*SLPRPV 347
           R   R TR+ ++    N RI DH  +  PV
Sbjct: 210 RTMHRLTRQVVVSSVANVRIADHRGVMPPV 239


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 258 RXKDRQTREHLLVFFTNQRIRDH*SLPRPV 347
           R   R TR+ ++    N RI DH  +  PV
Sbjct: 210 RTMHRLTRQVVVSSVANVRIADHRGVMPPV 239


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 158 RRGLYLHRVSRIRRENRHVHRLEQRPPLLND 66
           RRG   + + +IR   RH +  E +  L+ +
Sbjct: 137 RRGFVYYTMGQIREVARHFYHKELQIELVRE 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,935
Number of Sequences: 438
Number of extensions: 853
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)