Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021716
         (744 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   1.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   4.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   4.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.0  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 228 SQYINDRLLVCTKAFHGGPQ 169
           S Y N   L CT  F GGPQ
Sbjct: 6   SMYNNVSPLQCTSPFLGGPQ 25


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 45  KPPITFLYF*YKSSHLNRNGLSESSN 122
           + P+ F Y+ YK +H     +S +SN
Sbjct: 433 RQPVWFYYYTYKGAHSISEIMSGTSN 458


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 45  KPPITFLYF*YKSSHLNRNGLSESSN 122
           + P+ F Y+ YK +H     +S +SN
Sbjct: 433 RQPVWFYYYTYKGAHSISEIMSGTSN 458


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
 Frame = +2

Query: 560 LIVVSGAKGARADEAPADPERARELAQELYDA----------GEGQVGDRRGGLQQNL 703
           L+V+S +        P  PE++     + Y             +GQ+    GG+QQN+
Sbjct: 640 LVVISSSNPLNVPYGPVIPEQSLTYQDQQYQVVSVEQYQQLKEQGQISQVGGGIQQNV 697


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,338
Number of Sequences: 438
Number of extensions: 4447
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)