Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021716
(744 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to calcium-b... 54 8e-08
At5g12380.1 68418.m01456 annexin, putative similar to annexin [F... 50 2e-06
At1g35720.1 68414.m04440 annexin 1 (ANN1) identical to annexin (... 44 1e-04
At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin (... 44 1e-04
At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to ca... 41 0.001
At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to an... 41 0.001
At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to ca... 39 0.004
At5g60170.1 68418.m07543 RNA recognition motif (RRM)-containing ... 31 0.61
At4g37850.1 68417.m05354 basic helix-loop-helix (bHLH) family pr... 30 1.4
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 30 1.9
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 30 1.9
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 30 1.9
At2g34880.1 68415.m04282 transcription factor jumonji (jmj) fami... 29 2.5
At2g41620.1 68415.m05143 nucleoporin interacting component famil... 29 3.3
At3g57350.1 68416.m06384 nucleoporin interacting component-relat... 29 4.3
At2g03505.1 68415.m00310 glycosyl hydrolase family protein 17 si... 29 4.3
At1g76830.1 68414.m08941 F-box family protein contains F-box dom... 29 4.3
At5g17880.1 68418.m02097 disease resistance protein (TIR-NBS-LRR... 28 5.7
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 28 5.7
At3g08670.1 68416.m01007 expressed protein 28 5.7
At5g37050.1 68418.m04444 hypothetical protein hypothetical prote... 28 7.5
At3g08505.2 68416.m00987 zinc finger (CCCH-type/C3HC4-type RING ... 28 7.5
At3g08505.1 68416.m00986 zinc finger (CCCH-type/C3HC4-type RING ... 28 7.5
At5g11490.1 68418.m01341 adaptin family protein similar to SP|Q9... 27 9.9
At2g07020.1 68415.m00803 protein kinase family protein contains ... 27 9.9
>At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to
calcium-binding protein annexin 5 [Arabidopsis thaliana]
GI:12667520
Length = 316
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 219 YIDYQVQHAAASISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEE---YLCQELH 389
+ D H A + + YG++L + ++ E G+FE V++ ++ E Y + L
Sbjct: 194 FTDRSRTHLVA-VRSTYRSMYGKELGKAIRDETRGNFEHVLLTILQCAENSCFYFAKALR 252
Query: 390 RCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 509
+ M+G+GTD+ L+ I+ TR + ++ I+ Y + Y + L
Sbjct: 253 KSMKGLGTDDTALIRIVVTRAEVDMQFIITEYRKRYKKTL 292
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 249 ASISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTL 428
A I Q + ++ DL + L SEL GH + ++ M E L R + G TD +
Sbjct: 47 ALIEQEYETKFSDDLRKRLHSELHGHLKKAVLLWMPEAVERDASILKRSLRGAVTDHKAI 106
Query: 429 VEILCTRTKPEIAAIVDTYERLY 497
EI+CTR+ ++ I Y +
Sbjct: 107 AEIICTRSGSQLRQIKQVYSNTF 129
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 160 AAALRAAMKGFGTDEQAIIDILTTRSNMQRQ 252
A ALR +MKG GTD+ A+I I+ TR+ + Q
Sbjct: 248 AKALRKSMKGLGTDDTALIRIVVTRAEVDMQ 278
Score = 34.3 bits (75), Expect = 0.087
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Frame = +3
Query: 255 ISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTP-----PE------EYLCQELHRCME 401
I Q ++ +G L ED++SE G+ + V++A + PE E + L +
Sbjct: 121 IKQVYSNTFGVKLEEDIESEASGNHKRVLLAYLNTTRYEGPEIDNASVENDARTLKSAVA 180
Query: 402 GMG-TDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 509
+D+ TL++I R++ + A+ TY +Y + L
Sbjct: 181 RKHKSDDQTLIQIFTDRSRTHLVAVRSTYRSMYGKEL 217
>At5g12380.1 68418.m01456 annexin, putative similar to annexin
[Fragaria x ananassa] GI:6010777, annexin p33 [Zea mays]
GI:6272285; contains Pfam profile PF00191: Annexin
Length = 316
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Frame = +1
Query: 121 TVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQ----RQAYHRPSHESM 282
T+V P+F+ VEDA ++AA +G+GT+E AII IL R+ Q RQAY HE +
Sbjct: 3 TIVSPPHFSPVEDAENIKAACQGWGTNENAIISILGHRNLFQRKLIRQAYQEIYHEDL 60
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/85 (35%), Positives = 39/85 (45%)
Frame = +3
Query: 255 ISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVE 434
I QA+ Y DLI LKSEL G+FE I + P E + ++ D LVE
Sbjct: 48 IRQAYQEIYHEDLIHQLKSELSGNFERAICLWVLDPPERDALLANLALQKPIPDYKVLVE 107
Query: 435 ILCTRTKPEIAAIVDTYERLYDRPL 509
I C R+ ++ A Y LY L
Sbjct: 108 IACMRSPEDMLAARRAYRCLYKHSL 132
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 279 YGRDLIEDLKSELGGHFEDVI---VALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTR 449
YG + +DL + + + + + P Y + L + +GTDED L ++ TR
Sbjct: 211 YGTSITKDLLNHPTNEYLSALRAAIRCIKNPTRYYAKVLRNSINTVGTDEDALNRVIVTR 270
Query: 450 TKPEIAAIVDTY 485
+ ++ I Y
Sbjct: 271 AEKDLTNITGLY 282
>At1g35720.1 68414.m04440 annexin 1 (ANN1) identical to annexin
(AnnAt1) [Arabidopsis thaliana] GI:4959106
Length = 317
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +1
Query: 154 EDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAYHRPSHESMEEISLKT 303
+DA LR A +G+GT+E II IL RS QR+ + HE+ E LKT
Sbjct: 15 DDAEQLRTAFEGWGTNEDLIISILAHRSAEQRKVIRQAYHETYGEDLLKT 64
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +3
Query: 255 ISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVE 434
I QA+ YG DL++ L EL FE I+ P E + + + L+E
Sbjct: 49 IRQAYHETYGEDLLKTLDKELSNDFERAILLWTLEPGERDALLANEATKRWTSSNQVLME 108
Query: 435 ILCTRTKPEIAAIVDTYERLYDRPL 509
+ CTRT ++ Y Y + L
Sbjct: 109 VACTRTSTQLLHARQAYHARYKKSL 133
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Frame = +3
Query: 180 HERLWYRRASDH*YIDYQVQHAAASISQAFTREYGRDLIEDLKSELGGHFEDVIVALM-- 353
HE++ + +D I + A I+ F R E LKS G +D +AL+
Sbjct: 176 HEKIKDKHYNDEDVIRILSTRSKAQINATFNRYQDDHGEEILKSLEEGDDDDKFLALLRS 235
Query: 354 -----TPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 509
T PE Y L + GTDE L I+ TR + ++ I + Y+R PL
Sbjct: 236 TIQCLTRPELYFVDVLRSAINKTGTDEGALTRIVTTRAEIDLKVIGEEYQRRNSIPL 292
>At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin
(AnnAt2) [Arabidopsis thaliana] GI:4959108
Length = 317
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Frame = +3
Query: 180 HERLWYRRASDH*YIDYQVQHAAASISQA---FTREYGRDLIEDLKSELGGH----FEDV 338
HE++ + SD +I + A + + EYG + ++LK E +
Sbjct: 176 HEKVSEKSYSDDDFIRILTTRSKAQLGATLNHYNNEYGNAINKNLKEESDDNDYMKLLRA 235
Query: 339 IVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 509
++ +T PE++ + L + MGTDE L ++ TRT+ ++ I + Y+R PL
Sbjct: 236 VITCLTYPEKHFEKVLRLSINKMGTDEWGLTRVVTTRTEVDMERIKEEYQRRNSIPL 292
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 ISQAFTREYGRDLIEDLKSELGGHFEDVIVA-LMTPPEE--YLCQELHRCMEGMGTDEDT 425
I + Y DL++ L EL FE ++ + PPE YL +E + +
Sbjct: 49 IRSVYAATYNEDLLKALDKELSSDFERAVMLWTLDPPERDAYLAKESTKMFT---KNNWV 105
Query: 426 LVEILCTRTKPEIAAIVDTYERLYDRPL 509
LVEI CTR E+ + Y+ Y + +
Sbjct: 106 LVEIACTRPALELIKVKQAYQARYKKSI 133
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 100 MAYQRAPTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQR 249
MA + P+ V +P +DA L A G+GT+E+ II IL R+ QR
Sbjct: 1 MASLKVPSNVPLPE----DDAEQLHKAFSGWGTNEKLIISILAHRNAAQR 46
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 357 PPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 509
P E ++LH+ G GT+E ++ IL R + + I Y Y+ L
Sbjct: 11 PLPEDDAEQLHKAFSGWGTNEKLIISILAHRNAAQRSLIRSVYAATYNEDL 61
>At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to
calcium-binding protein annexin 6 [Arabidopsis thaliana]
GI:12667518
Length = 318
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Frame = +3
Query: 180 HERLWYRRASDH*YIDYQVQHAAASISQA---FTREYGRDLIEDLKSELGGHFEDVI--- 341
H+++ + +D I + A I+ F ++G + + LK + + ++
Sbjct: 178 HKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTA 237
Query: 342 VALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 509
+ +T PE+Y + L R + MGTDE L ++ TR + ++ I + Y R PL
Sbjct: 238 IKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPL 293
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 100 MAYQRAPTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQR 249
MA + P + +P ED+ L A KG+GT+E II IL R+ QR
Sbjct: 1 MASLKIPANIPLPE----EDSEQLHKAFKGWGTNEGMIISILAHRNATQR 46
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 360 PEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 509
PEE ++LH+ +G GT+E ++ IL R + + I Y Y++ L
Sbjct: 13 PEED-SEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDL 61
>At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to
annexin (AnnAt3) [Arabidopsis thaliana] GI:6503082;
contains Pfam profile PF00191: Annexin
Length = 321
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +3
Query: 237 QHAAASISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTD 416
Q I ++F YG+DLI+ L SEL G F +V+ P E + +++ +
Sbjct: 43 QSQRRKIRESFREIYGKDLIDVLSSELSGDFMKAVVSWTYDPAERDARLVNKILNKEKKK 102
Query: 417 ED-----TLVEILCTRTKPEIAAIVDTYERLYDRPL 509
+ +VEI CT + + A+ Y L+D L
Sbjct: 103 KSLENLKVIVEISCTTSPNHLIAVRKAYCSLFDSSL 138
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +1
Query: 100 MAYQRAPTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAYHRPSHES 279
MA R P V P +D+ L+ A++G+GTDE+AII +L R QR R ES
Sbjct: 1 MATIRVPNEVPSP----AQDSETLKQAIRGWGTDEKAIIRVLGQRDQSQR----RKIRES 52
Query: 280 MEEI 291
EI
Sbjct: 53 FREI 56
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +3
Query: 336 VIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYD 500
V + + PE++ + + +EG GTDED+L + TR + ++ + Y +Y+
Sbjct: 240 VAIFCIDTPEKHFAKVVRDSIEGFGTDEDSLTRAIVTRAEIDLMKVRGEYFNMYN 294
>At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to
calcium-binding protein annexin 7 [Arabidopsis thaliana]
GI:12667522
Length = 316
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 ISQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEE---YLCQELHRCMEGMGTDEDT 425
I + Y +DL+++L EL G FE ++ P E YL +E + +
Sbjct: 49 IRAVYAANYNKDLLKELDRELSGDFERAVMLWTFEPAERDAYLAKESTKMFT---KNNWV 105
Query: 426 LVEILCTRTKPEIAAIVDTYERLYDRPL 509
LVEI CTR+ E+ Y+ Y L
Sbjct: 106 LVEIACTRSALELFNAKQAYQARYKTSL 133
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Frame = +3
Query: 180 HERLWYRRASDH*YIDYQVQHAAASISQA---FTREYGRDLIEDLKSELGGHFEDVIVAL 350
HE++ + +D I + A IS + +G + + LK + + ++ A+
Sbjct: 176 HEKIKEKAYADDDLIRILTTRSKAQISATLNHYKNNFGTSMSKYLKEDSENEYIQLLKAV 235
Query: 351 ---MTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 509
+T PE+Y + L + + +GTDE L ++ TR + ++ I + Y R PL
Sbjct: 236 IKCLTYPEKYFEKVLRQAINKLGTDEWGLTRVVTTRAEFDMERIKEEYIRRNSVPL 291
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +1
Query: 100 MAYQRAPTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQR 249
MA + P V +P EDA L A KG+GT+E+ II IL R+ QR
Sbjct: 1 MASLKVPATVPLPE----EDAEQLYKAFKGWGTNERMIISILAHRNATQR 46
>At5g60170.1 68418.m07543 RNA recognition motif (RRM)-containing
protein low similarity to transcriptional repressor
Not4-Np [Homo sapiens] GI:6856207; contains
INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA
recognition motif)
Length = 944
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 603 RRPTPSGPASSRRSCTTPGKAKWGTDEEVFNRILAHES 716
R PSG SS RS P A WGT + + + ++ S
Sbjct: 245 RYSPPSGSGSSSRSTALPAAASWGTHQSLATSVTSNGS 282
>At4g37850.1 68417.m05354 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 328
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 411 TDEDTLVEILCTRTKPEIAAIVDTYERLY 497
+DED L++ILC + K +A I+ E+L+
Sbjct: 254 SDEDVLIKILCEKQKGHLAKIMAEIEKLH 282
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 588 PAQTRRRPTPSGPASSRRSCTTPGKAK 668
PA +RRR +PS PA RRS + P + +
Sbjct: 304 PAPSRRRRSPSPPARRRRSPSPPARRR 330
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 588 PAQTRRRPTPSGPASSRRSCTTPGKAK 668
P RRR +PS PA RRS + P + +
Sbjct: 363 PPPARRRRSPSPPARRRRSPSPPARRR 389
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 496 TTARCRAHVLRDVGRLPPPPDTHC 567
T C+ H +PPPP THC
Sbjct: 368 TCHNCKQHFQAPAALVPPPPQTHC 391
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 100 MAYQRAPTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIID 219
M ++ +V N N+ EDA A A+KGF ++ I+D
Sbjct: 463 MDKRKGSALVNQSNGNSTEDAVAAEPAVKGFNFRDERIMD 502
>At2g34880.1 68415.m04282 transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein
contains Pfam domains, PF02375: jmjN domain, PF02373:
jmjC domain and PF02928: C5HC2 zinc finger
Length = 806
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +1
Query: 67 IFDTNPRILTEMAYQRAPTVV---GVPNFNAVEDA 162
+FD P +L E+ Q +PT++ GVP + AV++A
Sbjct: 349 LFDEQPDLLHELVTQFSPTILKNEGVPVYRAVQNA 383
>At2g41620.1 68415.m05143 nucleoporin interacting component family
protein contains Pfam profile PF04097: Nucleoporin
interacting component
Length = 861
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Frame = +3
Query: 234 VQHAAASISQAFTREYGRD------LIEDLKS-ELGGHFEDVIVALMTPPEEYLCQELH 389
+++ A S S A TR R+ L DLKS EL FEDV A T EEYL Q++H
Sbjct: 52 LRNEAPSQSIAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYL-QQVH 109
>At3g57350.1 68416.m06384 nucleoporin interacting component-related
contains weak hit to Pfam profile PF04097: Nucleoporin
interacting component
Length = 875
Score = 28.7 bits (61), Expect = 4.3
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Frame = +3
Query: 234 VQHAAASISQAFTREYGRD------LIEDLKS-ELGGHFEDVIVALMTPPEEYLCQELH 389
+++ A S S A TR R+ L DLKS EL FEDV A T EEYL Q++H
Sbjct: 65 LRNEAPSQSIAATRLLAREGINADQLSRDLKSFELKTTFEDVFPAETTSVEEYL-QQVH 122
>At2g03505.1 68415.m00310 glycosyl hydrolase family protein 17
similar to Glucan endo-1,3-beta-glucosidase precursor
(EC 3.2.1.39) ((1-3)-beta- glucan endohydrolase)
((1-3)-beta-glucanase) (Beta-1,3- endoglucanase)
(Swiss-Prot:P52409) [Triticum aestivum]; similar to beta
1,3-glucanase (GI:924953) [Triticum aestivum]
Length = 168
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 426 GCLHPCPYPPCNGAAPGTGTPQGESSEP 343
GCL+P P G P TGTP G + P
Sbjct: 103 GCLYPSS-PGSAGTTPTTGTPSGTQTFP 129
>At1g76830.1 68414.m08941 F-box family protein contains F-box domain
Pfam:PF00646
Length = 373
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 381 ELHRCMEGMGTDEDTLV-EILCTRTKPEIAAIVDT 482
E R + +G DE V ++LCTRTKPE +V T
Sbjct: 140 ETTRIITHLGYDEQKDVFKVLCTRTKPETPHLVLT 174
>At5g17880.1 68418.m02097 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1197
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Frame = +3
Query: 354 TPPEEYLCQELHRCMEG-----MGTDEDTLVEILCTRTKPE--IAAIVDT 482
+PP + +C+ L R EG ++D L++I C R++ E +A+++D+
Sbjct: 438 SPPGQSICKMLQRVWEGSYKALSQKEKDALLDIACFRSQDENYVASLLDS 487
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1756
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 49 RRSPFSIFDTNPRILTEMAYQRAPTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILT 228
++ +S+ +T+ Y V+G NFN E + + +D Q+I+ L+
Sbjct: 770 QKDQWSVLSGATEQVTDGGYTNDSAVIGNQNFNRQEQMESSKGDFHPSASDHQSILVSLS 829
Query: 229 TR 234
TR
Sbjct: 830 TR 831
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 28.3 bits (60), Expect = 5.7
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = -3
Query: 508 SGRSYNRSYVSTIAAISGLVLVQRISTRVSSSVPIPSMQRCSSWHRYSSGGVIRATITSS 329
SGRS + ++ A++S + S+R SSS + R SS R S+ IR +SS
Sbjct: 172 SGRSPSSILNTSSASVSSYIRPSSPSSRSSSSARPSTPTRTSSASRSSTPSRIRPGSSSS 231
Query: 328 K*PPNSDFRSSMRSLPYSR 272
SS S P SR
Sbjct: 232 SMDKARPSLSSRPSTPTSR 250
>At5g37050.1 68418.m04444 hypothetical protein hypothetical protein
T28J14.60 - Arabidopsis thaliana, PIR:T48483
Length = 165
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 148 AVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAYH 261
AV+DA A A+ K FG D+ I +IL T+ + YH
Sbjct: 129 AVQDAFAEAASSKVFGVDKSRIREILRTQKLLPSH-YH 165
>At3g08505.2 68416.m00987 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein contains zinc finger
C-x8-C-x5-C-x3-H type (and similar) domains,
Pfam:PF00642 and zinc finger, C3HC4 type (RING finger)
domain, Pfam:PF00097
Length = 323
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 423 CLHPCPYPPCNGAAPGTGTPQGESSEPRLH 334
C+HP YP C+ AA G P+G P +H
Sbjct: 98 CIHPREYPICSFAAAG-DCPRGNQC-PHMH 125
>At3g08505.1 68416.m00986 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein contains zinc finger
C-x8-C-x5-C-x3-H type (and similar) domains,
Pfam:PF00642 and zinc finger, C3HC4 type (RING finger)
domain, Pfam:PF00097
Length = 323
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 423 CLHPCPYPPCNGAAPGTGTPQGESSEPRLH 334
C+HP YP C+ AA G P+G P +H
Sbjct: 98 CIHPREYPICSFAAAG-DCPRGNQC-PHMH 125
>At5g11490.1 68418.m01341 adaptin family protein similar to
SP|Q9WV76 Adapter-related protein complex 4 beta 1
subunit (Beta subunit of AP- 4) {Mus musculus},
beta-adaptin Drosophila 1 {Drosophila melanogaster}
GI:434902; contains Pfam profile: PF01602 Adaptin N
terminal region
Length = 841
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 514 LGSGRSYNRSYVSTIAAISGLVLVQRISTRVSSSVPIPSMQRCSSWH 374
LGSG N SYV TI A++G++ + IS P+ + H
Sbjct: 140 LGSGLKDNNSYVRTI-AVTGVLKLYHISPSTCIDADFPATLKSLMLH 185
>At2g07020.1 68415.m00803 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 700
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -3
Query: 421 SSSVPIPSMQRCSSWHRYSSGGVIRATITSSK*PPNSDFRSSMRSLPYSRVKACDMLAAA 242
SSS S+ CSS+ +S+ ++S D S MR L DM +A
Sbjct: 250 SSSSEKQSIDLCSSYSAFSTSSQESGRLSSLSMYSQDDVESEMRRLKLELKYTMDMYNSA 309
Query: 241 C 239
C
Sbjct: 310 C 310
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,276,381
Number of Sequences: 28952
Number of extensions: 346675
Number of successful extensions: 1208
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -