Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021715
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051811-1|AAK93235.1|  662|Drosophila melanogaster LD32109p pro...    32   0.56 
AF262375-1|AAF72066.1|  662|Drosophila melanogaster RNA polymera...    32   0.56 
AF262374-1|AAF72065.1|  662|Drosophila melanogaster RNA polymera...    32   0.56 
AE014297-2339|AAF55409.2|  662|Drosophila melanogaster CG31256-P...    32   0.56 

>AY051811-1|AAK93235.1|  662|Drosophila melanogaster LD32109p
           protein.
          Length = 662

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +2

Query: 5   DEEYIDSLIMSADEAKHKTKLWNKVNAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184
           +++ +D  +++ +E+  K ++W  +NA Y                               
Sbjct: 440 NDDELDQYVLTEEESVAKLEMWKNLNAEYLQEQKERDERLAKEREEGKPERKKRKPRKKV 499

Query: 185 XXAINAATAGEAIEKMLAEKKM 250
                ++TAGEAIEKML EKK+
Sbjct: 500 IGP--SSTAGEAIEKMLQEKKI 519


>AF262375-1|AAF72066.1|  662|Drosophila melanogaster RNA polymerase
           III transcriptionfactor BRF protein.
          Length = 662

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +2

Query: 5   DEEYIDSLIMSADEAKHKTKLWNKVNAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184
           +++ +D  +++ +E+  K ++W  +NA Y                               
Sbjct: 440 NDDELDQYVLTEEESVAKLEMWKNLNAEYLQEQKERDERLAKEREEGKPERKKRKPRKKV 499

Query: 185 XXAINAATAGEAIEKMLAEKKM 250
                ++TAGEAIEKML EKK+
Sbjct: 500 IGP--SSTAGEAIEKMLQEKKI 519


>AF262374-1|AAF72065.1|  662|Drosophila melanogaster RNA polymerase
           III transcriptionfactor BRF protein.
          Length = 662

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +2

Query: 5   DEEYIDSLIMSADEAKHKTKLWNKVNAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184
           +++ +D  +++ +E+  K ++W  +NA Y                               
Sbjct: 440 NDDELDQYVLTEEESVAKLEMWKNLNAEYLQEQKERDERLAKEREEGKPERKKRKPRKKV 499

Query: 185 XXAINAATAGEAIEKMLAEKKM 250
                ++TAGEAIEKML EKK+
Sbjct: 500 IGP--SSTAGEAIEKMLQEKKI 519


>AE014297-2339|AAF55409.2|  662|Drosophila melanogaster CG31256-PA
           protein.
          Length = 662

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +2

Query: 5   DEEYIDSLIMSADEAKHKTKLWNKVNAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184
           +++ +D  +++ +E+  K ++W  +NA Y                               
Sbjct: 440 NDDELDQYVLTEEESVAKLEMWKNLNAEYLQEQKERDERLAKEREEGKPERKKRKPRKKV 499

Query: 185 XXAINAATAGEAIEKMLAEKKM 250
                ++TAGEAIEKML EKK+
Sbjct: 500 IGP--SSTAGEAIEKMLQEKKI 519


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,618,153
Number of Sequences: 53049
Number of extensions: 238110
Number of successful extensions: 768
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)