Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021714
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...   121   5e-28
AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical ...    84   9e-17
U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like pr...    31   1.2  
Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score =  121 bits (292), Expect = 5e-28
 Identities = 47/84 (55%), Positives = 67/84 (79%)
 Frame = +3

Query: 255 AAYCQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRF 434
           A YC F D LFP S+ +K++K+ + LE +++ N+K++Q  +K +GV+K++P+DKL+KG+F
Sbjct: 45  AGYCLFTDFLFPDSIQLKKVKWNSRLELDWLSNWKLVQTTWKNLGVEKVIPVDKLIKGKF 104

Query: 435 QDNFEFLQWFKKFFDANYGGAAYD 506
           QDNFEFLQWFKK FDANY G  YD
Sbjct: 105 QDNFEFLQWFKKLFDANYDGHEYD 128



 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = +1

Query: 139 VNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTG 255
           VNVY+T  +++NLSRH+ML WVNDCLQ++F KIE+L TG
Sbjct: 6   VNVYTTASSADNLSRHEMLMWVNDCLQAHFTKIEQLHTG 44


>AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical
           protein VW02B12L.3 protein.
          Length = 299

 Score = 84.2 bits (199), Expect = 9e-17
 Identities = 35/77 (45%), Positives = 54/77 (70%)
 Frame = +3

Query: 255 AAYCQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRF 434
           AAYCQ   +LF  ++ +K++KF    E + + N+K+L   +K +G+DK V ++K+ K +F
Sbjct: 42  AAYCQLTHLLF-NAINLKKVKFNPRSEPDVLNNWKVLTTTWKDLGIDKPVDVEKMKKAKF 100

Query: 435 QDNFEFLQWFKKFFDAN 485
           QDN EFLQWF KF++AN
Sbjct: 101 QDNMEFLQWFYKFYNAN 117



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 20/41 (48%), Positives = 32/41 (78%)
 Frame = +1

Query: 133 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTG 255
           M VNV+ + VT++ LSR + +AWVN+ L+S+F K+EE+ +G
Sbjct: 1   MVVNVFISAVTTDTLSRKEAVAWVNNLLKSHFTKVEEMASG 41


>U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like
           protein family protein20 protein.
          Length = 217

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 506 VICRTSIVGVKEFLEPLQKLKIILETTLHQFVN 408
           +IC      V  FL P++K+++I +T L  FVN
Sbjct: 136 IICTNCQSAVNAFLAPIKKVELITKTELTDFVN 168


>Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical
           protein W07G1.2 protein.
          Length = 363

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = -2

Query: 488 IVGVKEFLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDS 309
           ++G   +   L    ++ +  L  F +  YL+   +F   + YF +   +   ICLK   
Sbjct: 4   LIGNSSYFRVLTPTTVLHDHRLRGFPDNIYLIVYGIFHLLIMYFVLKCAY---ICLKIRV 60

Query: 308 FHW 300
           FHW
Sbjct: 61  FHW 63


>Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical
           protein T09E11.10 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = +3

Query: 273 MDMLFPGSVPMKR-IKFKTNL---EHEYIQNFKILQAGFKK 383
           M M+F G  P K  I F +++   +HEY++ ++I  A FK+
Sbjct: 288 MTMMFMGYEPTKEPILFSSHIPLKDHEYLEQYRIQMADFKE 328


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -2

Query: 470 FLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLY 345
           F+E L+ LK +L++ LH   N Y+L H  +   S   F +LY
Sbjct: 21  FVE-LRSLKNLLKSILHNIENDYFLAHQKVRLYSSHNFVMLY 61


>Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical
           protein F02D10.1 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = -3

Query: 628 PNGLGSSCDFGDRGDGFLSGSGPRGGRAPVPHGQTFSLRHASYAAPP 488
           P   G +   G  G G   G GP+G   P P GQ  S  +   A PP
Sbjct: 241 PGPAGPAGPDGQSGSGSAGGPGPKG--PPGPAGQPGSDGNPGTAGPP 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,885,337
Number of Sequences: 27780
Number of extensions: 392317
Number of successful extensions: 1066
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)