Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021712
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57296| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_38402| Best HMM Match : DM (HMM E-Value=6.1e-19) 49 3e-06
SB_3737| Best HMM Match : DM (HMM E-Value=6.1e-19) 49 3e-06
SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_47861| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_22508| Best HMM Match : DM (HMM E-Value=8.1e-10) 37 0.020
SB_36522| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11) 34 0.14
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 32 0.56
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 31 0.75
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 31 0.75
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71) 31 0.99
SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 30 2.3
SB_27637| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 30 2.3
SB_54589| Best HMM Match : Extensin_2 (HMM E-Value=0.0081) 29 3.0
SB_10026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_24674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 4.0
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_23104| Best HMM Match : DUF947 (HMM E-Value=0.098) 28 7.0
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 28 7.0
SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6) 28 7.0
SB_6040| Best HMM Match : DUF947 (HMM E-Value=0.098) 28 7.0
SB_51494| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 28 7.0
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_16553| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_3277| Best HMM Match : KH_1 (HMM E-Value=4.3e-30) 28 9.2
SB_10374| Best HMM Match : Fibrinogen_BP (HMM E-Value=2.2) 28 9.2
>SB_57296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3
Query: 126 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCKSAAL 269
SE + + R+P CARCRNH + LKGHKRYC+++ CTC +L
Sbjct: 2 SESASGDENLIRSP-RCARCRNHGIVSYLKGHKRYCQWKDCTCTKCSL 48
>SB_38402| Best HMM Match : DM (HMM E-Value=6.1e-19)
Length = 118
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 168 PNCARCRNHRLKIELKGHKRYCKYQHCTCKSAAL 269
P CARCRNH + LKGHK YC+++ C C L
Sbjct: 12 PKCARCRNHGVCSSLKGHKYYCRWRDCLCTKCLL 45
>SB_3737| Best HMM Match : DM (HMM E-Value=6.1e-19)
Length = 312
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 168 PNCARCRNHRLKIELKGHKRYCKYQHCTCKSAAL 269
P CARCRNH + LKGHK YC+++ C C L
Sbjct: 12 PKCARCRNHGVCSSLKGHKYYCRWRDCLCTKCLL 45
>SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3
Query: 174 CARCRNHRLKIELKGHKRYCKYQHCTCKSAAL 269
CARCRNH LKGHK YC++ CTC L
Sbjct: 23 CARCRNHGALSWLKGHKHYCRWWDCTCSKCLL 54
>SB_47861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 46.8 bits (106), Expect = 2e-05
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 117 EERSEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCKSAAL 269
EE + + + P C RCRNH + +L+GHK C+++ C C +
Sbjct: 3 EEALDSPLDKNHLSNRTPKCTRCRNHGILSDLRGHKHQCRFKDCACNECMI 53
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 371 PGLELDRPVP-PVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PG++ D+ P PV PR P P P G+A D +PG PG
Sbjct: 914 PGMDGDKGPPGPVDAGPRGPPGEPGPPGPFGAAGLDGMPGKPG 956
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 495 PGEPGTESQLAEPRERGADG--GIMGLRG-AFTTGGTGLSNSSPG 370
PG+PG + + +P RGADG G G G A TG G PG
Sbjct: 952 PGKPGAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGF-KGEPG 995
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGV 499
PPG+ D +P VV+ P P P G+ + +PG GV
Sbjct: 1405 PPGIRGDPGIPSVVRGP------PGKPGLSGNKGKEGLPGDDGV 1442
>SB_22508| Best HMM Match : DM (HMM E-Value=8.1e-10)
Length = 450
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 174 CARCRNHRLKIELKGHKRYCKYQHCTCKS 260
C +CR+H L+GHKR C Y C C S
Sbjct: 194 CRKCRSHGKITPLEGHKRNCPYIKCDCLS 222
>SB_36522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 189 NHRLKIELKGHKRYCKYQHCTCK 257
NH ++ ELKGHK C Y C C+
Sbjct: 267 NHGIRSELKGHKYNCPYSSCKCE 289
>SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11)
Length = 403
Score = 33.9 bits (74), Expect = 0.14
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 210 LKGHKRYCKYQHCTCKSAAL 269
LKGHK YC+++ CTC L
Sbjct: 34 LKGHKHYCRWRDCTCSKCQL 53
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 362 IQPPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 505
+ PP P PP P P PP P S PGSP SP
Sbjct: 682 VPPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSP 729
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPG+ D +P VV+ P P G D VPG PG
Sbjct: 9 PPGIRGDPGIPSVVRGPPGKPGLPGNKGKEGLPGDDGVPGQPG 51
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPG ++ P PP + P P PP LG PG+PG
Sbjct: 117 PPGPQMP-PGPPGLPGPPGPAGPPGTNGELGPPGDVGPPGNPG 158
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPG D PP + P+ P +PP P G+ PG+ G
Sbjct: 187 PPGPPGDMG-PPGLPGPQGPQMPPGPPGLPGAPGPKGPPGTNG 228
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPG ++ PP + P P PPS P G + PG G
Sbjct: 697 PPG-QIGEMGPPGLPGPPGPASPPSPPGPPGPPGPNGPPGPNG 738
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPGL P PP +P SP PP P G + G PG
Sbjct: 876 PPGL----PGPPGPASPPSPPGPPGPPGPKGPPGPNGCLGPPG 914
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPY 508
PPG ++ P PP + P PP LG PG+PG Y
Sbjct: 287 PPGPQMP-PGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGY 332
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPY 508
PPG ++ P PP + P PP LG PG+PG Y
Sbjct: 372 PPGPQMP-PGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGY 417
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPGL P PP +P SP PP P G + G PG
Sbjct: 791 PPGL----PGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPG 829
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPG EL PP P P +PP P G PG+ G
Sbjct: 102 PPG-ELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNG 143
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPG D PP + P P +PP P G+ PG+ G
Sbjct: 272 PPGPPGDMG-PPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNG 313
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPG L PP + P P +PP P G+ PG+ G
Sbjct: 357 PPG-PLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNG 398
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
PPGL P PP +P SP PP P G + G PG
Sbjct: 706 PPGL----PGPPGPASPPSPPGPPGPPGPNGPPGPNGPLGPPG 744
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 31.5 bits (68), Expect = 0.75
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +2
Query: 365 QPPGLELDRPVPPVVKAPRSPMIP--PSAPRSLGSASCDSVPGSPGVSPYLHRRQCLRRQ 538
+PP L D PP AP P +P P P S G + + P P + P LR+
Sbjct: 455 EPPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSPKQPPLPPKHSNGPPLRQT 514
Query: 539 P 541
P
Sbjct: 515 P 515
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 31.5 bits (68), Expect = 0.75
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 374 GLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGV 499
G+EL+ + PV+++P S + PP P G + D G+PG+
Sbjct: 474 GMELNDTLTPVLRSPTSLIGPPGPP---GLCNVDVCKGTPGI 512
>SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71)
Length = 361
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +3
Query: 132 PGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCKSAALPQT 278
P +GVP AP +K +G KR CK Q C+C A LP T
Sbjct: 291 PTTVPTGVPLAPDEILPL----IKCNYEGDKR-CKTQRCSCSRARLPCT 334
>SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 392 PVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYLHRRQCLRRQPCHH 550
P P + P P S P+S + S + P +PG YL+R+ C Q HH
Sbjct: 215 PKPNNPSSNPKPNNPSSNPKS-NNPSSNPKPNNPGT--YLNRKSCSESQQIHH 264
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -2
Query: 495 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSSPG 370
PGEPGT+ +P + G G G G GA T G PG
Sbjct: 144 PGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQPG 187
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 495 PGEPGTESQLAEPRERGADGGIMGLRGA 412
PG PG + E E GAD G+ G RGA
Sbjct: 240 PGSPGADGDTGEAGEHGAD-GLKGDRGA 266
>SB_27637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = +1
Query: 265 PYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEGATQPHD 432
PY +G NGN+T +A GI ++ P T G+ + +D
Sbjct: 213 PYENDGDNDGHTNGNKTNTNGNETAVHNVGIASSLPELAASDDVTAEGKTVSDAND 268
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -2
Query: 495 PGEPGTESQLAEPRERGADG--GIMGLRG-AFTTGGTGLS 385
PG PG + ERG DG G MG RG TG TGL+
Sbjct: 452 PGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLT 491
>SB_54589| Best HMM Match : Extensin_2 (HMM E-Value=0.0081)
Length = 667
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 495 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGT-GLSNSSPG 370
P PG+ ++ + RE G D + LRG FTTG + LSN+ G
Sbjct: 571 PPIPGSPTKSIQSRE-GGDKELKPLRGLFTTGSSPPLSNAMMG 612
>SB_10026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 265 PYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG 387
P +R A N + + PG+G+ C+ AG + G GVG
Sbjct: 352 PCQRSADQNPYSTQRDSQPGAGKYPCSDAGCHRHSMGNGVG 392
>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 286 GNGKANGNQTGPGSGRSACACAGIRNTAPGAG 381
G G NG G G G C C G + G G
Sbjct: 40 GGGGGNGGGAGNGVGAGGCGCGGGNDGGNGGG 71
>SB_24674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 578
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +3
Query: 201 KIELKGHKRYCKYQHCTCKSAALPQTGSG*WQSKRQSDGPRLRTKRVRVR 350
++ ++GH++ Y+ T K P G W S+RQ++ + + + +R
Sbjct: 421 ELSIQGHQKSKIYEQTTIKETG-PNEGRDRWISRRQTENEKTQRHNMEIR 469
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSV 481
PPG P PP P +P PP+ P G + D +
Sbjct: 183 PPGAPAAPPAPPFGGPPSAPPPPPAPPVGGGGSLADQL 220
>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 350 LELGIQPPG---LELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
+ELG+ P LE+ P + A P PP+ P+ S S D SPG
Sbjct: 236 VELGVIPKEDCVLEMVSPKKTITPAQVKPSPPPTKPKPARSGSVDHGTPSPG 287
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +2
Query: 365 QPPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYL 511
+PP P PP PR P PP +P +A P P + P L
Sbjct: 210 RPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTL 258
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 398 PPVVKAPRSPMIP--PSAPRSLGSASCDSVPGSPG 496
P P +P P PSAP + G+ S S P +PG
Sbjct: 491 PSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPG 525
>SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 144 SSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCKSAALPQTGSG 287
S+ + R P C CR H ++ E+ G K+ + C + G G
Sbjct: 46 SAQIWRGVPTCIPCRLHHVQKEIAGAKQLHTKNNAICTGKEAKKQGKG 93
>SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 818
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 386 DRPVPPVVKAPRSPMIPPSAPRSLGSAS 469
D P P++ P IPP +P SL +AS
Sbjct: 510 DNPGSPLIPTPSFEPIPPPSPTSLANAS 537
>SB_23104| Best HMM Match : DUF947 (HMM E-Value=0.098)
Length = 807
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 144 SSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCKSAALPQTGSG 287
S+ + R P C CR H ++ E+ G K+ + C + G G
Sbjct: 75 SAQIWRGVPTCIPCRLHHVQKEIAGAKQLHTKNNTICTGKEAKKQGKG 122
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAP 448
PPG+++ P+PP + P+ P PP P
Sbjct: 558 PPGVDIPPPLPP-SEDPKPPPPPPEPP 583
>SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6)
Length = 287
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 419 VAPSPLVVQAYPTPAPGAVFLIPAHAHALRPEP 321
V+P P Q +P PA V IPAHA + P P
Sbjct: 218 VSPIPAHTQVHPIPAHAQVDPIPAHAQ-VNPIP 249
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 419 VAPSPLVVQAYPTPAPGAVFLIPAHA 342
V P+P Q PTPA V IPAHA
Sbjct: 164 VNPTPEHAQVNPTPAHAQVNPIPAHA 189
>SB_6040| Best HMM Match : DUF947 (HMM E-Value=0.098)
Length = 405
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 144 SSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCKSAALPQTGSG 287
S+ + R P C CR H ++ E+ G K+ + C + G G
Sbjct: 97 SAQIWRGVPTCIPCRLHHVQKEIAGAKQLHTKNNTICTGKEAKKQGKG 144
>SB_51494| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 157
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = +2
Query: 371 PGLELDRPVPPV------VKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 505
P L+LD PVPP+ R PM A R LG + ++P SP
Sbjct: 101 PDLDLDLPVPPLETPRPKKTGKRQPMRKAKADRPLGPSPPSALPDLADFSP 151
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 495 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSSPGG 367
PG PGT+ + E+G I G +GA G G+ N P G
Sbjct: 723 PGTPGTKGEPGPTGEKGEVFRIKGEKGAKGQQG-GIGNPGPPG 764
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 495 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSSPGG 367
PG PG + P E+G G+ G ++T+GG G P G
Sbjct: 760 PGPPGLRGDVGPPGEQGPT-GVPG--ESWTSGGVGQIKQGPPG 799
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 365 QPPGLELDRPVPPVVKAPRSPMIPPS-APRSLGSASCDSVPG--SPG 496
QPPG+ PP P PM PPS P S+G S P +PG
Sbjct: 948 QPPGIMQ----PPTSIPPSQPMAPPSFPPSSMGGFPPSSQPSMYNPG 990
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 27.9 bits (59), Expect = 9.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 219 HKRYCKYQHCTCKSAAL 269
HKRYC+++ C C L
Sbjct: 358 HKRYCRWRDCNCAQCTL 374
>SB_16553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 921
Score = 27.9 bits (59), Expect = 9.2
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -1
Query: 526 ALTAVEVW*YPR*TRYGVTARRAQGAWCRRRYHGAAWRLHHWWYRPIQLQPRGLYS*FQR 347
A VE W Y R T G RR G+W R GA R+ W+Y P R + S + R
Sbjct: 805 ATRRVESW-YDRPT--GGATRRV-GSWYYRPTGGATRRVGSWYYGPTGGATRRVESWYDR 860
Query: 346 T---RTRFVLSLGP 314
T F+++ P
Sbjct: 861 VTGGATGFIVTREP 874
>SB_3277| Best HMM Match : KH_1 (HMM E-Value=4.3e-30)
Length = 379
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 504 GDTPGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSS 376
G P +PG + +GA G I+G +G++ TG +S +S
Sbjct: 182 GPPPPQPGPITSHTMTILKGAVGSIIGQKGSYITGIRQMSGAS 224
>SB_10374| Best HMM Match : Fibrinogen_BP (HMM E-Value=2.2)
Length = 707
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 152 RSSCPS*LCALPQSQAQDR 208
+SSCP+ CA+P S+A+ R
Sbjct: 219 KSSCPTQQCAIPSSEARSR 237
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,115,026
Number of Sequences: 59808
Number of extensions: 490259
Number of successful extensions: 2115
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2086
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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