Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021712
(745 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 33 0.26
At4g18570.1 68417.m02749 proline-rich family protein common fami... 32 0.46
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 31 0.81
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 31 0.81
At3g28840.1 68416.m03598 expressed protein 31 1.1
At4g31920.1 68417.m04535 two-component responsive regulator fami... 30 1.4
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 30 1.4
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 30 1.4
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 30 1.4
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 30 1.9
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 30 1.9
At2g02970.1 68415.m00249 nucleoside phosphatase family protein /... 30 1.9
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 29 2.5
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 29 3.3
At3g22070.1 68416.m02785 proline-rich family protein contains pr... 29 3.3
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 3.3
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 29 4.3
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 29 4.3
At4g32490.1 68417.m04625 plastocyanin-like domain-containing pro... 29 4.3
At2g20570.1 68415.m02402 golden2-like transcription factor (GLK1... 29 4.3
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 29 4.3
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 28 5.7
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 28 7.5
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 28 7.5
At1g14240.2 68414.m01686 nucleoside phosphatase family protein /... 28 7.5
At1g14240.1 68414.m01685 nucleoside phosphatase family protein /... 28 7.5
At5g38560.1 68418.m04662 protein kinase family protein contains ... 27 9.9
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 27 9.9
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 27 9.9
At1g48290.1 68414.m05394 expressed protein ; expression supporte... 27 9.9
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 9.9
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 505
PP P PP VK P P++ P P A C P +P P
Sbjct: 130 PPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPPP 175
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPY 508
PP + P PP VK P P + P P ++ + P +PY
Sbjct: 90 PPPPYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTPYTPPPPTPY 136
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYLH 514
PP L+ P P V KAP P PP P+SL AS V P V + H
Sbjct: 318 PPLLQQPPPPPSVSKAPPPPP-PPPPPKSLSIASA-KVRRVPEVVEFYH 364
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +1
Query: 286 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEGAT 420
G G G TG G+G G T G G G T +G G T
Sbjct: 145 GTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGT 189
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 286 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEG 414
G G G TG G+G G T G G G T +G G
Sbjct: 143 GTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTG 185
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 286 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEG 414
G G G TG G+G G T G G G T +G G
Sbjct: 188 GTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGGTGTGTGTG 230
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +1
Query: 286 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEGAT 420
G G G TG G+G G T G G G T +G G T
Sbjct: 145 GTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGT 189
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 286 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEG 414
G G G TG G+G G T G G G T +G G
Sbjct: 143 GTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTG 185
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 286 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEG 414
G G G TG G+G G T G G G T +G G
Sbjct: 188 GTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGGTGTGTGTG 230
>At3g28840.1 68416.m03598 expressed protein
Length = 391
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +1
Query: 280 AAGNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEGATQPHDTA 438
AAG A G T G+G + TA GAG TT+ + T TA
Sbjct: 238 AAGGSTAAGGTTASGAGTAGYGATAGGATASGAGTAAGGTTASDAGTAAGTTA 290
>At4g31920.1 68417.m04535 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 552
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 383 LDRPVPPVVKAPRSPMIPPSAPRSL-GSASCDSVPGSPGVSPY 508
++R P SPM+ PS L G+ S+P +PG SP+
Sbjct: 343 INRAFPSFTSQQNSPMVAPSNLLLLEGNPQSSSLPSNPGFSPH 385
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 365 QPPGLELDRPVPPVVKAPRSPMIPPSAPR 451
+PP + P PP VK P+ P + P P+
Sbjct: 38 KPPKHPVKPPKPPAVKPPKPPAVKPPTPK 66
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 365 QPPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 505
+PP P PP+VK P P PPS P+ + S P P P
Sbjct: 103 KPPTKPHPHPKPPIVKPPTKP--PPSTPKP-PTKPPPSTPKPPTTKP 146
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 392 PVPPVVKAPRSPMIPPSAPRSLGSASCDSV-PGSPGVSPYL 511
P PVV P SP++ P P GS + PG+PG +P++
Sbjct: 142 PRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPG-TPFI 181
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 392 PVPPVVKAPRSPMIPPSAPRSLGSASCDSV-PGSPGVSPYL 511
P PVV P SP++ P P GS + PG+PG +P++
Sbjct: 142 PRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPG-TPFI 181
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAP 448
PPG + RP PP+ P++P PPS P
Sbjct: 405 PPGPKGPRPPPPMSLGPKAPR-PPSGP 430
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAP 448
PPG + RP PP+ P++P PPS P
Sbjct: 405 PPGPKGPRPPPPMSLGPKAPR-PPSGP 430
>At2g02970.1 68415.m00249 nucleoside phosphatase family protein /
GDA1/CD39 family protein low similarity to SP|P55772
Ectonucleoside triphosphate diphosphohydrolase 1 (EC
3.6.1.5) (Ecto-apyrase) {Mus musculus}; contains Pfam
profile PF01150: GDA1/CD39 (nucleoside phosphatase)
family
Length = 555
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 159 RAPPNCARCRNHRLKIELKGHKRYCKYQHCTCKSAALPQ 275
+A N ++CR+ L I G+++ C YQHC+ S P+
Sbjct: 344 QAGGNYSQCRSAALTILQDGNEK-CSYQHCSIGSTFTPK 381
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 505
P L P PP+ +P SP PP + L S S P P SP
Sbjct: 50 PSSLSPSSP-PPLSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSP 94
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 386 DRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYLH 514
D P P P P P P S + +C P S G PY +
Sbjct: 38 DNPCQPNPSPPPPPSNPSPPPPSPTTTACPPPPSSSGGGPYYY 80
>At3g22070.1 68416.m02785 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 178
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -2
Query: 312 LIAVCFAITRCLS--AVRRHFYKCNADICSTACDP 214
++ V F I ++ +RRH + C+ D CS++ DP
Sbjct: 15 IVTVVFVIGLVVAFGVLRRHSHHCSGDYCSSSTDP 49
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 392 PVPPVVKAPRSPMIPPSAPRS---LGSASCDSVPGSPGVSPYLHRRQCLRRQPCH 547
P P P +P PP AP S + + S S+P +P +P H+R+ ++ H
Sbjct: 132 PPPAPASPPPAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHH 186
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 392 PVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSP 493
P PP + R+P PP P LG+ S P P
Sbjct: 776 PPPPPLGQTRAPSAPPPPPPKLGTKLSPSGPNVP 809
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +2
Query: 392 PVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 505
P P+V P P PPS P L VPG PG+ P
Sbjct: 340 PPVPIVNPPSLPPPPPSFPVPL-----PPVPGLPGIPP 372
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 362 IQPPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 505
+ PP P+PPV P P IPP P G +PG P +SP
Sbjct: 350 LPPPPPSFPVPLPPV---PGLPGIPP-VPLIPGIPPAPLIPGIPPLSP 393
>At4g32490.1 68417.m04625 plastocyanin-like domain-containing
protein
Length = 221
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -3
Query: 419 VAPSPLVVQ---AYPTPAPGAVFLIPAHAHALRPEPGP 315
++P+P+ V + P P PG + P+H+ L P PGP
Sbjct: 157 LSPAPIPVHKALSSPAPTPG---VDPSHSEVLAPAPGP 191
>At2g20570.1 68415.m02402 golden2-like transcription factor (GLK1)
identical to golden2-like transcription factor
GI:13311003 from [Arabidopsis thaliana]; contains Pfam
profile: PF00249 Myb-like DNA-binding domain
Length = 420
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 425 GCVAPSPLVVQAYPTPAPGAVFLIPAHAHALRP 327
G +AP+P + +P P P AV P H H RP
Sbjct: 243 GWLAPAPTL--GFPPPPPVAVAPPPVHHHHFRP 273
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 353 ELGIQPPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 496
E I PP P PV+ +P + P PRS+G + G PG
Sbjct: 221 EFPINPPR----NPGAPVIPRNPNPPVFPGNPRSMGPPGFPGIGGPPG 264
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 505
PP PP +P SP +PPS+ S + P S ++P
Sbjct: 141 PPSTPSTPSSPPSPPSPPSPSLPPSSLPPSASPPTNGTPDSETLTP 186
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 389 RPVPPVVKAPRSPMIPPSAP-----RSLGSASCDSVPGSPGVSP 505
+P PP + P SP PP P L AS +P PG P
Sbjct: 1109 QPPPPPLSPPPSPPPPPPPPSQSLTTQLSIASHHQIPFQPGFPP 1152
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +2
Query: 371 PGLELDRPVPPVVKAPRSP--MIPPSAPRSLGSASCDSVPGSPG 496
PG+ +P + P SP +P P S G S +PGSPG
Sbjct: 111 PGIPGIPGIPGLPGIPGSPGFRLPFPFPSSPGGGSIPGIPGSPG 154
>At1g14240.2 68414.m01686 nucleoside phosphatase family protein /
GDA1/CD39 family protein low similarity to nod factor
binding lectin-nucleotide phosphohydrolase [Dolichos
biflorus] GI:4868375; contains Pfam profile PF01150:
GDA1/CD39 (nucleoside phosphatase) family
Length = 479
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 150 GVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCKSAALP 272
G +A N ++CR+ + LK K C Y+HC+ S P
Sbjct: 315 GSLQAAGNFSKCRSATFAL-LKEGKENCLYEHCSIGSTFTP 354
>At1g14240.1 68414.m01685 nucleoside phosphatase family protein /
GDA1/CD39 family protein low similarity to nod factor
binding lectin-nucleotide phosphohydrolase [Dolichos
biflorus] GI:4868375; contains Pfam profile PF01150:
GDA1/CD39 (nucleoside phosphatase) family
Length = 483
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 150 GVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCKSAALP 272
G +A N ++CR+ + LK K C Y+HC+ S P
Sbjct: 319 GSLQAAGNFSKCRSATFAL-LKEGKENCLYEHCSIGSTFTP 358
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSP 493
PP + P PPVV +P PP +P + S +V SP
Sbjct: 48 PPPVVSSSPPPPVVSSPPPSSSPPPSPPVITSPP-PTVASSP 88
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAP---RSPMIPPSAPRSLGSASCDSVPGSPGVSPYLHRRQCLR-R 535
PP + P P V P +P PPS P GS P + R +C + R
Sbjct: 210 PPDVTPTPPTPSVPSPPDVTPTPPTPPSVPTPSGSPPYVPPPSDEEEAAGAKRVRCKKQR 269
Query: 536 QPCH 547
PC+
Sbjct: 270 SPCY 273
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 359 GIQPPGLELDRPVP-PVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYL 511
G PP L P P P + P M PP ++ A +PG PG+ P +
Sbjct: 133 GAMPPHGLLRYPSPYPTMVRPGFIMRPPGTIGAVQLAPRPLIPGMPGLRPVM 184
>At1g48290.1 68414.m05394 expressed protein ; expression supported
by MPSS
Length = 444
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 392 PVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSP 505
P PPVV+ P + PPSA SAS + P S + P
Sbjct: 12 PPPPVVEPPHVVVEPPSASIEPPSASIE--PPSVAIEP 47
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 368 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSP 493
P L + PP + P S + PPS PR S + P +P
Sbjct: 272 PDPLPSNSSSPPTLLPPSSVVSPPSPPRKSVSGPDNPSPNNP 313
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,450,890
Number of Sequences: 28952
Number of extensions: 325974
Number of successful extensions: 1703
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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