Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021711
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.036
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.58 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    25   0.77 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.77 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   1.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.036
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 503 CRAFVLFETKLYCSVSL 453
           CRAF++F T  YC+ SL
Sbjct: 302 CRAFIIFPTHFYCAFSL 318


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 331 CDDNMKTEDVPYQC 372
           C DNMK E VP +C
Sbjct: 715 CPDNMKLEKVPGEC 728


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +1

Query: 406 CISLNEQINEAMSDLHKLTEQYNFVSNKTNALHNRVSSYWL 528
           C S  EQ N+  S LH+L   Y  +      L N V SY L
Sbjct: 310 CASTCEQANDTPSILHELRNNYFHMD-----LENNVQSYSL 345


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 415 KKYIHFFYLLIVY 377
           + YIHFFY L++Y
Sbjct: 156 QNYIHFFYQLLLY 168


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 406 CISLNEQINEAMSDLHKLTEQYNFVSNKTNAL 501
           C S  EQ N+  S LH+L   Y  +  + N +
Sbjct: 310 CASTCEQANDTPSILHELRNNYFHMDLENNVI 341


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 129 YCCGNRLKIHLRHSTRTRGKRF 194
           YCC N   + LR     R K +
Sbjct: 161 YCCDNNFNVFLRQVFTCRCKDY 182


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 134 LWESSENPLAPLNSDQ 181
           +W+SSE+ L P +S +
Sbjct: 230 IWQSSESSLRPRSSQK 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,696
Number of Sequences: 336
Number of extensions: 3545
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)