Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021710
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 123 6e-28
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 122 1e-27
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 122 1e-27
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 122 1e-27
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 121 2e-27
AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open readi... 31 2.5
AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein pr... 31 3.3
AK057223-1|BAB71386.1| 379|Homo sapiens protein ( Homo sapiens ... 30 7.7
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 123 bits (296), Expect = 6e-28
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
T AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE FP P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEFPELP 151
Score = 84.2 bits (199), Expect = 3e-16
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 57.6 bits (133), Expect = 3e-08
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
+ PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 76 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 135
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 136 YAICSALAASALPALVMSKGHRIEEVPELP 165
Score = 82.6 bits (195), Expect = 1e-15
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = +2
Query: 68 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 247
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 248 GHQ 256
GHQ
Sbjct: 73 GHQ 75
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 160 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 198
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 122 bits (294), Expect = 1e-27
Identities = 56/90 (62%), Positives = 58/90 (64%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
++GH IE P P
Sbjct: 122 YAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 121 bits (292), Expect = 2e-27
Identities = 56/90 (62%), Positives = 57/90 (63%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKR 121
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
+GH IE P P
Sbjct: 122 YAICSALAASALPALVMPKGHRIEEVPELP 151
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 58.8 bits (136), Expect = 1e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 623
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVY 184
>AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 159
Score = 31.5 bits (68), Expect = 2.5
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN--MCRGGRMFAPTKPWRRW 405
RE+G W SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
>AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 489 SLNERWDAASSNGCRQGRSPLSEVDATVPTPPGL 388
+L +W S+G G SPLS A P PPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>AK057223-1|BAB71386.1| 379|Homo sapiens protein ( Homo sapiens
cDNA FLJ32661 fis, clone TESTI1000055, weakly similar to
HOMEOBOX PROTEIN SIX1. ).
Length = 379
Score = 29.9 bits (64), Expect = 7.7
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 449 QPLLLAASQRSFRLEDTLLKDSRASLGCSRQSPRDQQDQTGCHLPEAPQ 595
QPL+ A RL LL ++ +L C+R + +Q Q C L E Q
Sbjct: 40 QPLVTAILDSQLRLH--LLDNADVALACARVLDQQEQQQAACRLLEGCQ 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,259,805
Number of Sequences: 237096
Number of extensions: 1876181
Number of successful extensions: 5552
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5496
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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