Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021710
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 120 2e-27
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 120 2e-27
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 120 2e-27
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 120 2e-27
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 120 2e-27
BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p pro... 33 0.24
AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA... 33 0.24
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 31 0.97
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 31 0.97
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 31 0.97
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 31 0.97
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.7
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.7
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.7
AE013599-1641|AAO41395.1| 581|Drosophila melanogaster CG33007-P... 30 2.2
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 3.9
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 3.9
BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p pro... 29 5.1
AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA... 29 5.1
AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p pro... 29 6.8
AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p pro... 29 6.8
AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-P... 29 6.8
BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p pro... 28 9.0
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro... 28 9.0
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P... 28 9.0
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 28 9.0
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 120 bits (288), Expect = 2e-27
Identities = 55/90 (61%), Positives = 60/90 (66%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
Q++GH+I+ FP
Sbjct: 125 YALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK 626
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYK
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYK 188
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 120 bits (288), Expect = 2e-27
Identities = 55/90 (61%), Positives = 60/90 (66%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 3 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQRR 62
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
Q++GH+I+ FP
Sbjct: 63 YALVSAIAASGVPALVQSKGHVIDGVSEFP 92
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 617
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 88 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 120 bits (288), Expect = 2e-27
Identities = 55/90 (61%), Positives = 60/90 (66%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
Q++GH+I+ FP
Sbjct: 125 YALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK 626
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYK
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYK 188
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 120 bits (288), Expect = 2e-27
Identities = 55/90 (61%), Positives = 60/90 (66%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
Q++GH+I+ FP
Sbjct: 125 YALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK 626
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYK
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYK 188
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 120 bits (288), Expect = 2e-27
Identities = 55/90 (61%), Positives = 60/90 (66%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 435
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRR 124
Query: 436 XXXXXXXXXXXXXXXXQARGHIIERFPSFP 525
Q++GH+I+ FP
Sbjct: 125 YALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK 626
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYK
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYK 188
>BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p protein.
Length = 1248
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 395 GGVGTVASTSDSGERPWRQPLLLAASQRSFRLEDTLLKDSRASLGCSRQSPRDQQDQ 565
GG+ T+ +RP +QP L+ + T++ S + S+Q PR QQ Q
Sbjct: 1025 GGLTTLPQGLTLIQRPGQQPQLVQVQAAPGSTQRTIITQSNTAAAASQQQPRQQQQQ 1081
>AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA
protein.
Length = 1251
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 395 GGVGTVASTSDSGERPWRQPLLLAASQRSFRLEDTLLKDSRASLGCSRQSPRDQQDQ 565
GG+ T+ +RP +QP L+ + T++ S + S+Q PR QQ Q
Sbjct: 1028 GGLTTLPQGLTLIQRPGQQPQLVQVQAAPGSTQRTIITQSNTAAAASQQQPRQQQQQ 1084
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 31.5 bits (68), Expect = 0.97
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 369
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 918 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 31.5 bits (68), Expect = 0.97
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 369
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 31.5 bits (68), Expect = 0.97
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 369
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 31.5 bits (68), Expect = 0.97
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 369
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 282 TCCRP-NSACPWWWYS*VRSGC 344
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 282 TCCRP-NSACPWWWYS*VRSGC 344
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 282 TCCRP-NSACPWWWYS*VRSGC 344
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE013599-1641|AAO41395.1| 581|Drosophila melanogaster CG33007-PA
protein.
Length = 581
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 407 TVASTSDSGERPWRQPLLLAASQRSFRLEDTLLKDSRASLGCSRQSPRDQQDQTGCH 577
T+ S+S SGE P + L A S+ R + S +SLG R++ ++Q Q+ CH
Sbjct: 272 TLDSSSSSGEEPVKPSL--ARSECDIRAR--VAASSNSSLGRRRRAGMNRQVQSACH 324
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 70 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 183
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 70 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 183
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p
protein.
Length = 498
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 528 PREARESFNNVSSSLNERWDAASSN-GCRQGRSPLSEVDATVPTPPG 391
P ++R+ F S ++R + N GC +PL + V TPPG
Sbjct: 409 PEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPPG 455
>AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA
protein.
Length = 537
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 528 PREARESFNNVSSSLNERWDAASSN-GCRQGRSPLSEVDATVPTPPG 391
P ++R+ F S ++R + N GC +PL + V TPPG
Sbjct: 448 PEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPPG 494
>AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p
protein.
Length = 493
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 152 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQPVLNHGVLDVLSPEF 301
+F RPD+ D+ ++ SK C+ + GH + +LDV+ +F
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH--ISCEDILDVVFKDF 489
>AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p
protein.
Length = 493
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 152 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQPVLNHGVLDVLSPEF 301
+F RPD+ D+ ++ SK C+ + GH + +LDV+ +F
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH--ISCEDILDVVFKDF 489
>AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-PA
protein.
Length = 493
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 152 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQPVLNHGVLDVLSPEF 301
+F RPD+ D+ ++ SK C+ + GH + +LDV+ +F
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH--ISCEDILDVVFKDF 489
>BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p protein.
Length = 1103
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/58 (27%), Positives = 22/58 (37%)
Frame = -2
Query: 382 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWLVTSLLAHAVGLPRVL 209
G T HH + H + HH H G ++S LA A GL R++
Sbjct: 1004 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1061
>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p protein.
Length = 1413
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/58 (27%), Positives = 22/58 (37%)
Frame = -2
Query: 382 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWLVTSLLAHAVGLPRVL 209
G T HH + H + HH H G ++S LA A GL R++
Sbjct: 1314 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1371
>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
isoform A protein.
Length = 1413
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/58 (27%), Positives = 22/58 (37%)
Frame = -2
Query: 382 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWLVTSLLAHAVGLPRVL 209
G T HH + H + HH H G ++S LA A GL R++
Sbjct: 1314 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1371
>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
isoform B protein.
Length = 1700
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/58 (27%), Positives = 22/58 (37%)
Frame = -2
Query: 382 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWLVTSLLAHAVGLPRVL 209
G T HH + H + HH H G ++S LA A GL R++
Sbjct: 1601 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1658
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,310,156
Number of Sequences: 53049
Number of extensions: 592166
Number of successful extensions: 3608
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3465
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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