Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021709
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   3.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   6.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 182 ISKKYLSIYISRSLIDDLLCLLEFSIINLRNYLF 81
           ++ K + I+++   IDDLL    F    +  YLF
Sbjct: 90  VAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLF 123


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 136 SIRERDIYILRYFLLIKNKIHSIVNFFISR 225
           S+  + I +LR+ LL   K+H + + F  R
Sbjct: 145 SLMVQAIQVLRFHLLELEKVHELCDNFCHR 174


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -1

Query: 182 ISKKYLSIYISRSLIDDLLCLLEFSIINLRNYLF 81
           I+ + + I++    +DDLL +  ++   +  YLF
Sbjct: 90  IAGRLIDIFLGMRNVDDLLSVAVYARDRVNPYLF 123


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 154 IYILRYFLLIKNKIHSI 204
           +YI  Y +LI+NKI ++
Sbjct: 178 LYICSYTVLIRNKISNL 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,296
Number of Sequences: 336
Number of extensions: 3416
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)