Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021709
         (743 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X61180-1|CAA43486.1|  362|Drosophila melanogaster conceptual pro...    30   3.8  
BT004911-1|AAO49164.1|  362|Drosophila melanogaster HL01248p pro...    30   3.8  
AE014298-983|AAF46226.1|  362|Drosophila melanogaster CG3039-PB,...    30   3.8  
AE014298-982|AAF46225.1|  362|Drosophila melanogaster CG3039-PA,...    30   3.8  

>X61180-1|CAA43486.1|  362|Drosophila melanogaster conceptual
           protein of  1(1)ogrelocus protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 134 DLLCLLEFSIINLRNYLF*VLIWFCYLPLFIINTI 30
           D LC+L  +I+N + Y+F +  WF  L + +I  I
Sbjct: 253 DSLCILPLNIVNEKTYVF-IWFWFWILLVLLIGLI 286


>BT004911-1|AAO49164.1|  362|Drosophila melanogaster HL01248p
           protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 134 DLLCLLEFSIINLRNYLF*VLIWFCYLPLFIINTI 30
           D LC+L  +I+N + Y+F +  WF  L + +I  I
Sbjct: 253 DSLCILPLNIVNEKTYVF-IWFWFWILLVLLIGLI 286


>AE014298-983|AAF46226.1|  362|Drosophila melanogaster CG3039-PB,
           isoform B protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 134 DLLCLLEFSIINLRNYLF*VLIWFCYLPLFIINTI 30
           D LC+L  +I+N + Y+F +  WF  L + +I  I
Sbjct: 253 DSLCILPLNIVNEKTYVF-IWFWFWILLVLLIGLI 286


>AE014298-982|AAF46225.1|  362|Drosophila melanogaster CG3039-PA,
           isoform A protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 134 DLLCLLEFSIINLRNYLF*VLIWFCYLPLFIINTI 30
           D LC+L  +I+N + Y+F +  WF  L + +I  I
Sbjct: 253 DSLCILPLNIVNEKTYVF-IWFWFWILLVLLIGLI 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,737,141
Number of Sequences: 53049
Number of extensions: 492993
Number of successful extensions: 720
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)