Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021708
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA prot...    24   4.2  
AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor...    24   4.2  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   9.8  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   9.8  

>AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA
           protein.
          Length = 58

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 520 IKFSRIWIFIYLMILFISKQRE 585
           + FS+I+IF+ L +L +  Q E
Sbjct: 1   MNFSKIFIFVVLAVLLLCSQTE 22


>AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor
           protein.
          Length = 58

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 520 IKFSRIWIFIYLMILFISKQRE 585
           + FS+I+IF+ L +L +  Q E
Sbjct: 1   MNFSKIFIFVVLAVLLLCSQTE 22


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 69  YIH*GEEETFVIGRINFLVLEILKFFICSLVLRV 170
           ++H  + E  V G ++   L +   +I SL LRV
Sbjct: 232 HVHPPQPEISVTGWVSITALTLAVIYIVSLFLRV 265


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 645  LRPMRCDVLVFELTKKRA 698
            +R  R D+LV+E  KKRA
Sbjct: 1098 IRANRPDILVYEKRKKRA 1115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,780
Number of Sequences: 2352
Number of extensions: 11981
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)