Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021707
(594 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 58 2e-08
AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstra... 58 2e-08
AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens ... 58 2e-08
AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens ... 58 2e-08
AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstra... 58 2e-08
BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein pr... 40 0.005
>BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41 protein.
Length = 622
Score = 58.4 bits (135), Expect = 2e-08
Identities = 35/83 (42%), Positives = 43/83 (51%)
Frame = +3
Query: 264 DTKSSSENDHDDETSQEEWGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESV 443
D+ S D DD G + NVSLLDQH EEE ILESV
Sbjct: 65 DSGSEPRGDEDDIPL----GPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV 120
Query: 444 AQSKALMGVAELAKGIQYEEPIR 512
A+ +ALM V E+AKGI Y++PI+
Sbjct: 121 AEGRALMSVKEMAKGITYDDPIK 143
Score = 40.3 bits (90), Expect = 0.005
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 509 KTSWRPPRCILDLPETRHEMIRNKLRIL 592
KTSW PPR +L + E RHE +R K IL
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHIL 170
>AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstrakt
variant protein.
Length = 622
Score = 58.4 bits (135), Expect = 2e-08
Identities = 35/83 (42%), Positives = 43/83 (51%)
Frame = +3
Query: 264 DTKSSSENDHDDETSQEEWGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESV 443
D+ S D DD G + NVSLLDQH EEE ILESV
Sbjct: 65 DSGSEPRGDEDDIPL----GPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV 120
Query: 444 AQSKALMGVAELAKGIQYEEPIR 512
A+ +ALM V E+AKGI Y++PI+
Sbjct: 121 AEGRALMSVKEMAKGITYDDPIK 143
Score = 40.3 bits (90), Expect = 0.005
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 509 KTSWRPPRCILDLPETRHEMIRNKLRIL 592
KTSW PPR +L + E RHE +R K IL
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHIL 170
>AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ14862 fis, clone PLACE1001739, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 58.4 bits (135), Expect = 2e-08
Identities = 35/83 (42%), Positives = 43/83 (51%)
Frame = +3
Query: 264 DTKSSSENDHDDETSQEEWGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESV 443
D+ S D DD G + NVSLLDQH EEE ILESV
Sbjct: 65 DSGSEPRGDEDDIPL----GPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV 120
Query: 444 AQSKALMGVAELAKGIQYEEPIR 512
A+ +ALM V E+AKGI Y++PI+
Sbjct: 121 AEGRALMSVKEMAKGITYDDPIK 143
Score = 40.3 bits (90), Expect = 0.005
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 509 KTSWRPPRCILDLPETRHEMIRNKLRIL 592
KTSW PPR +L + E RHE +R K IL
Sbjct: 143 KTSWTPPRYVLSMSEERHERVREKYHIL 170
>AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ10393 fis, clone NT2RM4000191, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 58.4 bits (135), Expect = 2e-08
Identities = 35/83 (42%), Positives = 43/83 (51%)
Frame = +3
Query: 264 DTKSSSENDHDDETSQEEWGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESV 443
D+ S D DD G + NVSLLDQH EEE ILESV
Sbjct: 65 DSGSEPRGDEDDIPL----GPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV 120
Query: 444 AQSKALMGVAELAKGIQYEEPIR 512
A+ +ALM V E+AKGI Y++PI+
Sbjct: 121 AEGRALMSVKEMAKGITYDDPIK 143
Score = 40.3 bits (90), Expect = 0.005
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 509 KTSWRPPRCILDLPETRHEMIRNKLRIL 592
KTSW PPR +L + E RHE +R K IL
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHIL 170
>AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstrakt
protein.
Length = 621
Score = 58.4 bits (135), Expect = 2e-08
Identities = 35/83 (42%), Positives = 43/83 (51%)
Frame = +3
Query: 264 DTKSSSENDHDDETSQEEWGRRYNVSLLDQHXXXXXXXXXXXXXXXXXXXXEEEHILESV 443
D+ S D DD G + NVSLLDQH EEE ILESV
Sbjct: 64 DSGSEPRGDEDDIPL----GPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV 119
Query: 444 AQSKALMGVAELAKGIQYEEPIR 512
A+ +ALM V E+AKGI Y++PI+
Sbjct: 120 AEGRALMSVKEMAKGITYDDPIK 142
Score = 40.3 bits (90), Expect = 0.005
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 509 KTSWRPPRCILDLPETRHEMIRNKLRIL 592
KTSW PPR +L + E RHE +R K IL
Sbjct: 142 KTSWTPPRYVLSMSEERHERVRKKYHIL 169
>BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein
protein.
Length = 496
Score = 40.3 bits (90), Expect = 0.005
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 509 KTSWRPPRCILDLPETRHEMIRNKLRIL 592
KTSW PPR +L + E RHE +R K IL
Sbjct: 17 KTSWTPPRYVLSMSEERHERVRKKYHIL 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,596,141
Number of Sequences: 237096
Number of extensions: 1673091
Number of successful extensions: 4800
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4757
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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