BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021706 (673 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 108 1e-22 UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 107 2e-22 UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 104 2e-21 UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 90 4e-17 UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 89 7e-17 UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 89 7e-17 UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 88 2e-16 UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 85 1e-15 UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 85 1e-15 UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 85 1e-15 UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 85 2e-15 UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 83 6e-15 UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 82 1e-14 UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 82 1e-14 UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 81 2e-14 UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 74 3e-12 UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 71 3e-11 UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 66 6e-10 UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 64 3e-09 UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 61 2e-08 UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 58 1e-07 UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 58 2e-07 UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 51 2e-05 UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 49 1e-04 UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 48 3e-04 UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 48 3e-04 UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 45 0.001 UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 42 0.010 UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 42 0.010 UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.018 UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 41 0.024 UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 40 0.041 UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 40 0.041 UniRef50_Q2T2X7 Cluster: Transcriptional regulator, GntR family;... 33 0.23 UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 38 0.29 UniRef50_Q9VJJ9 Cluster: CG31738-PB, isoform B; n=3; Drosophila ... 37 0.51 UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 34 2.7 UniRef50_Q6ZS86 Cluster: Glycerol kinase 5; n=26; Euteleostomi|R... 34 3.6 UniRef50_Q2J5X5 Cluster: Putative uncharacterized protein; n=3; ... 33 4.8 UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8 UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3 UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 33 6.3 UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;... 33 8.3 >UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens (Human) Length = 427 Score = 108 bits (260), Expect = 1e-22 Identities = 49/83 (59%), Positives = 54/83 (65%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH Sbjct: 77 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPAL 136 Query: 435 XQARGHIIEKIPELPLVVADKVQ 503 ++GH IE++PELPLVV DKV+ Sbjct: 137 VMSKGHRIEEVPELPLVVEDKVE 159 Score = 99 bits (238), Expect = 5e-20 Identities = 47/70 (67%), Positives = 56/70 (80%) Frame = +1 Query: 25 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 204 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59 Query: 205 HQTSAESWGT 234 HQTSAESWGT Sbjct: 60 HQTSAESWGT 69 Score = 89.0 bits (211), Expect = 9e-17 Identities = 39/54 (72%), Positives = 48/54 (88%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+G II+N+D G Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216 >UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygota|Rep: Ribosomal protein 23 - Lonomia obliqua (Moth) Length = 274 Score = 107 bits (258), Expect = 2e-22 Identities = 49/55 (89%), Positives = 53/55 (96%) Frame = +2 Query: 509 NKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 NKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKG LII+NKDQG Sbjct: 27 NKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQG 81 Score = 36.3 bits (80), Expect = 0.67 Identities = 12/24 (50%), Positives = 21/24 (87%) Frame = +3 Query: 444 RGHIIEKIPELPLVVADKVQEITR 515 RG++++ + E+PLVV+DK+QEI + Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINK 28 >UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila melanogaster (Fruit fly) Length = 401 Score = 104 bits (249), Expect = 2e-21 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH Sbjct: 80 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPAL 139 Query: 435 XQARGHIIEKIPELPLVVADKVQEITR 515 Q++GH+I+ + E PLVV+D+VQ++ + Sbjct: 140 VQSKGHVIDGVSEFPLVVSDEVQKVQK 166 Score = 97.9 bits (233), Expect = 2e-19 Identities = 47/72 (65%), Positives = 56/72 (77%) Frame = +1 Query: 19 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 198 MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60 Query: 199 AGHQTSAESWGT 234 AGHQTSAESWGT Sbjct: 61 AGHQTSAESWGT 72 Score = 89.4 bits (212), Expect = 7e-17 Identities = 42/69 (60%), Positives = 53/69 (76%) Frame = +2 Query: 467 SRASLGCSRQSPRDNKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGA 646 S L S + + KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+G Sbjct: 151 SEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGP 210 Query: 647 LIIFNKDQG 673 L++++KD+G Sbjct: 211 LVVYDKDEG 219 >UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; Phaeosphaeria nodorum|Rep: Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum) Length = 349 Score = 90.2 bits (214), Expect = 4e-17 Identities = 39/79 (49%), Positives = 46/79 (58%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH Sbjct: 53 PRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQKRFATASALAASGSPAL 112 Query: 435 XQARGHIIEKIPELPLVVA 491 ARGH + +PE+PLV++ Sbjct: 113 LMARGHNVSTVPEVPLVIS 131 Score = 55.6 bits (128), Expect = 1e-06 Identities = 26/53 (49%), Positives = 36/53 (67%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQ 670 KT AV L+ + A +D K S++LRAGKGK+R RR QR+G L+I+N D+ Sbjct: 142 KTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDE 194 Score = 33.5 bits (73), Expect = 4.8 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +1 Query: 163 KNSRQPYCVSKEAGHQTSAESWGT 234 ++++ V +AGHQTSAESWGT Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGT 45 >UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, putative; n=2; Theileria|Rep: 60S ribosomal subunit protein L4/L1, putative - Theileria annulata Length = 426 Score = 89.4 bits (212), Expect = 7e-17 Identities = 38/87 (43%), Positives = 49/87 (56%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH Sbjct: 76 PRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPL 135 Query: 435 XQARGHIIEKIPELPLVVADKVQEITR 515 +RGH +E +PELPLV+ D ++ +T+ Sbjct: 136 VMSRGHRVESVPELPLVLDDTMETLTK 162 Score = 75.4 bits (177), Expect = 1e-12 Identities = 36/68 (52%), Positives = 48/68 (70%) Frame = +1 Query: 31 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 210 V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60 Query: 211 TSAESWGT 234 TSA SWGT Sbjct: 61 TSARSWGT 68 >UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Sclerotiniaceae|Rep: 60S ribosomal protein L4 - Sclerotinia sclerotiorum 1980 Length = 373 Score = 89.4 bits (212), Expect = 7e-17 Identities = 43/96 (44%), Positives = 54/96 (56%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH Sbjct: 76 PRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPAL 135 Query: 435 XQARGHIIEKIPELPLVVADKVQEITRPNRLSSS*G 542 ARGH I ++ E+PLV+ +V E + R +++ G Sbjct: 136 LFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAG 171 Score = 88.6 bits (210), Expect = 1e-16 Identities = 42/67 (62%), Positives = 48/67 (71%) Frame = +1 Query: 34 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 213 +RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61 Query: 214 SAESWGT 234 SAESWGT Sbjct: 62 SAESWGT 68 Score = 48.4 bits (110), Expect = 2e-04 Identities = 22/50 (44%), Positives = 34/50 (68%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFN 661 +T A L+ + A D+ KV S++LRAGKGK+R RR QR+G L++++ Sbjct: 165 RTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYD 214 >UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; Leishmania major strain Friedlin|Rep: Ribosomal protein L1a, putative - Leishmania major strain Friedlin Length = 432 Score = 88.2 bits (209), Expect = 2e-16 Identities = 41/83 (49%), Positives = 47/83 (56%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH Sbjct: 76 PRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSL 135 Query: 435 XQARGHIIEKIPELPLVVADKVQ 503 +RGH I +PE+PLVV D +Q Sbjct: 136 VMSRGHQIGNVPEVPLVVEDSIQ 158 Score = 78.2 bits (184), Expect = 2e-13 Identities = 39/67 (58%), Positives = 47/67 (70%) Frame = +1 Query: 34 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 213 ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61 Query: 214 SAESWGT 234 SA SWGT Sbjct: 62 SAHSWGT 68 Score = 56.0 bits (129), Expect = 8e-07 Identities = 23/54 (42%), Positives = 39/54 (72%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR + R+G +++ ++G Sbjct: 162 KTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKG 215 >UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Oligohymenophorea|Rep: Ribosomal protein L4, putative - Paramecium tetraurelia Length = 406 Score = 85.4 bits (202), Expect = 1e-15 Identities = 39/83 (46%), Positives = 45/83 (54%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV G GTHRSGQ AFGN CR GRM P K WRRWH Sbjct: 78 PRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPL 137 Query: 435 XQARGHIIEKIPELPLVVADKVQ 503 ARGH I ++P++PLVV DK++ Sbjct: 138 VLARGHRISQVPQIPLVVEDKIE 160 Score = 72.9 bits (171), Expect = 6e-12 Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Frame = +1 Query: 40 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 216 PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64 Query: 217 AESWGT 234 AESWGT Sbjct: 65 AESWGT 70 Score = 41.5 bits (93), Expect = 0.018 Identities = 19/49 (38%), Positives = 31/49 (63%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIF 658 KT A+ FL+R A+ D+ KV ++ +RAG K R ++ RKG L+++ Sbjct: 164 KTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVY 212 >UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ribosomal protein L4 - Canis familiaris Length = 248 Score = 85.0 bits (201), Expect = 1e-15 Identities = 37/54 (68%), Positives = 47/54 (87%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G+ II+N+D G Sbjct: 104 KTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157 Score = 54.4 bits (125), Expect = 2e-06 Identities = 23/35 (65%), Positives = 28/35 (80%) Frame = +1 Query: 130 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 234 D+VN VH ++ KN QPY VS+ AG+QTSAESWGT Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGT 59 >UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4; Cryptosporidium|Rep: 60S ribosomal protein-like, putative - Cryptosporidium parvum Iowa II Length = 394 Score = 85.0 bits (201), Expect = 1e-15 Identities = 39/87 (44%), Positives = 49/87 (56%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV GT RSGQGAFGNMCRGG MF+P K +RR+H Sbjct: 78 PRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSL 137 Query: 435 XQARGHIIEKIPELPLVVADKVQEITR 515 ARGH I +PELPLV+++++Q I + Sbjct: 138 VMARGHRINNVPELPLVISNEIQNINK 164 Score = 79.0 bits (186), Expect = 1e-13 Identities = 38/70 (54%), Positives = 48/70 (68%) Frame = +1 Query: 25 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 204 ++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60 Query: 205 HQTSAESWGT 234 HQ SAESWGT Sbjct: 61 HQHSAESWGT 70 Score = 45.2 bits (102), Expect = 0.001 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = +2 Query: 509 NKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 NKT AV F + K + +K + S +R GKGKMRNRRR+ G L+++ +D G Sbjct: 163 NKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNG 219 >UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia bovis|Rep: Ribosomal protein RPL4A - Babesia bovis Length = 360 Score = 84.6 bits (200), Expect = 2e-15 Identities = 36/87 (41%), Positives = 49/87 (56%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH Sbjct: 76 PRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPV 135 Query: 435 XQARGHIIEKIPELPLVVADKVQEITR 515 +RGH IE + E+P+VV D +++I + Sbjct: 136 VMSRGHRIEALREVPMVVDDAIEQINK 162 Score = 70.5 bits (165), Expect = 3e-11 Identities = 37/66 (56%), Positives = 44/66 (66%) Frame = +1 Query: 37 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 216 RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62 Query: 217 AESWGT 234 A SWGT Sbjct: 63 ARSWGT 68 >UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia malayi (Filarial nematode worm) Length = 306 Score = 83.0 bits (196), Expect = 6e-15 Identities = 34/36 (94%), Positives = 35/36 (97%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 362 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH Sbjct: 194 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229 Score = 81.0 bits (191), Expect = 2e-14 Identities = 38/61 (62%), Positives = 46/61 (75%) Frame = +1 Query: 52 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 231 VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185 Query: 232 T 234 T Sbjct: 186 T 186 >UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, putative; n=5; Plasmodium|Rep: 60S ribosomal subunit protein L4/L1, putative - Plasmodium chabaudi Length = 411 Score = 81.8 bits (193), Expect = 1e-14 Identities = 38/87 (43%), Positives = 47/87 (54%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW Sbjct: 77 PRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSL 136 Query: 435 XQARGHIIEKIPELPLVVADKVQEITR 515 ARGH I + E+PLV ++ ++ + + Sbjct: 137 VLARGHRISNLKEVPLVASNDIESMQK 163 Score = 69.7 bits (163), Expect = 6e-11 Identities = 33/70 (47%), Positives = 45/70 (64%) Frame = +1 Query: 25 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 204 ++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59 Query: 205 HQTSAESWGT 234 ++TSAESWGT Sbjct: 60 YETSAESWGT 69 Score = 45.2 bits (102), Expect = 0.001 Identities = 24/54 (44%), Positives = 33/54 (61%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 KTK A+ FL L ++ ++ KS +LRA GKMRNR+ G LII++ D G Sbjct: 163 KTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSG 216 >UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 - Streblomastix strix Length = 492 Score = 81.8 bits (193), Expect = 1e-14 Identities = 37/87 (42%), Positives = 47/87 (54%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PR+ G GT R+GQ AF N RGG M++P K WRRWH Sbjct: 77 PRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSL 136 Query: 435 XQARGHIIEKIPELPLVVADKVQEITR 515 ARGH I+ +PELPLVV+D V++I + Sbjct: 137 VLARGHKIDNVPELPLVVSDDVEQIKK 163 Score = 57.6 bits (133), Expect = 3e-07 Identities = 29/64 (45%), Positives = 41/64 (64%) Frame = +1 Query: 43 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 222 L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65 Query: 223 SWGT 234 SWGT Sbjct: 66 SWGT 69 Score = 54.8 bits (126), Expect = 2e-06 Identities = 26/54 (48%), Positives = 37/54 (68%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 KTK+AV L LKA D+ +S+R+R G GK RNRR QR+G LI+ ++++G Sbjct: 163 KTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQNEG 216 >UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomonadaceae|Rep: 60s ribosomal protein L1 - Guillardia theta (Cryptomonas phi) Length = 255 Score = 81.4 bits (192), Expect = 2e-14 Identities = 36/91 (39%), Positives = 48/91 (52%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV G GTHRSGQGA N CRGGR+F PT WR+WH Sbjct: 72 PRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSI 131 Query: 435 XQARGHIIEKIPELPLVVADKVQEITRPNRL 527 +RG+ ++ IPE+P V+ D +++I + L Sbjct: 132 IVSRGYRVKTIPEIPFVIEDSIEKIPKTRDL 162 Score = 52.4 bits (120), Expect = 1e-05 Identities = 26/46 (56%), Positives = 30/46 (65%) Frame = +1 Query: 97 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 234 +P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGT Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGT 64 Score = 34.3 bits (75), Expect = 2.7 Identities = 18/52 (34%), Positives = 31/52 (59%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKD 667 KT+ + L L + I++ ++L++GKGKMRNRR + G L++F + Sbjct: 158 KTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVFKNN 208 >UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein, putative - Trichomonas vaginalis G3 Length = 370 Score = 74.1 bits (174), Expect = 3e-12 Identities = 35/87 (40%), Positives = 45/87 (51%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV G G++R+GQGA+ N CRGG F P RRW Sbjct: 74 PRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPL 133 Query: 435 XQARGHIIEKIPELPLVVADKVQEITR 515 QARGH++ ++ E+P+VV D VQEI R Sbjct: 134 VQARGHVLGEVKEVPIVVVDAVQEIKR 160 Score = 52.8 bits (121), Expect = 7e-06 Identities = 25/68 (36%), Positives = 45/68 (66%) Frame = +1 Query: 31 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 210 ++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG + Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58 Query: 211 TSAESWGT 234 SA SWGT Sbjct: 59 VSAISWGT 66 Score = 41.5 bits (93), Expect = 0.018 Identities = 18/54 (33%), Positives = 32/54 (59%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 +T+ AV L+++ + D+ +V R+ KGK R +KG L+I+N+D+G Sbjct: 160 RTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKG 213 >UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 - Encephalitozoon cuniculi Length = 335 Score = 70.9 bits (166), Expect = 3e-11 Identities = 34/82 (41%), Positives = 42/82 (51%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PRV+GGGT R+GQGAF N CR GRM PTK RRW Sbjct: 74 PRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASL 133 Query: 435 XQARGHIIEKIPELPLVVADKV 500 +ARGH I + LP++V+D + Sbjct: 134 VEARGHRISDVKMLPIIVSDDI 155 Score = 55.2 bits (127), Expect = 1e-06 Identities = 30/63 (47%), Positives = 35/63 (55%) Frame = +1 Query: 46 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 225 ++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63 Query: 226 WGT 234 WGT Sbjct: 64 WGT 66 Score = 54.8 bits (126), Expect = 2e-06 Identities = 27/48 (56%), Positives = 33/48 (68%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALII 655 KTK AV LR L ++ +V KS+ +R GKGKMRNRR QRKG LI+ Sbjct: 160 KTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILIV 207 >UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal protein L4 - Entamoeba histolytica HM-1:IMSS Length = 431 Score = 66.5 bits (155), Expect = 6e-10 Identities = 32/81 (39%), Positives = 41/81 (50%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PR+ G G+ R+GQGAFGNM R G MF+P K +R+W Sbjct: 77 PRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPAL 136 Query: 435 XQARGHIIEKIPELPLVVADK 497 ARGH I +P++PLVV K Sbjct: 137 VSARGHHIAGVPQIPLVVNSK 157 Score = 62.9 bits (146), Expect = 7e-09 Identities = 27/52 (51%), Positives = 40/52 (76%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKD 667 KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+ +RKG L+++ D Sbjct: 164 KTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGND 215 Score = 61.7 bits (143), Expect = 2e-08 Identities = 32/67 (47%), Positives = 43/67 (64%) Frame = +1 Query: 34 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 213 +RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62 Query: 214 SAESWGT 234 SA SWGT Sbjct: 63 SAISWGT 69 >UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1; Ostreococcus tauri|Rep: Ribosomal protein RPL1/RPL2/RL4L4 - Ostreococcus tauri Length = 404 Score = 64.1 bits (149), Expect = 3e-09 Identities = 28/54 (51%), Positives = 43/54 (79%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 KT +AV L++L A++DI KV S+ +R+GKGKMRNRR +QR+G L+++++D G Sbjct: 166 KTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNG 219 Score = 37.5 bits (83), Expect = 0.29 Identities = 18/56 (32%), Positives = 22/56 (39%) Frame = +3 Query: 348 WRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEITR 515 WRRWH ARGH +E +PE+PLVV D I + Sbjct: 111 WRRWHRRVNIKEKRYAVCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKK 166 Score = 35.9 bits (79), Expect = 0.89 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +1 Query: 82 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 168 GA+ +P VF +PIR D+VN VH ++KN Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43 >UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ribosomal protein L4 - Canis familiaris Length = 253 Score = 61.3 bits (142), Expect = 2e-08 Identities = 26/36 (72%), Positives = 33/36 (91%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 619 KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN Sbjct: 26 KTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61 Score = 32.7 bits (71), Expect = 8.3 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = +3 Query: 441 ARGHIIEKIPELPLVVADKVQ 503 ++GH I ++PELPLVV DKV+ Sbjct: 2 SKGHRIGEVPELPLVVEDKVE 22 >UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia ATCC 50803 Length = 316 Score = 58.4 bits (135), Expect = 1e-07 Identities = 29/64 (45%), Positives = 36/64 (56%) Frame = +1 Query: 40 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 219 P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60 Query: 220 ESWG 231 SWG Sbjct: 61 HSWG 64 Score = 52.4 bits (120), Expect = 1e-05 Identities = 23/52 (44%), Positives = 35/52 (67%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKD 667 KTK A+ ++ + D+ + S+ +RAG+GKMRNRR I RKG L+I+N + Sbjct: 151 KTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYNTE 202 Score = 41.9 bits (94), Expect = 0.014 Identities = 23/67 (34%), Positives = 27/67 (40%) Frame = +3 Query: 288 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 467 G GA+ N RGG M PT RRW +ARGH I + Sbjct: 78 GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALVEARGHRIADV 137 Query: 468 PELPLVV 488 P +PLVV Sbjct: 138 PSIPLVV 144 >UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella natans|Rep: Ribosomal protein L4A - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 278 Score = 58.0 bits (134), Expect = 2e-07 Identities = 25/91 (27%), Positives = 43/91 (47%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 434 PR++G GT ++GQGA NMCRGGR+F ++W+ Sbjct: 78 PRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNRKVKVSAFKTALLSTLFETL 137 Query: 435 XQARGHIIEKIPELPLVVADKVQEITRPNRL 527 +RGH ++ + P+++ ++ I P+ L Sbjct: 138 VVSRGHSLKDVKNFPMIIDSILKYIWHPSEL 168 >UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryarchaeota|Rep: 50S ribosomal protein L4P - Methanopyrus kandleri Length = 260 Score = 51.2 bits (117), Expect = 2e-05 Identities = 20/55 (36%), Positives = 36/55 (65%) Frame = +2 Query: 509 NKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 NK ++ F + + W+D+ + ++R+RAGKGK R RR ++ K LI+ ++D+G Sbjct: 156 NKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEG 210 Score = 50.4 bits (115), Expect = 4e-05 Identities = 25/64 (39%), Positives = 37/64 (57%) Frame = +1 Query: 40 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 219 P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58 Query: 220 ESWG 231 ESWG Sbjct: 59 ESWG 62 Score = 36.3 bits (80), Expect = 0.67 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXX 431 PRV+G +G+ A GG + APT P + W Sbjct: 71 PRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPE 129 Query: 432 XXQARGHIIEKIPELPLVVADKVQEITR 515 + RGH+I+ +P LP+VV D+++ + + Sbjct: 130 FVKERGHVIDDVPHLPVVVVDELKSLNK 157 >UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_974, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 386 Score = 48.8 bits (111), Expect = 1e-04 Identities = 23/52 (44%), Positives = 31/52 (59%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKD 667 KT A+ L++ A+ D K S + GKGKMRNRR I RKG LI++ + Sbjct: 26 KTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKGPLIVYGME 77 Score = 35.5 bits (78), Expect = 1.2 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +3 Query: 441 ARGHIIEKIPELPLVVADKVQEITR 515 ARGH IE +PELPLV+ D + + + Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEK 26 >UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermoplasmatales|Rep: 50S ribosomal protein L4P - Thermoplasma acidophilum Length = 255 Score = 47.6 bits (108), Expect = 3e-04 Identities = 22/49 (44%), Positives = 31/49 (63%) Frame = +2 Query: 509 NKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALII 655 NKTK A+ L+ L + DI + + + +RAG+GKMR RR Q K LI+ Sbjct: 153 NKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVLIV 201 >UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarchaeota|Rep: 50S ribosomal protein L4P - Archaeoglobus fulgidus Length = 252 Score = 47.6 bits (108), Expect = 3e-04 Identities = 19/54 (35%), Positives = 33/54 (61%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 +TK R + ++D+ + + +R RAG+GKMR RR +++K L++ KD G Sbjct: 150 RTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDG 203 Score = 35.9 bits (79), Expect = 0.89 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = +1 Query: 97 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 231 LP VF RPD++ +++ + RQPY + +G S E+WG Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWG 62 >UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum Length = 252 Score = 45.2 bits (102), Expect = 0.001 Identities = 20/49 (40%), Positives = 32/49 (65%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIF 658 KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKG L+++ Sbjct: 10 KTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVY 58 >UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum aerophilum Length = 283 Score = 42.3 bits (95), Expect = 0.010 Identities = 29/108 (26%), Positives = 40/108 (37%) Frame = +3 Query: 192 QGGWSPNQC*IMGYWTCCRPNPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 371 +G + C G PR +G R G F RGGR P K ++ H Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132 Query: 372 XXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEITR 515 ARGH++EK+P LP+VV ++I R Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINR 180 Score = 41.9 bits (94), Expect = 0.014 Identities = 18/49 (36%), Positives = 28/49 (57%) Frame = +2 Query: 509 NKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALII 655 N+ K+A L W D+ + + ++RAGKGKMR RR + K L++ Sbjct: 179 NRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVV 227 Score = 34.7 bits (76), Expect = 2.1 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = +1 Query: 100 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 231 P F PIRPDL+ ++S QP V + AG + S ES+G Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFG 88 >UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P - Nanoarchaeum equitans Length = 268 Score = 42.3 bits (95), Expect = 0.010 Identities = 23/50 (46%), Positives = 32/50 (64%) Frame = +2 Query: 512 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFN 661 KTK+ L +L ++ +VY+ +R RAGKGK R R I+RKG LI+ N Sbjct: 164 KTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVN 212 >UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; Leishmania|Rep: Putative uncharacterized protein - Leishmania major strain Friedlin Length = 534 Score = 41.5 bits (93), Expect = 0.018 Identities = 18/35 (51%), Positives = 20/35 (57%) Frame = +2 Query: 272 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 376 W VR C+R HV WW +VR E L LAP QP Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168 >UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum symbiosum Length = 271 Score = 41.1 bits (92), Expect = 0.024 Identities = 24/90 (26%), Positives = 39/90 (43%) Frame = +3 Query: 258 RVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXX 437 R++GGG R G+ RGGR P K + H Sbjct: 74 RMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKSTV 133 Query: 438 QARGHIIEKIPELPLVVADKVQEITRPNRL 527 RGHII+ I ELP+V++D ++ +++ + + Sbjct: 134 AGRGHIIDGI-ELPIVISDDIESVSKASEV 162 >UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus solfataricus Length = 267 Score = 40.3 bits (90), Expect = 0.041 Identities = 19/45 (42%), Positives = 27/45 (60%) Frame = +1 Query: 97 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 231 LP +F P+R DL+ V ++ +S QP AG +TSAES+G Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFG 69 Score = 39.9 bits (89), Expect = 0.055 Identities = 19/47 (40%), Positives = 30/47 (63%) Frame = +2 Query: 515 TKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALII 655 T + FL+++ + D+ +V + R+RAGKGKMR R+ + G LII Sbjct: 160 TSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPLII 206 >UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarchaeota|Rep: 50S ribosomal protein L4P - Methanosphaera stadtmanae (strain DSM 3091) Length = 259 Score = 40.3 bits (90), Expect = 0.041 Identities = 17/53 (32%), Positives = 31/53 (58%) Frame = +2 Query: 515 TKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALIIFNKDQG 673 TK+ + L DI++ K +++++GKGK+R R+ KG L++ D+G Sbjct: 154 TKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRG 206 Score = 39.9 bits (89), Expect = 0.055 Identities = 21/63 (33%), Positives = 35/63 (55%) Frame = +1 Query: 46 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 225 ++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61 Query: 226 WGT 234 +G+ Sbjct: 62 FGS 64 >UniRef50_Q2T2X7 Cluster: Transcriptional regulator, GntR family; n=11; pseudomallei group|Rep: Transcriptional regulator, GntR family - Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /CIP 106301) Length = 439 Score = 32.7 bits (71), Expect(2) = 0.23 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Frame = +2 Query: 482 GCSRQSPRDNKT-KQAVIFLR-RLKAWSDILKVYKSQRLRAGKGKMRNRRRI 631 GC RQ P D T + +F R RL S + +V+ + R+R+ + +R++RRI Sbjct: 125 GCLRQWPCDRNTLRSRFLFPRQRLSRPSPLSRVFVASRMRSRRRALRSQRRI 176 Score = 24.2 bits (50), Expect(2) = 0.23 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +2 Query: 353 ALAPSRQPPTAESGLGGSRCCYRRPSARSG*RTHY*KDSRASLGCSRQSPR 505 A AP+ + P A + G RRP AR R+ RAS R SPR Sbjct: 55 ARAPAARRPGAAACASGPMARLRRPHARPARRSPL---PRASRFRGRHSPR 102 >UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula marismortui|Rep: 50S ribosomal protein L4P - Haloarcula marismortui (Halobacterium marismortui) Length = 246 Score = 37.5 bits (83), Expect = 0.29 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 97 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 234 LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+ Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGS 63 >UniRef50_Q9VJJ9 Cluster: CG31738-PB, isoform B; n=3; Drosophila melanogaster|Rep: CG31738-PB, isoform B - Drosophila melanogaster (Fruit fly) Length = 1700 Score = 36.7 bits (81), Expect = 0.51 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = -2 Query: 336 GRTYVHHDTCYRRHPDRTYEYHHHGHADSGDSTSSTP*FSTGLVTSLLAHAVGLPRVL 163 G T HH + H + HH H G S+S++ + ++S LA A GL R++ Sbjct: 1601 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1658 >UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum pernix Length = 272 Score = 34.3 bits (75), Expect = 2.7 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +2 Query: 518 KQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGALII 655 ++A L + + D+L+ + +R AGKGKMR RR K L + Sbjct: 167 REARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFV 212 Score = 32.7 bits (71), Expect = 8.3 Identities = 21/63 (33%), Positives = 29/63 (46%) Frame = +1 Query: 43 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 222 +V VY E+ LP +F+ P+R DL+ +S QP AG +TSA Sbjct: 15 IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72 Query: 223 SWG 231 S G Sbjct: 73 SLG 75 >UniRef50_Q6ZS86 Cluster: Glycerol kinase 5; n=26; Euteleostomi|Rep: Glycerol kinase 5 - Homo sapiens (Human) Length = 529 Score = 33.9 bits (74), Expect = 3.6 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%) Frame = -1 Query: 622 TVAHFTLTSTKT-LRLVH-LKDIRPCLEAPQEDDSLFGLVISWTLSATTKGS 473 T + FT T+ +T LRLV L+++ +A +E++ FG + +W L TKGS Sbjct: 157 TASLFTFTTQQTSLRLVWILQNLTEVQKAVEEENCCFGTIDTWLLYKLTKGS 208 >UniRef50_Q2J5X5 Cluster: Putative uncharacterized protein; n=3; Frankia|Rep: Putative uncharacterized protein - Frankia sp. (strain CcI3) Length = 216 Score = 33.5 bits (73), Expect = 4.8 Identities = 19/45 (42%), Positives = 23/45 (51%) Frame = +3 Query: 222 IMGYWTCCRPNPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 356 + G W CR GGT +G+G GNM G PT+PWRR Sbjct: 7 VNGGWFGCRRGTEKLYGGTC-AGRGG-GNMTAGPLGRVPTRPWRR 49 >UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1; Pseudomonas putida W619|Rep: Putative uncharacterized protein - Pseudomonas putida W619 Length = 852 Score = 33.5 bits (73), Expect = 4.8 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +1 Query: 346 PGGVGTVASTSDSGERPWRQPLLLPASQRSFRLEDTLLKRFPSFP 480 P V +V SD G WRQ L + + FRL LK P+ P Sbjct: 321 PAFVSSVVKVSDRGPYTWRQALAISDAALKFRLNIGKLKASPALP 365 >UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; Bacteroides capillosus ATCC 29799|Rep: Putative uncharacterized protein - Bacteroides capillosus ATCC 29799 Length = 448 Score = 33.1 bits (72), Expect = 6.3 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -2 Query: 318 HDTCYRRHPDRTYEYHHHGHADSGDSTS 235 HD C+ H + + +HHH HA G S Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPGHIAS 136 >UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F01.18; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein P0431F01.18 - Oryza sativa subsp. japonica (Rice) Length = 320 Score = 33.1 bits (72), Expect = 6.3 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +3 Query: 255 PRVRGGGTHRSGQGAFGNMCRGG 323 PR GGG HR GA G + RGG Sbjct: 204 PRAAGGGKHRGAHGANGGVARGG 226 >UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein; n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical protein - Monodelphis domestica Length = 293 Score = 32.7 bits (71), Expect = 8.3 Identities = 18/37 (48%), Positives = 19/37 (51%) Frame = +2 Query: 332 RPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG 442 RP A AA P RQ P E GGS Y P+ RSG Sbjct: 122 RPGPAQAARPPPRQWPCTECPGGGSGVVYHLPTERSG 158 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 651,211,671 Number of Sequences: 1657284 Number of extensions: 13649493 Number of successful extensions: 44934 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 41666 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 44634 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 51652897375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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