Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021705
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.51 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   6.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 661 EGHPEHEGILGHPDFGRSVVQEQSDET 581
           +G P+ + +LG P FGRS   + ++ET
Sbjct: 406 KGFPKSKIVLGVPFFGRSFTLQFTNET 432


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 682 ETDYQHYEGHPEHEGILGHPDFGRS-VVQEQSD 587
           +  Y    G P  + +LG P FGR+  + ++SD
Sbjct: 279 QVKYWMSNGAPSAKIVLGLPTFGRAWAMDDESD 311


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 172 VKIPLTISRCSNFYTMNFTIDSLDKHNL 89
           VKIPL I   SN     +    LDK N+
Sbjct: 447 VKIPLVIIWSSNLSKRPYIYKYLDKKNV 474


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 709 ETQSSDELHIPGHLHGSASFLLGI 780
           E QS +  H P HLHG A  ++GI
Sbjct: 587 EVQSPNLSH-PFHLHGYAFNVVGI 609


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/56 (23%), Positives = 22/56 (39%)
 Frame = -1

Query: 750 KMARNMKFVGALRLTSGQHAIAMRQTISTMKATQNMKGFWATQTLVGRWYRNRAMK 583
           KM +      +L+L          Q ++  +  +       TQT V  W++NR  K
Sbjct: 120 KMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 175


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = -3

Query: 694 RHRDETDYQ-HY---EGHPEHEGILGHPDFGRS 608
           ++ +  DYQ  Y   +G P ++ ILG P +GR+
Sbjct: 263 KYDENVDYQVRYWLQKGAPNNKLILGIPAYGRA 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,903
Number of Sequences: 336
Number of extensions: 4238
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)