Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021705
(780 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1105 + 30438140-30438350,30438448-30438926 54 2e-07
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450... 50 3e-06
03_06_0292 - 32886148-32886354,32886997-32887154,32887265-328873... 48 1e-05
11_06_0192 + 21128298-21128829,21129341-21129407,21131169-211312... 38 0.007
07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155 38 0.007
07_01_0554 - 4121692-4121895,4121991-4122148,4123241-4123354,412... 38 0.009
03_06_0293 - 32889813-32890019,32890144-32890301,32891310-328914... 38 0.012
01_07_0095 + 41053562-41053603,41054609-41054846,41055064-410553... 32 0.44
03_03_0118 + 14597863-14597929,14598844-14599806,14599909-145999... 31 0.78
07_01_0090 - 690870-691613 31 1.4
09_03_0089 + 12265916-12267232 30 1.8
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 30 2.4
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 30 2.4
02_03_0185 - 16134426-16134881 30 2.4
08_02_0041 + 11531010-11531366,11531409-11531657 29 3.1
04_04_0213 - 23672541-23672558,23672706-23672855,23672932-236730... 29 3.1
04_01_0031 + 381389-381841 29 3.1
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 29 5.5
12_02_0065 - 13109652-13110746,13110843-13111762,13139462-131395... 28 7.2
10_08_0611 - 19213994-19214053,19214776-19215732 28 7.2
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 28 9.6
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 28 9.6
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 28 9.6
03_04_0105 - 17322276-17322399,17322516-17322740,17323388-173235... 28 9.6
03_01_0510 + 3841630-3844089,3844235-3844358,3844641-3844786,384... 28 9.6
>03_05_1105 + 30438140-30438350,30438448-30438926
Length = 229
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/81 (32%), Positives = 47/81 (58%)
Frame = +2
Query: 518 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 697
+R AF+RKVYAIL Q+++T+ ++ ++ RP ++ P F + ++I+ I +
Sbjct: 15 LRWAFVRKVYAILSIQMLLTIAVASVVVFVRPVALFFVSTPAGFALYIFLIILPFIVLCP 74
Query: 698 CPDVRRKAPTNFIFLAIFTAA 760
++ P N + LA+FTAA
Sbjct: 75 LYYYYQRHPVNLLLLALFTAA 95
>05_04_0254 -
19444409-19444621,19444724-19444887,19444974-19445087,
19446086-19446395
Length = 266
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +2
Query: 509 EKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIA 688
E ++R F+RKVY IL QL++T AL + H ++ +P + A ++ ++ +
Sbjct: 48 ESALRWGFVRKVYGILAAQLLLTTAVSALTVLHPTLNATLSSSPTL---ALVLAVLPFVL 104
Query: 689 MACCPDVRRKAPTNFIFLAIFT 754
M + K P NF++L +FT
Sbjct: 105 MVPLYHYQHKHPHNFVYLGLFT 126
>03_06_0292 -
32886148-32886354,32886997-32887154,32887265-32887378,
32887660-32887924
Length = 247
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 497 FRFHEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIV 676
+ +R AFIRKVY I+ QL+VT+ P K + VA++++I+
Sbjct: 25 YMIENAQLRWAFIRKVYVIVSVQLLVTVAVAGAVNLVEPIKTFFQARTPEVLVAYVIIII 84
Query: 677 C-LIAMACCPDVRRKAPTNFIFLAIFT 754
LI M R K P N FL +FT
Sbjct: 85 SPLIMMLPMIYFRNKHPINLFFLLLFT 111
>11_06_0192 +
21128298-21128829,21129341-21129407,21131169-21131211,
21131301-21131367,21131613-21131770,21131863-21132057
Length = 353
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 518 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 697
+R AF+RKVY IL Q VT + RP + A W+ ++ +++C C
Sbjct: 79 LRWAFVRKVYCILALQFAVTAAIAVVAWAVRPIPRFFAAGSLASWLVYLAILLCPFIGLC 138
>07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155
Length = 220
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 497 FRFHEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPT--KVWVAQNPFMFWVAFIVL 670
+ +R AFIRKVYAI+ QL+VT+ IA +Y P + ++A+ P +V+
Sbjct: 35 YMIERPELRWAFIRKVYAIVATQLVVTVA-IAAAVYSVPAIRRFFLARTPASLAAFVLVI 93
Query: 671 IVCLIA 688
+ LIA
Sbjct: 94 VAPLIA 99
>07_01_0554 -
4121692-4121895,4121991-4122148,4123241-4123354,
4123824-4124082
Length = 244
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +2
Query: 518 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 697
+R A IRK+Y IL QL++T A+ + R + + + ++I+ I +
Sbjct: 31 MRWALIRKIYVILSMQLLLTAAVAAVVVKVRAISHFFVSSHAGLGLYIFLIILPFIVLCP 90
Query: 698 CPDVRRKAPTNFIFLAIFTAA 760
+K P N I L +FT A
Sbjct: 91 LYYYHQKHPVNLILLGLFTVA 111
>03_06_0293 -
32889813-32890019,32890144-32890301,32891310-32891423,
32891531-32891777
Length = 241
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +2
Query: 518 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 697
+R A I K+Y IL QL +T A + R + + F + +L + LI +
Sbjct: 27 LRWALIHKIYVILSVQLAMTAAVAAFVVKVRGVSEFFVSSNAGFALYIFLLFLPLIVLCP 86
Query: 698 CPDVRRKAPTNFIFLAIFTAA 760
+K P N + L +FT A
Sbjct: 87 LRYYHQKHPVNLLLLGLFTVA 107
>01_07_0095 +
41053562-41053603,41054609-41054846,41055064-41055312,
41055419-41055469,41056044-41056256,41056305-41056367,
41056422-41056474,41056953-41057067,41057150-41057404,
41057531-41058618
Length = 788
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 503 FHEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 682
F S+R AFI +Y L+ Q M F++ + PT + + +FW F+V +
Sbjct: 297 FTSASVRLAFITIIYPCLILQYMGQAAFLSKNILDMPTGFYDSIPGPIFWPVFVVATLAA 356
Query: 683 I 685
+
Sbjct: 357 V 357
>03_03_0118 +
14597863-14597929,14598844-14599806,14599909-14599936,
14600288-14600666
Length = 478
Score = 31.5 bits (68), Expect = 0.78
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 255 GRGVPARWTVPARWTIPTGWRLPARWSLPSRRSVSPGWSIPAGGYAPPQPGF 410
G P + PA T P G P +S P+ G + PAGG+ PP GF
Sbjct: 365 GASPPTTLSPPAGLTPPVGTSPPTDFSPPAA-----GTTPPAGGFTPPAGGF 411
>07_01_0090 - 690870-691613
Length = 247
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +3
Query: 228 IRIKADRTLGRGVPARWTVPARWTIPTGWRLPARWSLPSRRSVSPG--WSIPA---GGYA 392
+R+ A R + V AR V RW T WR R + +V+ G W+ P+ G A
Sbjct: 46 VRVGASRVVAT-VTARPAVARRWVFSTRWRHGRRLRSGAGLTVAMGVQWTPPSRALAGGA 104
Query: 393 PPQPG 407
P+PG
Sbjct: 105 EPRPG 109
>09_03_0089 + 12265916-12267232
Length = 438
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +1
Query: 571 GDDGFHRSVPVPPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQSSDEL 732
G H + P P + LGG SL GGL S+D+L H + DEL
Sbjct: 330 GGARLHDASPSPSFSEFLGGGISLTDGGGLMSSDALHHHLPTRNDAHHHGGDEL 383
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 613 DQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQS 720
D++LGG LH L S + L+H V+ RE++S
Sbjct: 434 DKTLGGQNVLHSLSNARSLELLAHSGEVVLSRESRS 469
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 523 QGFHPKGVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKSLHVLGG 657
QG H G P+ G G H PP Q GG S H GG
Sbjct: 150 QGSHHPGGGPPEYQGRGGPGSHHPGGGPPDYQGRGGSGSHHPGGG 194
>02_03_0185 - 16134426-16134881
Length = 151
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 335 LTLQEERIPRVEHTRRRICAPSA--WLPTCIWRRR 433
+T R + E RRR C+ A WLP WRRR
Sbjct: 3 MTTARHRSSQAEERRRRRCSERARRWLPPRRWRRR 37
>08_02_0041 + 11531010-11531366,11531409-11531657
Length = 201
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Frame = -3
Query: 730 VRRSFASHVGTARHRDETDYQHYEGHPEHEGI-------LGHPDF-GRSVV------QEQ 593
+RR+ HV R + H+ G +H+ + L P F G+ V+ +EQ
Sbjct: 115 MRRNMRRHVHPRRGAVLGNGGHHRGRHDHDDLDNVARVKLSVPKFTGKDVLDAYLYWEEQ 174
Query: 592 SDETHRHHQLTHQDRVHL 539
D+ R H L+HQ RV+L
Sbjct: 175 CDQIFRVHNLSHQRRVNL 192
>04_04_0213 -
23672541-23672558,23672706-23672855,23672932-23673017,
23673083-23673227
Length = 132
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +1
Query: 406 ASNLHMAAQVTVNRAISHRTTQSAKMAKSRVSISRKIYTQGFHPKGV-RDPDVSADG--- 573
AS+ AA + RA + T +AK + + +++ G +G RD D DG
Sbjct: 43 ASSSQPAAAAALQRAETTATMYTAKELREKQDVTKGFLIWGVAGRGGGRDHDDDDDGVRR 102
Query: 574 ---DDGFHRSVPVPPTDQSLGGPKSLHVL 651
+ G HR+ P PP ++H L
Sbjct: 103 GVGEGGAHRAGPDPPPRPGAQAAVTIHFL 131
>04_01_0031 + 381389-381841
Length = 150
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +3
Query: 231 RIKADRTLGR---GVPARWTVPARWTIPTGWRLPARWSLPSRRSVSPGWSIPAGGYAP 395
R+ RT GR GVP T RW P L W+LP S P + AP
Sbjct: 49 RLPLPRTDGRTRTGVPPPRTRERRWCTPRTSTLRREWALPDTASPPPPLPLEPAPSAP 106
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -3
Query: 769 GSLRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHP-DFGRSVVQEQ 593
G R RE G++ E ASH H E D + G P+H+ G+ + +S +
Sbjct: 386 GHDRHRERGRDRERDYERASHERDRGHMHERDAEFANGEPKHDQEYGYNYEQHKSHDAYE 445
Query: 592 SDETHRHHQLTHQ 554
++ + RH +Q
Sbjct: 446 TERSKRHEHEYYQ 458
>12_02_0065 -
13109652-13110746,13110843-13111762,13139462-13139528,
13139607-13139675,13139877-13140020,13140100-13140171,
13140316-13140387,13140466-13140558,13140655-13140726,
13140809-13140925
Length = 906
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 264 VPARWTVPARWTIPTGWRLPARWSLPSRRS 353
V A PAR P+ WR P R S PSRRS
Sbjct: 6 VAAAAAAPARSRWPS-WRTPPRSSTPSRRS 34
>10_08_0611 - 19213994-19214053,19214776-19215732
Length = 338
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 589 RSVPVPPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRRETQSSDELHIPGHLHGSA 762
R+ P PP GPK L ++G + D L+HR +E L + G LH A
Sbjct: 35 RAAPFPP------GPKPLPIVGNMAMMDQLTHRGLAALAKEYGGLMHLRL-GRLHAFA 85
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 541 GVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKS 639
G DP AD +DG P PP+ G +S
Sbjct: 549 GTLDPMADADANDGSQMQTPAPPSPAGEGRRRS 581
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Frame = +1
Query: 454 SHRTTQSAKMAKSRV-SIS--RKIYTQGFHPKGVRD-PDVSADGDDGFHRSVP----VPP 609
+ + + AK K ++ S+ RK QG KG D PD++ +GD+GF +S V P
Sbjct: 692 AQKEKERAKQKKEQIESVKKWRKQRQQGGFAKGNDDGPDLNFEGDEGFKQSKKKRPGVSP 751
Query: 610 TDQSLG 627
D+S G
Sbjct: 752 GDRSGG 757
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +1
Query: 586 HRSVPVPPTDQ----SLGGPKSLHVLGGLHSADSLSHRDGVL 699
H++ P PP DQ SLG S L LH++ S S D +L
Sbjct: 17 HQASPPPPIDQQAAESLGKSPSASDLTALHASSSSSAADALL 58
>03_04_0105 -
17322276-17322399,17322516-17322740,17323388-17323588,
17324705-17324794,17324945-17325059,17325238-17325439
Length = 318
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 65 WLCSSKATKIVFVK*INCEVHCVEV*TSGDCKWNFNKTA-LEKLNSKD 205
W C+ +A+ +F+ + ++H + + DC W F +EK KD
Sbjct: 105 WTCTCRASDSIFIDCYSDDLHYAHIQSLLDCSWWFRVVRDVEKDLKKD 152
>03_01_0510 +
3841630-3844089,3844235-3844358,3844641-3844786,
3844861-3844958,3845313-3845502
Length = 1005
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 640 LHVLGGLHSAD-SLSHRDGVLSRRETQSSDELHIPGHLHGSAS 765
L L LH + +S R GV+ RRE Q+ E + HG +S
Sbjct: 245 LRSLSPLHGSSLKVSRRPGVIGRREPQALLEYSVNSSEHGPSS 287
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,173,407
Number of Sequences: 37544
Number of extensions: 508518
Number of successful extensions: 1840
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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