Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021705
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 66 4e-11
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 66 4e-11
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 46 2e-05
Z92826-7|CAD90171.2| 99|Caenorhabditis elegans Hypothetical pr... 30 2.1
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 30 2.1
U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL110485-15|CAB60363.2| 671|Caenorhabditis elegans Hypothetical... 29 3.7
AJ414404-1|CAC92449.1| 671|Caenorhabditis elegans dihydroxyacet... 29 3.7
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 29 3.7
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 29 4.9
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z92826-6|CAM06583.1| 111|Caenorhabditis elegans Hypothetical pr... 28 6.5
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 28 6.5
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 28 6.5
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 28 6.5
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 28 6.5
AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein. 28 6.5
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 28 6.5
Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.6
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 74.1 bits (174), Expect = 1e-13
Identities = 31/88 (35%), Positives = 54/88 (61%)
Frame = +2
Query: 503 FHEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 682
F +++R AF+RKV+ ++ +T F + + P + WV N +++++A IV +V
Sbjct: 22 FSSQTVRAAFVRKVFMLVTIMFAITAAFCVIPMVSEPFQDWVKNNFWVYFIAIIVFLVVA 81
Query: 683 IAMACCPDVRRKAPTNFIFLAIFTAAQA 766
IA++CC ++RR+ P N I L IFT + A
Sbjct: 82 IALSCCGNLRRQFPVNIILLTIFTLSAA 109
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FRFHEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIV 676
F+F +K++R AF+RKV++++ L + + H T V +N ++ ++++ V
Sbjct: 72 FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGSYVIFFV 131
Query: 677 CLIAMACCPDVRRKAPTNFIFLAIFTAA 760
+++ CC VRRK P N I IFT A
Sbjct: 132 TYLSLVCCEGVRRKFPVNLIVTGIFTLA 159
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FRFHEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIV 676
F+F +K++R AF+RKV++++ L + + H T V +N ++ ++++ V
Sbjct: 72 FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGSYVIFFV 131
Query: 677 CLIAMACCPDVRRKAPTNFIFLAIFTAA 760
+++ CC VRRK P N I IFT A
Sbjct: 132 TYLSLVCCEGVRRKFPVNLIVTGIFTLA 159
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/85 (34%), Positives = 44/85 (51%)
Frame = +2
Query: 512 KSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAM 691
+ IR AF+RKV I+ QL+ T+G A +Y+ P + Q W+ F L+ + +
Sbjct: 67 RMIRIAFLRKVLGIVGFQLLFTIGICAA-IYNIPNSNQLLQKHA--WIVFPNLLGSIALI 123
Query: 692 ACCPDVRRKAPTNFIFLAIFTAAQA 766
R+ P N++ LA FTA QA
Sbjct: 124 IALHVYAREVPLNYVLLAAFTAVQA 148
>Z92826-7|CAD90171.2| 99|Caenorhabditis elegans Hypothetical
protein C18D11.6 protein.
Length = 99
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 273 RWTVPARWTIPTGWRLPARWSLPSRRSVSPGWSIPAGGY 389
RW P W P GW W L R G+ +P GG+
Sbjct: 55 RWG-PWGWHRPFGWGFHRPWGLGWHRPFFGGYGMPFGGF 92
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/66 (27%), Positives = 24/66 (36%)
Frame = -3
Query: 751 EDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHPDFGRSVVQEQSDETHRH 572
ED E++ R H + Q GHPEH V + + HRH
Sbjct: 174 EDHHEHQKRSEHVEHQAEMHEHQKRSTQEVSGHPEH----------HLVKRSGGEGGHRH 223
Query: 571 HQLTHQ 554
H+ T Q
Sbjct: 224 HRSTDQ 229
>U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical
protein T01B11.1 protein.
Length = 343
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 617 KVWVAQNPFMFWVAFIVLIV--CLIAMACCPDVRRKAPTNFIFLAIFTAA 760
K+W+ + FWV I +++ L+A A ++RK F+FL AA
Sbjct: 8 KLWMFISKCQFWVILITVLISLLLVAKAFYNLMKRKRSNYFVFLISIIAA 57
>AL110485-15|CAB60363.2| 671|Caenorhabditis elegans Hypothetical
protein Y46G5A.21 protein.
Length = 671
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 188 KLNSKDQPNYESMYQNQGGPYPRAGRTRKVDRTRKVDHTHRVEATRKV-ELTLQEERIPR 364
++N + N+ +N+GGP+ T+ KV + + ++ + L+ R+
Sbjct: 10 QINYPEYENFLEHLKNKGGPFKFVTATKNFPVGSKVGTAPKTRSLAEIRKSVLESPRVKS 69
Query: 365 V--EHTRRRICAP 397
V E T RR C+P
Sbjct: 70 VISEETLRRKCSP 82
>AJ414404-1|CAC92449.1| 671|Caenorhabditis elegans dihydroxyacetone
phosphate acyltransferaseprotein.
Length = 671
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 188 KLNSKDQPNYESMYQNQGGPYPRAGRTRKVDRTRKVDHTHRVEATRKV-ELTLQEERIPR 364
++N + N+ +N+GGP+ T+ KV + + ++ + L+ R+
Sbjct: 10 QINYPEYENFLEHLKNKGGPFKFVTATKNFPVGSKVGTAPKTRSLAEIRKSVLESPRVKS 69
Query: 365 V--EHTRRRICAP 397
V E T RR C+P
Sbjct: 70 VISEETLRRKCSP 82
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Frame = +3
Query: 183 WKN*TRRTNQITRACIRIKADRTLG----RGVPARWTVPARWTIPTGWRLPARWSLPSRR 350
WK TR T R IKA T R A WT+ A R+P P+ R
Sbjct: 173 WKVSTRGTTNTNR---NIKAHETTRGFTQRPTAAGWTIRANGITRGQTRVPGTTREPTHR 229
Query: 351 SVSPGWSIPAGG 386
+ GW+ A G
Sbjct: 230 PTTAGWTNGANG 241
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 641 FMFWVAFIVLIVCLIAMACCPDVRRKAPT 727
F+FW + +++VC+I + C V K T
Sbjct: 210 FLFWSSLFLMLVCVILLGCSRKVADKQVT 238
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -3
Query: 700 TARHRDETDYQHYEGHPEHEGILGHPD-FGRSVVQEQSDETHRHHQLTHQDRVH 542
T++H + +Y G H G + + + G+ V D+ H H+ H H
Sbjct: 896 TSQHSNAQEYSTVHGSQTHRGSVVYDEPHGQVVYDIPHDQEHHHYDTVHVQHHH 949
>Z92826-6|CAM06583.1| 111|Caenorhabditis elegans Hypothetical
protein C18D11.9 protein.
Length = 111
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +3
Query: 273 RWTVPARWTI-PTGWRLPARWSLPSRRSVSPGWSIPAGGY 389
RW W P GW W RR G+ +P GGY
Sbjct: 56 RWGYYGGWGYRPYGWGYHRPWGWGWRRPYYGGYGMPYGGY 95
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 638 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA 760
P M +A++V++VC+ A+ CC RR + + A++ AA
Sbjct: 412 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA 450
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical protein
D1044.2c protein.
Length = 1090
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 638 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA 760
P M +A++V++VC+ A+ CC RR + + A++ AA
Sbjct: 962 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA 1000
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical protein
D1044.2a protein.
Length = 1051
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 638 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA 760
P M +A++V++VC+ A+ CC RR + + A++ AA
Sbjct: 962 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA 1000
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 604 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 708
PPT S GG S V+G + + R VLSRR
Sbjct: 724 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 758
>AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein.
Length = 279
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 604 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 708
PPT S GG S V+G + + R VLSRR
Sbjct: 41 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 75
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 604 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 708
PPT S GG S V+G + + R VLSRR
Sbjct: 724 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 758
>Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical
protein C31A11.6 protein.
Length = 330
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 545 YAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMACCPDVRRKAP 724
Y I MC + V M F+ RPT V +F+ +F++LI+C + P + P
Sbjct: 96 YFIPMC-VSVLMTMNRFFIVIRPTDQRVFGQRRIFFYSFLILILC-FTLLLIPRL-SYCP 152
Query: 725 TNFI 736
NF+
Sbjct: 153 VNFL 156
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 601 QEQSDETHRHHQLTHQDRVHLSD 533
Q ++DE +H QL H++ +HLS+
Sbjct: 32 QSRADEAIKHQQLLHRNLLHLSN 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,199,598
Number of Sequences: 27780
Number of extensions: 410403
Number of successful extensions: 1453
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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