Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021703
(725 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56E40 Cluster: PREDICTED: similar to CG3753-PA;... 89 8e-17
UniRef50_Q9VMX6 Cluster: CG3753-PA; n=2; Sophophora|Rep: CG3753-... 78 3e-13
UniRef50_Q6ZJE4 Cluster: DNA-dependent ATPase A-like protein; n=... 77 4e-13
UniRef50_UPI0000DB7F10 Cluster: PREDICTED: similar to SWI/SNF-re... 76 8e-13
UniRef50_Q4QAS2 Cluster: DNA helicase, putative; n=3; Leishmania... 71 2e-11
UniRef50_Q5FWF4 Cluster: Zinc finger Ran-binding domain-containi... 69 1e-10
UniRef50_UPI000049A5F0 Cluster: helicase; n=1; Entamoeba histoly... 68 2e-10
UniRef50_Q4RQN6 Cluster: Chromosome 2 SCAF15004, whole genome sh... 68 2e-10
UniRef50_Q7Q4J3 Cluster: ENSANGP00000006616; n=2; Culicidae|Rep:... 68 3e-10
UniRef50_Q3V3A8 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 67 5e-10
UniRef50_Q8BJL0 Cluster: SWI/SNF-related matrix-associated actin... 67 5e-10
UniRef50_Q9NZC9 Cluster: SWI/SNF-related matrix-associated actin... 67 5e-10
UniRef50_Q4DMB8 Cluster: DNA helicase, putative; n=3; Trypanosom... 66 8e-10
UniRef50_A7T6C9 Cluster: Predicted protein; n=1; Nematostella ve... 66 1e-09
UniRef50_Q9FF11 Cluster: Similarity to HepA-related protein Harp... 63 6e-09
UniRef50_Q8SRQ7 Cluster: BELONGS TO THE SNF2/RAD54 HELICASE FAMI... 63 6e-09
UniRef50_Q54TE8 Cluster: TBP-associated factor A; n=2; Dictyoste... 62 1e-08
UniRef50_Q4N163 Cluster: DNA helicase, putative; n=2; Theileria|... 62 1e-08
UniRef50_A7APP3 Cluster: Helicase conserved C-terminal domain co... 62 2e-08
UniRef50_A7NW03 Cluster: Chromosome chr5 scaffold_2, whole genom... 61 2e-08
UniRef50_Q5RFW6 Cluster: Novel protein similar to vertebrate SWI... 61 3e-08
UniRef50_Q385P2 Cluster: SNF2 DNA repair protein, putative; n=1;... 60 5e-08
UniRef50_Q69WP6 Cluster: SWI/SNF-related matrix-associated actin... 58 2e-07
UniRef50_A5BA98 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q8MNV7 Cluster: Putative SMARCAL1-like protein; n=4; Ca... 58 2e-07
UniRef50_A2EQK0 Cluster: Type III restriction enzyme, res subuni... 57 4e-07
UniRef50_Q5CS57 Cluster: HARP like SWI/SNF ATpase; n=2; Cryptosp... 56 1e-06
UniRef50_UPI000049831B Cluster: SNF2 family protein; n=1; Entamo... 55 2e-06
UniRef50_A0E2Y8 Cluster: Chromosome undetermined scaffold_75, wh... 54 3e-06
UniRef50_Q8IDD0 Cluster: DNA helicase; n=7; Plasmodium|Rep: DNA ... 53 6e-06
UniRef50_Q86AR9 Cluster: Similar to Plasmodium falciparum. DNA h... 53 8e-06
UniRef50_A0EVZ1 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q3VKT7 Cluster: Helicase, C-terminal; n=3; Bacteria|Rep... 51 3e-05
UniRef50_UPI0000E8097B Cluster: PREDICTED: hypothetical protein;... 50 8e-05
UniRef50_A4SAW4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 50 8e-05
UniRef50_A0L5R1 Cluster: Helicase domain protein; n=8; Bacteria|... 49 1e-04
UniRef50_A7JCU6 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_A7HFJ5 Cluster: Non-specific serine/threonine protein k... 48 2e-04
UniRef50_Q23RY4 Cluster: SNF2 family N-terminal domain containin... 48 2e-04
UniRef50_Q1NL49 Cluster: SNF2-related:Helicase-like:SWIM Zn-fing... 48 2e-04
UniRef50_A7CQS2 Cluster: Helicase domain protein; n=1; Opitutace... 48 2e-04
UniRef50_Q6LFM0 Cluster: DNA helicase, putative; n=1; Plasmodium... 48 3e-04
UniRef50_Q4AEQ9 Cluster: SNF2-related:Helicase, C-terminal:Type ... 47 4e-04
UniRef50_Q7UGF2 Cluster: Helicase, Snf2 family; n=1; Pirellula s... 46 7e-04
UniRef50_A0ZFG2 Cluster: ATP-dependent helicase HEPA; n=2; Bacte... 46 7e-04
UniRef50_A3IFT7 Cluster: Helicase, putative; n=1; Bacillus sp. B... 46 0.001
UniRef50_A5K1P4 Cluster: Helicase, putative; n=1; Plasmodium viv... 46 0.001
UniRef50_A3XZ11 Cluster: DEAD/DEAH box helicase-like; n=1; Vibri... 45 0.002
UniRef50_A3J085 Cluster: ATP-dependent helicase HEPA; n=1; Flavo... 45 0.002
UniRef50_A3DCS9 Cluster: Helicase-like protein; n=9; cellular or... 45 0.002
UniRef50_Q9SX64 Cluster: F11A17.14 protein; n=1; Arabidopsis tha... 45 0.002
UniRef50_A0RYJ5 Cluster: Superfamily II DNA/RNA helicase, SNF2 f... 45 0.002
UniRef50_A6PRG3 Cluster: SNF2-related protein; n=1; Victivallis ... 44 0.003
UniRef50_A2SSR6 Cluster: Helicase domain protein; n=3; cellular ... 44 0.004
UniRef50_Q4Q417 Cluster: Transcription activator; n=7; Trypanoso... 44 0.005
UniRef50_Q4DM32 Cluster: DNA excision/repair protein SNF2, putat... 44 0.005
UniRef50_Q11KY1 Cluster: Helicase-like; n=14; Bacteria|Rep: Heli... 43 0.007
UniRef50_Q9LJK7 Cluster: DNA repair protein RAD54-like; n=6; Mag... 43 0.007
UniRef50_Q0SG70 Cluster: Probable helicase; n=1; Rhodococcus sp.... 43 0.009
UniRef50_A4BSS8 Cluster: Helicase, SNF2 family protein; n=1; Nit... 42 0.012
UniRef50_A0K1K3 Cluster: SNF2-related protein; n=2; Arthrobacter... 42 0.021
UniRef50_A6TUP2 Cluster: Non-specific serine/threonine protein k... 41 0.027
UniRef50_Q4QH75 Cluster: SNF2/RAD54 related DNA helicase, putati... 41 0.027
UniRef50_A3LUA0 Cluster: Transcriptional accessory protein invol... 41 0.027
UniRef50_Q4SEC2 Cluster: Chromosome 3 SCAF14622, whole genome sh... 41 0.036
UniRef50_Q9K8T9 Cluster: SNF2 helicase; n=1; Bacillus halodurans... 41 0.036
UniRef50_Q6LF68 Cluster: Iswi protein homologue; n=7; Plasmodium... 40 0.047
UniRef50_A5K279 Cluster: SNF2 family N-terminal domain containin... 40 0.047
UniRef50_Q7UDX7 Cluster: Swi/snf family helicase_2; n=2; Plancto... 40 0.063
UniRef50_Q73RS9 Cluster: Snf2 family protein; n=1; Treponema den... 40 0.063
UniRef50_Q1LR46 Cluster: SNF2-related; n=3; Cupriavidus|Rep: SNF... 40 0.063
UniRef50_A6DU14 Cluster: Putative uncharacterized protein; n=1; ... 40 0.063
UniRef50_A0QRQ0 Cluster: SNF2 domain protein; n=1; Mycobacterium... 40 0.063
UniRef50_Q8TG39 Cluster: Putative transcription regulator WdMOT1... 40 0.063
UniRef50_Q6CUF0 Cluster: Similarities with sgd|S0005717 Saccharo... 40 0.063
UniRef50_A6RZB8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.063
UniRef50_A4BN58 Cluster: Putative uncharacterized protein; n=1; ... 40 0.083
UniRef50_A1U3V7 Cluster: SNF2-related protein; n=1; Marinobacter... 40 0.083
UniRef50_Q9U2S8 Cluster: Putative uncharacterized protein; n=2; ... 40 0.083
UniRef50_Q4QB70 Cluster: Putative uncharacterized protein; n=1; ... 40 0.083
UniRef50_UPI0000E4713B Cluster: PREDICTED: similar to RAD26L hyp... 39 0.11
UniRef50_Q8A2F2 Cluster: Snf2 family helicase; n=3; Bacteroides|... 39 0.11
UniRef50_Q5YT78 Cluster: Putative helicase; n=1; Nocardia farcin... 39 0.11
UniRef50_Q31PW5 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 39 0.11
UniRef50_A3JHJ5 Cluster: Superfamily II DNA/RNA helicase; n=1; M... 39 0.11
UniRef50_Q9V0B0 Cluster: Putative DEAH ATP-dependent helicase; n... 39 0.11
UniRef50_UPI0000E45D81 Cluster: PREDICTED: similar to TBP-associ... 39 0.14
UniRef50_Q6MEA0 Cluster: Putative rapA, a bacterial member of th... 39 0.14
UniRef50_Q93HV4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.14
UniRef50_Q7Z2C2 Cluster: Snf2-related chromatin remodeling facto... 39 0.14
UniRef50_Q54RP8 Cluster: SNF2-related domain-containing protein;... 39 0.14
UniRef50_Q4Q7H3 Cluster: Putative uncharacterized protein; n=3; ... 39 0.14
UniRef50_Q229Q0 Cluster: SNF2 family N-terminal domain containin... 39 0.14
UniRef50_Q6BZT4 Cluster: Yarrowia lipolytica chromosome F of str... 39 0.14
UniRef50_Q5KI59 Cluster: Pol II transcription elongation factor,... 39 0.14
UniRef50_Q6BKC2 Cluster: Helicase SWR1; n=2; Saccharomycetaceae|... 39 0.14
UniRef50_Q59U81 Cluster: Helicase SWR1; n=3; Saccharomycetales|R... 39 0.14
UniRef50_Q1VZW1 Cluster: DEAD/DEAH box helicase-like protein; n=... 38 0.19
UniRef50_Q9ZW97 Cluster: F11M21.32 protein; n=8; Magnoliophyta|R... 38 0.19
UniRef50_Q5T890 Cluster: Chromosome 9 open reading frame 102; n=... 38 0.19
UniRef50_Q4PFZ7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q6FK48 Cluster: Helicase SWR1; n=1; Candida glabrata|Re... 38 0.19
UniRef50_UPI00004985DE Cluster: SNF2 family protein; n=1; Entamo... 38 0.25
UniRef50_Q6MMG5 Cluster: Putative helicase/SNF2 family domain pr... 38 0.25
UniRef50_Q9M378 Cluster: TATA box binding protein (TBP) associat... 38 0.25
UniRef50_Q00XM1 Cluster: SMCA5_HUMAN SWI/SNF related matrix asso... 38 0.25
UniRef50_A4RVY4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 38 0.25
UniRef50_Q54M42 Cluster: Putative uncharacterized protein; n=1; ... 38 0.25
UniRef50_Q4U971 Cluster: SWI/SNF-related chromatin remodelling f... 38 0.25
UniRef50_Q4N1W3 Cluster: DNA-dependent helicase, putative; n=1; ... 38 0.25
UniRef50_Q6BSL5 Cluster: Similar to CA0917|CaRAD16 Candida albic... 38 0.25
UniRef50_UPI0000499C2F Cluster: RAD54 DNA repair protein; n=1; E... 38 0.33
UniRef50_Q7UA61 Cluster: Possible helicase; n=13; Cyanobacteria|... 38 0.33
UniRef50_Q2LY67 Cluster: Swf/snf family helicase; n=1; Syntrophu... 38 0.33
UniRef50_Q1VHH4 Cluster: Lycopene cyclase; n=2; Psychroflexus to... 38 0.33
UniRef50_A4JV79 Cluster: Helicase domain protein; n=1; Burkholde... 38 0.33
UniRef50_Q4P6N3 Cluster: Putative uncharacterized protein; n=2; ... 38 0.33
UniRef50_A1D445 Cluster: TBP associated factor (Mot1), putative;... 38 0.33
UniRef50_P38144 Cluster: ISWI chromatin-remodeling complex ATPas... 38 0.33
UniRef50_O14981 Cluster: TATA-binding protein-associated factor ... 38 0.33
UniRef50_A2RUZ9 Cluster: LOC553504 protein; n=7; Danio rerio|Rep... 37 0.44
UniRef50_Q9X085 Cluster: Putative uncharacterized protein; n=1; ... 37 0.44
UniRef50_Q9ADE3 Cluster: Putative bifunctional protein; n=2; Str... 37 0.44
UniRef50_Q41HD1 Cluster: SNF2-related:Helicase, C-terminal:SWIM ... 37 0.44
UniRef50_A5MR54 Cluster: Snf2 family protein, putative; n=1; Str... 37 0.44
UniRef50_A5FJ22 Cluster: Non-specific serine/threonine protein k... 37 0.44
UniRef50_A4IT85 Cluster: Helicase, putative; n=1; Geobacillus th... 37 0.44
UniRef50_A0KM74 Cluster: SNF2 family helicase; n=2; Aeromonas|Re... 37 0.44
UniRef50_Q8GZN6 Cluster: SNF2P; n=9; Magnoliophyta|Rep: SNF2P - ... 37 0.44
UniRef50_Q55C32 Cluster: SNF2-related domain-containing protein;... 37 0.44
UniRef50_Q25342 Cluster: DNA excision/repair protein SNF2, putat... 37 0.44
UniRef50_Q8SUC5 Cluster: Similarity to THE ATPase COMPONENT OF T... 37 0.44
UniRef50_Q2FM80 Cluster: SNF2-related; n=2; Methanospirillum hun... 37 0.44
UniRef50_Q05471 Cluster: Helicase SWR1; n=3; Saccharomycetaceae|... 37 0.44
UniRef50_P32333 Cluster: TATA-binding protein-associated factor ... 37 0.44
UniRef50_Q8NQ17 Cluster: Superfamily II DNA/RNA helicases, SNF2 ... 37 0.58
UniRef50_A7HHN9 Cluster: Non-specific serine/threonine protein k... 37 0.58
UniRef50_A5GPG1 Cluster: Superfamily II DNA/RNA helicases, SNF2 ... 37 0.58
UniRef50_A1U817 Cluster: Helicase domain protein; n=1; Marinobac... 37 0.58
UniRef50_Q4UIX6 Cluster: DEAD-box family helicase, putative; n=2... 37 0.58
UniRef50_A7ASL0 Cluster: Snf2-related chromatin remodeling facto... 37 0.58
UniRef50_Q6CJ38 Cluster: Helicase SWR1; n=2; Saccharomycetaceae|... 37 0.58
UniRef50_Q4RCU9 Cluster: Chromosome undetermined SCAF18047, whol... 36 0.77
UniRef50_Q6APK0 Cluster: Probable helicase; n=1; Desulfotalea ps... 36 0.77
UniRef50_Q67RQ1 Cluster: SNF2 family helicase; n=1; Symbiobacter... 36 0.77
UniRef50_A6W6R2 Cluster: Non-specific serine/threonine protein k... 36 0.77
UniRef50_A3QE60 Cluster: SNF2-related protein; n=1; Shewanella l... 36 0.77
UniRef50_Q57UN8 Cluster: DNA excision repair protein, putative; ... 36 0.77
UniRef50_A0BUJ9 Cluster: Chromosome undetermined scaffold_13, wh... 36 0.77
UniRef50_Q9P793 Cluster: SHREC complex subunit Mit1; n=1; Schizo... 36 0.77
UniRef50_UPI00004991E9 Cluster: ATP-dependent chromatin remodeli... 36 1.0
UniRef50_Q4USY9 Cluster: Helicase; n=3; Xanthomonas campestris p... 36 1.0
UniRef50_A0W7K4 Cluster: SNF2-related; n=1; Geobacter lovleyi SZ... 36 1.0
UniRef50_Q5VNP2 Cluster: DNA repair helicase ERCC6-like; n=8; Or... 36 1.0
UniRef50_A7ANX1 Cluster: SNF2 family N-terminal domain containin... 36 1.0
UniRef50_A2EPF9 Cluster: Type III restriction enzyme, res subuni... 36 1.0
UniRef50_Q6MW11 Cluster: Related to helicase-DNA-binding protein... 36 1.0
UniRef50_A5DYP3 Cluster: Helicase SWR1; n=2; Saccharomycetaceae|... 36 1.0
UniRef50_Q8U3A6 Cluster: ATP-dependent RNA helicase hepa, putati... 36 1.0
UniRef50_Q9VTE2 Cluster: Protein suppressor of underreplication;... 36 1.0
UniRef50_O43065 Cluster: Probable helicase mot1; n=4; Schizosacc... 36 1.0
UniRef50_UPI0000D56886 Cluster: PREDICTED: hypothetical protein;... 36 1.3
UniRef50_UPI000069FCD2 Cluster: CDNA FLJ90238 fis, clone NT2RM20... 36 1.3
UniRef50_Q7WXX1 Cluster: DNA helicase; n=11; Pseudomonas|Rep: DN... 36 1.3
UniRef50_Q21RH3 Cluster: SNF2-related; n=1; Rhodoferax ferriredu... 36 1.3
UniRef50_A1ASL3 Cluster: SNF2-related protein; n=1; Pelobacter p... 36 1.3
UniRef50_Q01KF9 Cluster: OSIGBa0158F05.11 protein; n=4; Oryza sa... 36 1.3
UniRef50_Q01FM8 Cluster: Chromodomain-helicase-DNA-binding prote... 36 1.3
UniRef50_Q4QA20 Cluster: DNA repair protein, putative; n=3; Leis... 36 1.3
UniRef50_A7RQM3 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.3
UniRef50_Q2TX77 Cluster: Helicase-like transcription factor HLTF... 36 1.3
UniRef50_A7TGL6 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_A2BGR3 Cluster: Novel protein; n=7; Eumetazoa|Rep: Nove... 35 1.8
UniRef50_Q67KZ1 Cluster: Snf2 family helicase-like protein; n=1;... 35 1.8
UniRef50_A6DMQ1 Cluster: Swf/snf family helicase; n=1; Lentispha... 35 1.8
UniRef50_A1K3Q1 Cluster: SWI/SNF family helicase; n=3; Betaprote... 35 1.8
UniRef50_Q384V0 Cluster: SNF2 DNA repair protein, putative; n=3;... 35 1.8
UniRef50_Q17IV5 Cluster: Chromodomain helicase DNA binding prote... 35 1.8
UniRef50_UPI00015B571A Cluster: PREDICTED: similar to conserved ... 35 2.4
UniRef50_UPI0000E81954 Cluster: PREDICTED: similar to RP11-346B7... 35 2.4
UniRef50_UPI0000499756 Cluster: DNA repair protein RAD54; n=1; E... 35 2.4
UniRef50_UPI0000ECC53B Cluster: CDNA FLJ90238 fis, clone NT2RM20... 35 2.4
UniRef50_Q6MB41 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A4JVW1 Cluster: SNF2-related protein; n=1; Burkholderia... 35 2.4
UniRef50_Q9VC94 Cluster: CG5728-PA; n=2; Sophophora|Rep: CG5728-... 35 2.4
UniRef50_Q7QSX1 Cluster: GLP_44_15227_12651; n=1; Giardia lambli... 35 2.4
UniRef50_Q5CIW7 Cluster: SNF2 domain/helicase domain-containing ... 35 2.4
UniRef50_Q57Z97 Cluster: Transcription activator, putative; n=1;... 35 2.4
UniRef50_Q5K7U5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q2UE80 Cluster: Chromatin remodeling complex WSTF-ISWI;... 35 2.4
UniRef50_Q2HGP4 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q9H4L7 Cluster: SWI/SNF-related matrix-associated actin... 35 2.4
UniRef50_P79051 Cluster: DNA repair protein rhp16; n=5; Ascomyco... 35 2.4
UniRef50_P31244 Cluster: DNA repair protein RAD16; n=5; Dikarya|... 35 2.4
UniRef50_Q9HCK8 Cluster: Chromodomain-helicase-DNA-binding prote... 35 2.4
UniRef50_UPI0000DB6E3E Cluster: PREDICTED: similar to CG5899-PA,... 34 3.1
UniRef50_UPI00004997F5 Cluster: helicase; n=1; Entamoeba histoly... 34 3.1
UniRef50_Q4T1X3 Cluster: Chromosome 1 SCAF10457, whole genome sh... 34 3.1
UniRef50_Q1U6X3 Cluster: SNF2-related:Helicase-like:Zinc finger,... 34 3.1
UniRef50_A4IMU6 Cluster: Patative DNA/RNA helicase SNF2 family; ... 34 3.1
UniRef50_A4C3E7 Cluster: Helicase; n=1; Pseudoalteromonas tunica... 34 3.1
UniRef50_A1VL85 Cluster: SNF2-related protein; n=6; Bacteria|Rep... 34 3.1
UniRef50_Q00ZA8 Cluster: Putative SNF2 domain-containing protein... 34 3.1
UniRef50_A4S4D1 Cluster: Predicted protein; n=1; Ostreococcus lu... 34 3.1
UniRef50_Q4YWQ3 Cluster: DNA repair protein rhp16, putative; n=8... 34 3.1
UniRef50_A2EY36 Cluster: SNF2 family N-terminal domain containin... 34 3.1
UniRef50_Q2NKX8 Cluster: Excision repair cross-complementing rod... 34 3.1
UniRef50_Q8SQP6 Cluster: RAD26-LIKE DNA REPAIR AND RECOMBINATION... 34 3.1
UniRef50_Q8NIR3 Cluster: Related to DNA repair protein RAD26; n=... 34 3.1
UniRef50_Q9Y620 Cluster: DNA repair and recombination protein RA... 34 3.1
UniRef50_Q08773 Cluster: ISWI chromatin-remodeling complex ATPas... 34 3.1
UniRef50_UPI000155BECB Cluster: PREDICTED: similar to similar nu... 34 4.1
UniRef50_UPI0000F2008D Cluster: PREDICTED: similar to Rad54b; n=... 34 4.1
UniRef50_UPI0000F1D9E5 Cluster: PREDICTED: similar to chromodoma... 34 4.1
UniRef50_UPI00005103F6 Cluster: COG0553: Superfamily II DNA/RNA ... 34 4.1
UniRef50_Q9PLL8 Cluster: Helicase, Snf2 family; n=11; Chlamydial... 34 4.1
UniRef50_Q7NAF6 Cluster: HepA/SNF2; n=1; Mycoplasma gallisepticu... 34 4.1
UniRef50_Q47YP1 Cluster: Snf2 family protein; n=1; Colwellia psy... 34 4.1
UniRef50_Q11P03 Cluster: Superfamily II DNA/RNA helicase, SNF2 f... 34 4.1
UniRef50_A5ZF77 Cluster: Putative uncharacterized protein; n=2; ... 34 4.1
UniRef50_A5P8I0 Cluster: SNF2 family helicase; n=2; Alphaproteob... 34 4.1
UniRef50_A2X9X1 Cluster: Putative uncharacterized protein; n=2; ... 34 4.1
UniRef50_Q54UZ8 Cluster: CHD gene family protein containing chro... 34 4.1
UniRef50_Q383K6 Cluster: SNF2 DNA repair protein, putative; n=1;... 34 4.1
UniRef50_A5K729 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_A0BMB8 Cluster: Chromosome undetermined scaffold_116, w... 34 4.1
UniRef50_Q1DUU1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_A4RF63 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q9S775 Cluster: CHD3-type chromatin-remodeling factor P... 34 4.1
UniRef50_UPI00015B6257 Cluster: PREDICTED: similar to chromodoma... 33 5.4
UniRef50_UPI00015B4F17 Cluster: PREDICTED: similar to PASG; n=2;... 33 5.4
UniRef50_UPI000050FE1B Cluster: COG0553: Superfamily II DNA/RNA ... 33 5.4
UniRef50_Q4SS19 Cluster: Chromosome undetermined SCAF14482, whol... 33 5.4
UniRef50_Q6NGZ2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_Q1NUR8 Cluster: SNF2-related:Helicase-like; n=2; delta ... 33 5.4
UniRef50_Q15SM4 Cluster: SNF2-related; n=1; Pseudoalteromonas at... 33 5.4
UniRef50_Q08SL4 Cluster: Snf2 family protein; n=2; Cystobacterin... 33 5.4
UniRef50_Q043T7 Cluster: Superfamily II DNA/RNA helicase, SNF2 f... 33 5.4
UniRef50_Q02W90 Cluster: Superfamily II DNA/RNA helicase, SNF2 f... 33 5.4
UniRef50_A6L6P6 Cluster: Helicase with SNF2 domain; n=1; Bactero... 33 5.4
UniRef50_A5W9C5 Cluster: Non-specific serine/threonine protein k... 33 5.4
UniRef50_Q5BN47 Cluster: SPLAYED splice variant; n=8; core eudic... 33 5.4
UniRef50_A7APE4 Cluster: DNA repair protein rhp16, putative; n=1... 33 5.4
UniRef50_A3FPW3 Cluster: SNF2 helicase, putative; n=3; Cryptospo... 33 5.4
UniRef50_A2FYN0 Cluster: SNF2 family N-terminal domain containin... 33 5.4
UniRef50_A2DYG3 Cluster: F/Y-rich N-terminus family protein; n=1... 33 5.4
UniRef50_A2DMS8 Cluster: Type III restriction enzyme, res subuni... 33 5.4
UniRef50_A0DRX8 Cluster: Chromosome undetermined scaffold_61, wh... 33 5.4
UniRef50_A6SS74 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 5.4
UniRef50_UPI00015B5C83 Cluster: PREDICTED: similar to ENSANGP000... 33 7.2
UniRef50_UPI000023F48B Cluster: hypothetical protein FG10174.1; ... 33 7.2
UniRef50_UPI000065ED49 Cluster: CDNA FLJ90238 fis, clone NT2RM20... 33 7.2
UniRef50_Q7ULR2 Cluster: Probable swi/snf family helicase 2; n=1... 33 7.2
UniRef50_Q5ZVT3 Cluster: Inner membrane protein PLUS sensory box... 33 7.2
UniRef50_Q3WI09 Cluster: SNF2 related domain:Helicase, C-termina... 33 7.2
UniRef50_Q1D3C7 Cluster: Helicase/SNF2 domain protein; n=1; Myxo... 33 7.2
UniRef50_A5P4J6 Cluster: SNF2-related protein; n=2; Rhizobiales|... 33 7.2
UniRef50_A3TJ52 Cluster: SNF2-like; n=1; Janibacter sp. HTCC2649... 33 7.2
UniRef50_A1ZWE6 Cluster: ATP-dependent helicase; n=1; Microscill... 33 7.2
UniRef50_A1FQG4 Cluster: SNF2-related; n=20; Pseudomonadaceae|Re... 33 7.2
UniRef50_Q7XK93 Cluster: OSJNBb0020J19.17 protein; n=2; Oryza sa... 33 7.2
UniRef50_Q9NDJ2 Cluster: Helicase DOMINO A; n=14; cellular organ... 33 7.2
UniRef50_Q7RM86 Cluster: Chromodomain-helicase-DNA-binding prote... 33 7.2
UniRef50_Q7QUW9 Cluster: GLP_577_38920_45159; n=1; Giardia lambl... 33 7.2
UniRef50_Q66S20 Cluster: TBP-associated factor 172; n=1; Oikople... 33 7.2
UniRef50_Q4UHZ3 Cluster: Recombinational repair (RAD54 homologue... 33 7.2
UniRef50_Q17L58 Cluster: E1a binding protein P400; n=2; cellular... 33 7.2
UniRef50_Q7SBI2 Cluster: Putative uncharacterized protein NCU061... 33 7.2
UniRef50_Q7S6P9 Cluster: Putative uncharacterized protein NCU047... 33 7.2
UniRef50_Q0UNL0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_A6S3I1 Cluster: Putative uncharacterized protein; n=2; ... 33 7.2
UniRef50_A5YS53 Cluster: Helicase, C-terminal; n=1; uncultured h... 33 7.2
UniRef50_P31380 Cluster: Uncharacterized ATP-dependent helicase ... 33 7.2
UniRef50_Q09772 Cluster: Meiotic recombination protein rdh54; n=... 33 7.2
UniRef50_Q7SAR3 Cluster: Putative uncharacterized protein NCU079... 26 7.6
UniRef50_UPI00006CB005 Cluster: SNF2 family N-terminal domain co... 33 9.5
UniRef50_UPI00004995DE Cluster: chromodomain-helicase-DNA-bindin... 33 9.5
UniRef50_UPI000023D539 Cluster: hypothetical protein FG01275.1; ... 33 9.5
UniRef50_Q4SCU8 Cluster: Chromosome undetermined SCAF14648, whol... 33 9.5
UniRef50_Q8EP30 Cluster: Helicase; n=1; Oceanobacillus iheyensis... 33 9.5
UniRef50_Q6KHX7 Cluster: Swf/snf family helicase-like protein; n... 33 9.5
UniRef50_Q3M125 Cluster: Type III restriction enzyme, res subuni... 33 9.5
UniRef50_Q7P5E7 Cluster: SWF/SNF family helicase; n=3; Fusobacte... 33 9.5
UniRef50_Q1QC66 Cluster: SNF2-related; n=1; Psychrobacter cryoha... 33 9.5
UniRef50_Q0SGG4 Cluster: Probable helicase; n=2; Nocardiaceae|Re... 33 9.5
UniRef50_A6G1Q7 Cluster: Swf/snf family helicase; n=1; Plesiocys... 33 9.5
UniRef50_A6DIK8 Cluster: SNF2-related protein; n=2; Bacteria|Rep... 33 9.5
UniRef50_A2UHS9 Cluster: Helicase domain protein; n=3; Escherich... 33 9.5
UniRef50_A4S6V0 Cluster: Predicted protein; n=3; Ostreococcus|Re... 33 9.5
UniRef50_A4S1Y4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 9.5
UniRef50_A2Y0B5 Cluster: Putative uncharacterized protein; n=2; ... 33 9.5
UniRef50_Q9VPL9 Cluster: CG3696-PA, isoform A; n=12; Diptera|Rep... 33 9.5
UniRef50_Q8IJG6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_Q4Q629 Cluster: Helicase-like protein; n=2; Leishmania|... 33 9.5
UniRef50_Q241C2 Cluster: HSA family protein; n=5; Oligohymenopho... 33 9.5
UniRef50_Q16JW5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_A7RK66 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.5
UniRef50_A0DH08 Cluster: Chromosome undetermined scaffold_5, who... 33 9.5
UniRef50_Q75EC7 Cluster: AAR147Wp; n=1; Eremothecium gossypii|Re... 33 9.5
UniRef50_Q6E6B6 Cluster: Global transcription activator; n=1; An... 33 9.5
UniRef50_Q6C733 Cluster: Yarrowia lipolytica chromosome E of str... 33 9.5
UniRef50_Q5K6Z9 Cluster: DNA dependent ATPase, putative; n=2; Fi... 33 9.5
UniRef50_Q4WV83 Cluster: Nucleosome remodeling complex ATPase su... 33 9.5
UniRef50_Q4P0X0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_A7EMR9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_A6SHP4 Cluster: Putative uncharacterized protein; n=2; ... 33 9.5
UniRef50_A4RMS0 Cluster: Putative uncharacterized protein; n=4; ... 33 9.5
UniRef50_A3LW89 Cluster: Helicase; n=3; Saccharomycetales|Rep: H... 33 9.5
UniRef50_Q92698 Cluster: DNA repair and recombination protein RA... 33 9.5
UniRef50_O12944 Cluster: DNA repair and recombination protein RA... 33 9.5
>UniRef50_UPI0000D56E40 Cluster: PREDICTED: similar to CG3753-PA;
n=2; Endopterygota|Rep: PREDICTED: similar to CG3753-PA
- Tribolium castaneum
Length = 661
Score = 89.4 bits (212), Expect = 8e-17
Identities = 37/72 (51%), Positives = 55/72 (76%)
Frame = +3
Query: 510 IPPYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGK 689
+P ++L + ++ D NIDL ++ + L+PFQ++GVRFGI ++GRC+IADDMGLGK
Sbjct: 142 LPVFILSCVNKERTDYSNIDLSGLDPELGGALMPFQQEGVRFGIDKNGRCLIADDMGLGK 201
Query: 690 TYQALAIASYYR 725
T+QAL IA+YY+
Sbjct: 202 TFQALGIANYYK 213
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = +1
Query: 304 VVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAP 483
VVTG LI EDRF V S F P I IFKTIP+R Y KT+ W+F + D++ L++K+
Sbjct: 73 VVTGKTSLIKEDRFVVELSGFSTPAIEIFKTIPTRNYNGKTRNWDFHVRDHDALIAKLQT 132
Query: 484 LAPHVVL 504
L P+V++
Sbjct: 133 LRPNVLV 139
>UniRef50_Q9VMX6 Cluster: CG3753-PA; n=2; Sophophora|Rep: CG3753-PA
- Drosophila melanogaster (Fruit fly)
Length = 755
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/72 (51%), Positives = 49/72 (68%)
Frame = +3
Query: 510 IPPYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGK 689
IP VL + + V P+ L IE + +L+PFQ+DGV F IA+ GR MI D+MGLGK
Sbjct: 216 IPKKVLDLCGQPPVVPERSVLASIEPKLADQLMPFQQDGVCFAIAQKGRIMICDEMGLGK 275
Query: 690 TYQALAIASYYR 725
TYQALA+A Y++
Sbjct: 276 TYQALAVADYFK 287
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/85 (31%), Positives = 46/85 (54%)
Frame = +1
Query: 244 KPSILTPRSDQTTQNVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADK 423
KP++ + V + +T N+YLIS RF S + L+ +FK +P++ Y +
Sbjct: 127 KPTLSLSSDKEKPVAVLLGNSITCNLYLISTHRFAAQTSGYHEQLVTVFKNMPTKCYDGQ 186
Query: 424 TKLWNFSIEDYNQLMSKVAPLAPHV 498
T++W+F + DY L + A L P+V
Sbjct: 187 TRIWSFDLSDYQSLKTHAADLKPYV 211
>UniRef50_Q6ZJE4 Cluster: DNA-dependent ATPase A-like protein; n=4;
Oryza sativa|Rep: DNA-dependent ATPase A-like protein -
Oryza sativa subsp. japonica (Rice)
Length = 361
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +3
Query: 528 KILKEQTVDPKNID--LMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQA 701
K E K +D LM + +R LLPFQ +GV+FG+ RHGRC+IAD+MGLGKT QA
Sbjct: 171 KFFAESCASDKEVDGLLMKLPQHLRDALLPFQLEGVKFGLRRHGRCLIADEMGLGKTLQA 230
Query: 702 LAIASYYR 725
+AIA Y+
Sbjct: 231 IAIACCYK 238
>UniRef50_UPI0000DB7F10 Cluster: PREDICTED: similar to
SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
(Sucrose nonfermenting protein 2-like 1) (HepA-related
protein) (mharp), partial; n=1; Apis mellifera|Rep:
PREDICTED: similar to SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like
protein 1 (Sucrose nonfermenting protein 2-like 1)
(HepA-related protein) (mharp), partial - Apis mellifera
Length = 633
Score = 76.2 bits (179), Expect = 8e-13
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +3
Query: 510 IPPYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGK 689
+P VL+ T++ NIDL I+ + + ++PFQ +G+ +GI++ GRCMIADDMGLGK
Sbjct: 105 LPKIVLQDTSINTIE--NIDLSDIDPKLLENIMPFQREGICYGISKGGRCMIADDMGLGK 162
Query: 690 TYQALAIASYYR 725
T QAL IA Y R
Sbjct: 163 TIQALGIAHYCR 174
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +1
Query: 307 VTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKV 477
+TG Y+IS+ RF + S + PLI KTI SR Y KTK W+F ++DY LM K+
Sbjct: 37 ITGKCYMISDTRFILEISSYFPPLIETLKTISSRSYDMKTKNWSFHLKDYETLMEKI 93
>UniRef50_Q4QAS2 Cluster: DNA helicase, putative; n=3;
Leishmania|Rep: DNA helicase, putative - Leishmania
major
Length = 1029
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
E + ++L PFQ DGVRF + RHGR MIADDMGLGKT QA+A+A +YR
Sbjct: 171 EDCVYRRLKPFQRDGVRFVLERHGRAMIADDMGLGKTVQAIAVAHHYR 218
>UniRef50_Q5FWF4 Cluster: Zinc finger Ran-binding domain-containing
protein 3; n=37; Euteleostomi|Rep: Zinc finger
Ran-binding domain-containing protein 3 - Homo sapiens
(Human)
Length = 1079
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3
Query: 564 IDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
+D +P +R KLLPFQ+DG+ F + R+GRCM+AD+MGLGKT QA+ I +Y+
Sbjct: 26 LDFLP--DRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYK 77
>UniRef50_UPI000049A5F0 Cluster: helicase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: helicase - Entamoeba
histolytica HM-1:IMSS
Length = 981
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +3
Query: 564 IDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
+D+ I + KL PFQ GV FGI +GRC+IAD+MGLGKT QA++IA YY+
Sbjct: 139 VDMSRIGEQLLFKLKPFQVQGVEFGIRHNGRCLIADEMGLGKTLQAISIAQYYK 192
>UniRef50_Q4RQN6 Cluster: Chromosome 2 SCAF15004, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15004, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 671
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +3
Query: 567 DLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
DL ++ + L+PFQ +GV F ++R GR ++ADDMGLGKT QA+ IA+YYR
Sbjct: 195 DLSGVDPALTCSLMPFQREGVNFAVSRQGRLLLADDMGLGKTVQAICIAAYYR 247
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +1
Query: 307 VTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPL 486
V G ++ RF V + A L+ +FKTIPS+ Y TK WNFS+ D+ QLM + + L
Sbjct: 2 VRGKCVPHTDGRFRVEVG-YHAQLVAVFKTIPSKNYDPATKTWNFSLVDHQQLMEEASAL 60
Query: 487 A 489
A
Sbjct: 61 A 61
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +1
Query: 307 VTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPL 486
V G L+S RFEV+ F +I FK +P++ Y K++ W+FS+EDY +LM ++ +
Sbjct: 103 VQGQCILVSPRRFEVDVG-FSVDVIAAFKQMPTKNYDMKSRKWSFSLEDYKRLMDLLSKI 161
Query: 487 A 489
A
Sbjct: 162 A 162
>UniRef50_Q7Q4J3 Cluster: ENSANGP00000006616; n=2; Culicidae|Rep:
ENSANGP00000006616 - Anopheles gambiae str. PEST
Length = 709
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 510 IPPYVLK-ILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLG 686
IP +V++ P I L IE ++ + LL FQ++GV F I + GR +IAD+MGLG
Sbjct: 170 IPKFVMQEFASGPKPKPSRICLNAIEPSLVESLLAFQKEGVAFAIDKGGRALIADEMGLG 229
Query: 687 KTYQALAIASYYR 725
KTYQA+A+A +Y+
Sbjct: 230 KTYQAIAVADFYQ 242
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 PRSDQTTQNVPV-TKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWN 438
P++ ++ PV + VT ++S+ RF V + F +I+IFK IPS+ Y TK W
Sbjct: 86 PKNATPSKVAPVFVRTVTCACSIVSDTRFVVETNGFNEQMIDIFKQIPSKSYEPNTKKWT 145
Query: 439 FSIEDYNQLMSKVAPLAPHVVLG 507
F ++DY+ L ++A L PHVVLG
Sbjct: 146 FEMKDYSLLQERIATLNPHVVLG 168
>UniRef50_Q3V3A8 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630083B12
product:Swi/SNF related matrix associated, actin
dependent regulator of chromatin, subfamily a-like 1,
full insert sequence; n=2; Mus musculus|Rep: 3 days
neonate thymus cDNA, RIKEN full-length enriched library,
clone:A630083B12 product:Swi/SNF related matrix
associated, actin dependent regulator of chromatin,
subfamily a-like 1, full insert sequence - Mus musculus
(Mouse)
Length = 574
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +3
Query: 552 DPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
D DL +++ + L+PFQ +GV F I++ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 378 DVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKTVQAICIAAFYR 435
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P VTG LIS RFEV+ + +I +FK + SR Y KT+ W+F +E++N+L
Sbjct: 283 SAPSLTFVTGKCMLISRVRFEVDIG-YSEAVIGLFKQMESRSYDIKTRKWSFLLEEHNKL 341
Query: 466 MSK 474
+++
Sbjct: 342 IAR 344
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 TPRSDQTTQNV-PVTKVVTG---NVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKT 426
TPR++ N+ T TG + + DRF V + LI +FK++PSR Y T
Sbjct: 182 TPRTEGRPPNILQTTPQNTGFLRGACIKTGDRFRVKIG-YNQELIAVFKSLPSRHYDSFT 240
Query: 427 KLWNFSIEDYNQLMSKVAPLA 489
K W+FS+ DY LM V L+
Sbjct: 241 KTWDFSMSDYRALMKAVERLS 261
>UniRef50_Q8BJL0 Cluster: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like
protein 1; n=22; Euteleostomi|Rep: SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
subfamily A-like protein 1 - Mus musculus (Mouse)
Length = 910
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +3
Query: 552 DPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
D DL +++ + L+PFQ +GV F I++ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 378 DVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKTVQAICIAAFYR 435
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P VTG LIS RFEV+ + +I +FK + SR Y KT+ W+F +E++N+L
Sbjct: 283 SAPSLTFVTGKCMLISRVRFEVDIG-YSEAVIGLFKQMESRSYDIKTRKWSFLLEEHNKL 341
Query: 466 MSK 474
+++
Sbjct: 342 IAR 344
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 TPRSDQTTQNV-PVTKVVTG---NVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKT 426
TPR++ N+ T TG + + DRF V + LI +FK++PSR Y T
Sbjct: 182 TPRTEGRPPNILQTTPQNTGFLRGACIKTGDRFRVKIG-YNQELIAVFKSLPSRHYDSFT 240
Query: 427 KLWNFSIEDYNQLMSKVAPLA 489
K W+FS+ DY LM V L+
Sbjct: 241 KTWDFSMSDYRALMKAVERLS 261
>UniRef50_Q9NZC9 Cluster: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like
protein 1; n=11; Eumetazoa|Rep: SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
subfamily A-like protein 1 - Homo sapiens (Human)
Length = 954
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 546 TVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
T D DL ++ + L+PFQ GV F IA+ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 417 TPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYR 476
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 337 DRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPLAPHVVL 504
DRF+V + A LI +FKT+PS+ Y TK WNFS+ DY+ LM K A P V L
Sbjct: 246 DRFQVLIG-YNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALM-KAAQSLPTVNL 299
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P V G LIS FE + S + LI +FK + SR Y KT+ W+F +E++++L
Sbjct: 324 SAPSLSFVKGRCMLISRAYFEADIS-YSQDLIALFKQMDSRRYDVKTRKWSFLLEEHSKL 382
Query: 466 MSKVAPLAPHVVL 504
++KV L P V L
Sbjct: 383 IAKVRCL-PQVQL 394
>UniRef50_Q4DMB8 Cluster: DNA helicase, putative; n=3; Trypanosoma
cruzi|Rep: DNA helicase, putative - Trypanosoma cruzi
Length = 938
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQAL 704
+++ E+ +D ++ + +L PFQ+ GV F IAR GR MIADDMGLGKT QAL
Sbjct: 168 IQLKHERNIDGNASQPADVDDVVYSQLRPFQKKGVDFIIARGGRGMIADDMGLGKTVQAL 227
Query: 705 AIASYYR 725
A+A +YR
Sbjct: 228 AVAHHYR 234
>UniRef50_A7T6C9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 228
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/61 (45%), Positives = 45/61 (73%)
Frame = +3
Query: 543 QTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYY 722
+++ ++I+L +++ + L+PFQ +GV F I + GR +IADDMGLGKT QA+ +AS+Y
Sbjct: 71 KSLSSEDINLNCVDTKLVSSLMPFQREGVAFCICQDGRAIIADDMGLGKTVQAICVASFY 130
Query: 723 R 725
R
Sbjct: 131 R 131
>UniRef50_Q9FF11 Cluster: Similarity to HepA-related protein Harp;
n=4; core eudicotyledons|Rep: Similarity to HepA-related
protein Harp - Arabidopsis thaliana (Mouse-ear cress)
Length = 1178
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYY 722
LLPFQ DG+RFG+ R GRC IAD+MGLGKT QA+AIA +
Sbjct: 204 LLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCF 243
>UniRef50_Q8SRQ7 Cluster: BELONGS TO THE SNF2/RAD54 HELICASE FAMILY;
n=1; Encephalitozoon cuniculi|Rep: BELONGS TO THE
SNF2/RAD54 HELICASE FAMILY - Encephalitozoon cuniculi
Length = 556
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/72 (50%), Positives = 46/72 (63%)
Frame = +3
Query: 510 IPPYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGK 689
IP VL+I +++ K + PI S LLPFQ +GV + R GR ++ADDMGLGK
Sbjct: 97 IPKGVLRIARKEAGWQKFELIGPIYSM----LLPFQREGVEHALNRGGRMIVADDMGLGK 152
Query: 690 TYQALAIASYYR 725
T QALA+A YYR
Sbjct: 153 TIQALAVAYYYR 164
>UniRef50_Q54TE8 Cluster: TBP-associated factor A; n=2;
Dictyostelium discoideum|Rep: TBP-associated factor A -
Dictyostelium discoideum AX4
Length = 1021
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +3
Query: 585 STIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
S + LLPFQ G+ FGI + GRC+IADDMGLGKT Q ++IA +Y+
Sbjct: 339 SELPSTLLPFQIKGIEFGIEKGGRCLIADDMGLGKTIQGISIAYHYK 385
>UniRef50_Q4N163 Cluster: DNA helicase, putative; n=2;
Theileria|Rep: DNA helicase, putative - Theileria parva
Length = 941
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/41 (63%), Positives = 35/41 (85%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYY 722
+L+PFQ GV FG+A++GR +I D+MGLGKT QALAIA++Y
Sbjct: 367 QLMPFQRQGVYFGLAKNGRVLIGDEMGLGKTLQALAIAAFY 407
>UniRef50_A7APP3 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Babesia bovis|Rep: Helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 879
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
+L PFQ +GV +GI R+GR +I D+MGLGKT QALAI+++YR
Sbjct: 428 QLKPFQREGVNYGIRRNGRVLIGDEMGLGKTLQALAISAFYR 469
>UniRef50_A7NW03 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 624
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 510 IPPYVLKILKEQTVDPKNIDLMP-IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLG 686
I P V + + T P D I S I KLLPFQ DG+RF + GR ++AD+MGLG
Sbjct: 100 IDPLVRRAIDAATAVPDLRDRYDRIPSYIETKLLPFQRDGIRFVLQHGGRVLLADEMGLG 159
Query: 687 KTYQALAIASYYR 725
KT QA+A+ + R
Sbjct: 160 KTLQAIAVTTCVR 172
>UniRef50_Q5RFW6 Cluster: Novel protein similar to vertebrate
SWI\/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1; n=2; Danio
rerio|Rep: Novel protein similar to vertebrate SWI\/SNF
related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 269
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +1
Query: 262 PRSDQTTQNVPVTK---VVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKL 432
P+ + N+P K + G SE+RF V + A LI +FK+IPS+ Y TK+
Sbjct: 113 PKPPEPAANIPAKKPAVYLRGRCVSHSENRFRVEVG-YHADLILVFKSIPSKNYDPATKM 171
Query: 433 WNFSIEDYNQLMSKVAPL 486
WNFS+EDY LM +VA L
Sbjct: 172 WNFSLEDYQMLMEQVAHL 189
>UniRef50_Q385P2 Cluster: SNF2 DNA repair protein, putative; n=1;
Trypanosoma brucei|Rep: SNF2 DNA repair protein,
putative - Trypanosoma brucei
Length = 968
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
+ + +L PFQ+ GV F IAR GR MIADDMGLGKT QA+A A +YR
Sbjct: 173 DDVVYSQLHPFQKRGVGFVIARGGRGMIADDMGLGKTVQAIAFAHHYR 220
>UniRef50_Q69WP6 Cluster: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a-like; n=4;
Magnoliophyta|Rep: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a-like - Oryza
sativa subsp. japonica (Rice)
Length = 747
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIAS 716
I + + KL+PFQ +GVRF + R +IAD+MGLGKT QA+A+AS
Sbjct: 248 IPTDVESKLMPFQREGVRFALQHGARTLIADEMGLGKTLQAIAVAS 293
>UniRef50_A5BA98 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 781
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = +3
Query: 534 LKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQ 698
L + VD + I ++P + LLPFQ DGVRFG+ R GRC+IAD+MGLGKT Q
Sbjct: 185 LSDDKVD-ELIGMLP--KRLLDALLPFQLDGVRFGLRRGGRCLIADEMGLGKTLQ 236
>UniRef50_Q8MNV7 Cluster: Putative SMARCAL1-like protein; n=4;
Caenorhabditis|Rep: Putative SMARCAL1-like protein -
Caenorhabditis elegans
Length = 690
Score = 58.0 bits (134), Expect = 2e-07
Identities = 23/49 (46%), Positives = 38/49 (77%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
++ ++ ++L P+Q++GV F + R GR ++AD+MGLGK+ QAL IA YY+
Sbjct: 192 MDPSLIERLFPYQKEGVIFALERDGRILLADEMGLGKSVQALTIARYYK 240
>UniRef50_A2EQK0 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 904
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Frame = +3
Query: 510 IPPYVLKILKE--QTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGL 683
IP +V+K L T P N+ + + +KLLP Q++ +++ +R+ R +IAD+MGL
Sbjct: 433 IPDFVIKALSNFRPTKIPMNL-FQNLPKRLSEKLLPHQKESIQYVASRNYRALIADEMGL 491
Query: 684 GKTYQALAIASYY 722
GKT QA+AIAS +
Sbjct: 492 GKTLQAVAIASLF 504
>UniRef50_Q5CS57 Cluster: HARP like SWI/SNF ATpase; n=2;
Cryptosporidium|Rep: HARP like SWI/SNF ATpase -
Cryptosporidium parvum Iowa II
Length = 908
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
L PFQ+ G+ G+ +HGR +I D+MGLGKT QAL+I +Y+R
Sbjct: 371 LRPFQKVGILVGLKKHGRVLIGDEMGLGKTLQALSIITYFR 411
>UniRef50_UPI000049831B Cluster: SNF2 family protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: SNF2 family protein -
Entamoeba histolytica HM-1:IMSS
Length = 858
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +3
Query: 507 CIPPYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLG 686
C+ ++ KE+ D + +P S +R + +Q GV+FG+ + GR +I D+MGLG
Sbjct: 315 CVRDLLVLDGKEEQGDLDRYESIP--SKLRNTMFEYQRIGVQFGLRKKGRLLIGDEMGLG 372
Query: 687 KTYQALAIASYY 722
KT QALA+ S Y
Sbjct: 373 KTLQALALVSAY 384
>UniRef50_A0E2Y8 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 767
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
I+ T+ L +Q+D V+ G+ +GR +IADDMG+GKT Q+LA+AS Y+
Sbjct: 125 IDKTLEDTLYEYQKDCVKQGLKFNGRILIADDMGVGKTVQSLALASMYK 173
>UniRef50_Q8IDD0 Cluster: DNA helicase; n=7; Plasmodium|Rep: DNA
helicase - Plasmodium falciparum (isolate 3D7)
Length = 906
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/42 (52%), Positives = 33/42 (78%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
+L FQ +GV FG+ ++GR +I D+MGLGKT QALA+ ++Y+
Sbjct: 352 ELRNFQREGVFFGLKKNGRVLIGDEMGLGKTLQALALMAFYK 393
>UniRef50_Q86AR9 Cluster: Similar to Plasmodium falciparum. DNA
helicase; n=2; Dictyostelium discoideum|Rep: Similar to
Plasmodium falciparum. DNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1400
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 555 PKNIDLMPIESTIRQKLLPFQEDGVRFGIAR-HGRCMIADDMGLGKTYQALAIASYYR 725
P + +P+E + LLPFQ + F + G+C+I D+MGLGKT QALAI+SYYR
Sbjct: 703 PFDCTRIPVE--LFSTLLPFQMKSLSFCTQQLSGKCLIGDEMGLGKTIQALAISSYYR 758
>UniRef50_A0EVZ1 Cluster: Putative uncharacterized protein; n=1;
Arcanobacterium pyogenes|Rep: Putative uncharacterized
protein - Arcanobacterium pyogenes
Length = 237
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 519 YVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIAR---HGRCMIADDMGLGK 689
++ + E DP L ES + KL FQ+D V I + + C+IAD +GLGK
Sbjct: 135 HLFRDFMEDAEDPIRPGLKFEESVVWNKLYDFQKDAVVGAIRKLEKYKGCIIADSVGLGK 194
Query: 690 TYQALAIASYYR 725
TY+ALA+ YYR
Sbjct: 195 TYEALAVIKYYR 206
>UniRef50_Q3VKT7 Cluster: Helicase, C-terminal; n=3; Bacteria|Rep:
Helicase, C-terminal - Pelodictyon phaeoclathratiforme
BU-1
Length = 1108
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGI---ARHGRCMIADDMGLGKTYQALAIASYY 722
+S I +L FQ+DGV+ I +H C+IAD +GLGKTY+ALA+ Y+
Sbjct: 239 DSEIWSELYEFQKDGVKGAINKILKHNGCIIADSVGLGKTYEALAVVKYF 288
>UniRef50_UPI0000E8097B Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 943
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +1
Query: 304 VVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAP 483
+ G EDRF+V + A LI +FK IP+R Y TK W+FS+EDY+ M
Sbjct: 251 ITKGKCVKYGEDRFQVEIG-YNAELIALFKKIPTRSYDPTTKKWDFSLEDYSSFMEAAIH 309
Query: 484 LA 489
L+
Sbjct: 310 LS 311
>UniRef50_A4SAW4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 638
Score = 49.6 bits (113), Expect = 8e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
+ + K+ FQ GV + + R GR +I D+MGLGKT QA A+ + YR
Sbjct: 149 VPKALDAKMFEFQRTGVMYALRRRGRVLIGDEMGLGKTVQACALLACYR 197
>UniRef50_A0L5R1 Cluster: Helicase domain protein; n=8;
Bacteria|Rep: Helicase domain protein - Magnetococcus
sp. (strain MC-1)
Length = 1077
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFG----IARHGRCMIADDMGLGKTYQALAIASYY 722
++ + +KL FQ DGV FG + R G C+IAD +GLGKT++ALA+ Y+
Sbjct: 223 DTVVWRKLYKFQRDGV-FGAIDKLERFGGCIIADSVGLGKTFEALAVIKYF 272
>UniRef50_A7JCU6 Cluster: Putative uncharacterized protein; n=1;
Francisella tularensis subsp. tularensis FSC033|Rep:
Putative uncharacterized protein - Francisella
tularensis subsp. tularensis FSC033
Length = 975
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGI---ARHGRCMIADDMGLGKTYQALAIASYY 722
E+ + KL FQ+DGV I ++ C+IAD +GLGKT++ALA+ YY
Sbjct: 218 ETIVWNKLFDFQKDGVLGAIDKLEKYNGCIIADSVGLGKTFEALAVIKYY 267
>UniRef50_A7HFJ5 Cluster: Non-specific serine/threonine protein
kinase; n=1; Anaeromyxobacter sp. Fw109-5|Rep:
Non-specific serine/threonine protein kinase -
Anaeromyxobacter sp. Fw109-5
Length = 1002
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALA 707
+R KL P+Q +GV F +A GR ++AD+MGLGKT QA+A
Sbjct: 312 LRMKLYPYQVEGVAF-LASRGRALLADEMGLGKTAQAIA 349
>UniRef50_Q23RY4 Cluster: SNF2 family N-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: SNF2
family N-terminal domain containing protein -
Tetrahymena thermophila SB210
Length = 731
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYY 722
+ +I ++L +Q++G+RFG+ R +IAD+MG+GKT QA+ +A Y
Sbjct: 110 LPQSILKQLFNYQKEGIRFGMMNKCRILIADEMGVGKTIQAICLAFAY 157
>UniRef50_Q1NL49 Cluster: SNF2-related:Helicase-like:SWIM
Zn-finger:DEAD/DEAH box helicase-like; n=2; delta
proteobacterium MLMS-1|Rep:
SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box
helicase-like - delta proteobacterium MLMS-1
Length = 1022
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
++ +L P+Q DG F +A GR ++ADDMGLGKT QA++ A + R
Sbjct: 313 VKARLYPYQIDGAAF-LAGTGRALLADDMGLGKTLQAISAAVWLR 356
>UniRef50_A7CQS2 Cluster: Helicase domain protein; n=1; Opitutaceae
bacterium TAV2|Rep: Helicase domain protein -
Opitutaceae bacterium TAV2
Length = 1156
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASYY 722
E+ I L FQ+DG + I + +G C++AD +GLGKTY+ALA+ Y+
Sbjct: 269 ETGIWNSLFAFQKDGAKSAINKLKTYGGCILADSVGLGKTYEALAVIKYF 318
>UniRef50_Q6LFM0 Cluster: DNA helicase, putative; n=1; Plasmodium
falciparum 3D7|Rep: DNA helicase, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1712
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Frame = +3
Query: 522 VLKILKEQTVDPKNIDLMPIEST----IRQKLLPFQEDGVRFGIARHGRCMIADDMGLGK 689
+ KI ++ + KNI L I+ I++ +L +Q + F + GR +IAD+MGLGK
Sbjct: 667 IQKIKRQMNQEIKNICLNEIKKKLPIRIQKVILTYQLQAIYFFFKKRGRILIADEMGLGK 726
Query: 690 TYQALAIASYY 722
T QA++I +Y
Sbjct: 727 TLQAISIFYFY 737
>UniRef50_Q4AEQ9 Cluster: SNF2-related:Helicase, C-terminal:Type III
restriction enzyme, res subunit; n=1; Chlorobium
phaeobacteroides BS1|Rep: SNF2-related:Helicase,
C-terminal:Type III restriction enzyme, res subunit -
Chlorobium phaeobacteroides BS1
Length = 639
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Frame = +3
Query: 507 CIPPYVLKILKEQTVDPKNIDLM-----PIESTIRQKLLPFQEDGVRFGIARHGRCMIAD 671
C+ P V++ + E++ + K +D + P S I KL P+Q++G+ F + R +IAD
Sbjct: 144 CVRPEVIEKI-EKSFETKLLDDLRQMDVPDWSFINAKLYPYQKEGIEFALYRKS-AIIAD 201
Query: 672 DMGLGKTYQALAIA 713
+MGLGKT QA+ A
Sbjct: 202 EMGLGKTLQAMGAA 215
>UniRef50_Q7UGF2 Cluster: Helicase, Snf2 family; n=1; Pirellula
sp.|Rep: Helicase, Snf2 family - Rhodopirellula baltica
Length = 914
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIA 713
+ +LLP+Q DG+ F A GR ++ADDMGLGKT Q + +A
Sbjct: 342 LNAELLPYQLDGIAFA-AGAGRAILADDMGLGKTIQGIGVA 381
>UniRef50_A0ZFG2 Cluster: ATP-dependent helicase HEPA; n=2;
Bacteria|Rep: ATP-dependent helicase HEPA - Nodularia
spumigena CCY 9414
Length = 1496
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASYY 722
I++ I L FQ+DGV+ I + + C+IAD +GLGKT++ALAI Y+
Sbjct: 241 IDTKIWNLLFDFQKDGVKGAINKIMEYNGCIIADSVGLGKTFEALAIIKYF 291
>UniRef50_A3IFT7 Cluster: Helicase, putative; n=1; Bacillus sp.
B14905|Rep: Helicase, putative - Bacillus sp. B14905
Length = 924
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARH----GRCMIADDMGLGKT 692
LK EQ +D K + +PI +++ +L P+Q +G + + G C +ADDMGLGKT
Sbjct: 423 LKAYMEQLLDKKGLPTVPIPESLQTELRPYQIEGFEWLVFMRQQGFGAC-LADDMGLGKT 481
Query: 693 YQALA 707
Q +A
Sbjct: 482 VQMIA 486
>UniRef50_A5K1P4 Cluster: Helicase, putative; n=1; Plasmodium
vivax|Rep: Helicase, putative - Plasmodium vivax
Length = 1522
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
I++ +LP+Q V F ++GR +I D+MGLGKT QA+ I ++R
Sbjct: 630 IQKVILPYQLQSVYFFKEKNGRILIGDEMGLGKTLQAICIFHFFR 674
>UniRef50_A3XZ11 Cluster: DEAD/DEAH box helicase-like; n=1; Vibrio
sp. MED222|Rep: DEAD/DEAH box helicase-like - Vibrio sp.
MED222
Length = 1104
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASYY 722
++ + KL FQ+DGV I + C+IAD +GLGKT++ALA+ YY
Sbjct: 227 DTIVWNKLYKFQKDGVLGAIDKLEHFNGCIIADSVGLGKTFEALAVIKYY 276
>UniRef50_A3J085 Cluster: ATP-dependent helicase HEPA; n=1;
Flavobacteria bacterium BAL38|Rep: ATP-dependent
helicase HEPA - Flavobacteria bacterium BAL38
Length = 1000
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +3
Query: 585 STIRQKLLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASYYR 725
S I L FQ+D V I + +G C+IAD +GLGKT++ALAI YY+
Sbjct: 163 SKIWSLLFNFQKDAVIGAIEKIEKYGGCIIADSVGLGKTFEALAIIKYYQ 212
>UniRef50_A3DCS9 Cluster: Helicase-like protein; n=9; cellular
organisms|Rep: Helicase-like protein - Clostridium
thermocellum (strain ATCC 27405 / DSM 1237)
Length = 1089
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGI---ARHGRCMIADDMGLGKTYQALAIASYY 722
E+ I KL FQ+D V I ++ C+IAD +GLGKT+ ALA+ YY
Sbjct: 241 ETLIWNKLYRFQKDAVMGAIDKLEKYNGCIIADSVGLGKTFTALAVIKYY 290
>UniRef50_Q9SX64 Cluster: F11A17.14 protein; n=1; Arabidopsis
thaliana|Rep: F11A17.14 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 592
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQA 701
I S I KLLPFQ +G+ + GR ++AD+MGLGKT QA
Sbjct: 164 IPSHIEPKLLPFQREGIEY---HGGRVLLADEMGLGKTLQA 201
>UniRef50_A0RYJ5 Cluster: Superfamily II DNA/RNA helicase, SNF2
family; n=3; Thermoprotei|Rep: Superfamily II DNA/RNA
helicase, SNF2 family - Cenarchaeum symbiosum
Length = 574
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +3
Query: 594 RQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
R KLL FQ++G+ F I G ++ D+MGLGKT Q LA S R
Sbjct: 106 RGKLLDFQKEGLDFLIKSSGNALLVDEMGLGKTVQTLAYLSSER 149
>UniRef50_A6PRG3 Cluster: SNF2-related protein; n=1; Victivallis
vadensis ATCC BAA-548|Rep: SNF2-related protein -
Victivallis vadensis ATCC BAA-548
Length = 892
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 528 KILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHGRC-MIADDMGLGKTYQ 698
K +E T P+ + L P+ + L P+Q DGV+F G+ R G +ADDMGLGKT Q
Sbjct: 388 KQFRELTA-PERMQLPPLPEKLSNTLRPYQLDGVKFLWGMTRIGMGPCLADDMGLGKTLQ 446
Query: 699 ALAIASYYR 725
L R
Sbjct: 447 ILTYLELLR 455
>UniRef50_A2SSR6 Cluster: Helicase domain protein; n=3; cellular
organisms|Rep: Helicase domain protein -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 1065
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASYY 722
++ I L FQ+D V I R + C+IAD +GLGKTY+ALA+ Y+
Sbjct: 239 KTKIWNSLYKFQQDAVVTAIQRINQYNGCIIADSVGLGKTYEALAVIKYF 288
>UniRef50_Q4Q417 Cluster: Transcription activator; n=7;
Trypanosomatidae|Rep: Transcription activator -
Leishmania major
Length = 1103
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Frame = +3
Query: 537 KEQTVDPKNIDLMPIEST---IRQKLLPFQEDGVRF--GI-ARHGRCMIADDMGLGKTYQ 698
++ D D+M + T IR KL P+Q +GV + G+ AR ++AD+MGLGKT+Q
Sbjct: 141 RDNEEDSTGFDMMHLTETPSYIRGKLRPYQIEGVNWLLGLFARGVNGILADEMGLGKTFQ 200
Query: 699 ALAIASYYR 725
+A +Y +
Sbjct: 201 TIATIAYLK 209
>UniRef50_Q4DM32 Cluster: DNA excision/repair protein SNF2,
putative; n=2; Trypanosoma cruzi|Rep: DNA
excision/repair protein SNF2, putative - Trypanosoma
cruzi
Length = 773
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 567 DLMPIESTIRQKLLPFQEDGVRFGIARH--GR-CMIADDMGLGKTYQ 698
+ +PI I KL +Q +GV++ RH GR C++AD+MGLGKT Q
Sbjct: 124 ETLPISPEIELKLFDYQREGVQWLYERHRKGRGCLLADEMGLGKTVQ 170
>UniRef50_Q11KY1 Cluster: Helicase-like; n=14; Bacteria|Rep:
Helicase-like - Mesorhizobium sp. (strain BNC1)
Length = 1090
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +3
Query: 582 ESTIRQKLLPFQED---GVRFGIARHGRCMIADDMGLGKTYQALAIASYY 722
+S + KL +Q D G+ + H C++AD +GLGKT+ ALA+ YY
Sbjct: 244 DSLVWNKLFNYQRDAATGIINKLEMHNGCILADSVGLGKTFTALAVIKYY 293
>UniRef50_Q9LJK7 Cluster: DNA repair protein RAD54-like; n=6;
Magnoliophyta|Rep: DNA repair protein RAD54-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 959
Score = 43.2 bits (97), Expect = 0.007
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Frame = +3
Query: 507 CIPPYVLKILKEQTVDP--KNIDLMPIESTIRQKLLPFQEDGVRF---------GIARHG 653
C+PP + ++ Q+ + N+ + + S + + L P Q +GV+F G A
Sbjct: 146 CLPPDIEPLVLWQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANIN 205
Query: 654 RCMIADDMGLGKTYQALAI 710
C++ADDMGLGKT Q++ +
Sbjct: 206 GCILADDMGLGKTLQSITL 224
>UniRef50_Q0SG70 Cluster: Probable helicase; n=1; Rhodococcus sp.
RHA1|Rep: Probable helicase - Rhodococcus sp. (strain
RHA1)
Length = 1070
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = +3
Query: 555 PKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHGRC-MIADDMGLGKTYQALAIASYYR 725
P NI ST+ +L P+Q +G R+ + HG ++ADDMGLGKT QALA+ + R
Sbjct: 594 PTNIGPAEAPSTLDAQLRPYQLEGFRWLAFLWEHGLGGILADDMGLGKTLQALALICHAR 653
>UniRef50_A4BSS8 Cluster: Helicase, SNF2 family protein; n=1;
Nitrococcus mobilis Nb-231|Rep: Helicase, SNF2 family
protein - Nitrococcus mobilis Nb-231
Length = 1171
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDGVR--FGIARHGR-CMIADDMGLGKTYQALAIA 713
K ID +P+ + + +L P+Q+ G + +G G +IADDMGLGKT Q LA A
Sbjct: 688 KTIDDVPLPTALHAELRPYQQCGFQWLYGNTHAGLGSIIADDMGLGKTLQVLATA 742
>UniRef50_A0K1K3 Cluster: SNF2-related protein; n=2;
Arthrobacter|Rep: SNF2-related protein - Arthrobacter
sp. (strain FB24)
Length = 1154
Score = 41.5 bits (93), Expect = 0.021
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGVRF--GIARHGRC-MIADDMGLGKTYQALAI 710
+P+ T+ +L P+Q +G + + RHG ++ADDMGLGKT QALA+
Sbjct: 676 LPLPPTLNAELRPYQLEGFNWLSFLYRHGLGGVLADDMGLGKTVQALAL 724
>UniRef50_A6TUP2 Cluster: Non-specific serine/threonine protein
kinase; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Non-specific serine/threonine protein kinase -
Alkaliphilus metalliredigens QYMF
Length = 883
Score = 41.1 bits (92), Expect = 0.027
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF----GIARHGRCMIADDMGLGKT 692
L+ +KE + P I+ + S+ L +QE G + G C+ ADDMGLGKT
Sbjct: 392 LRSMKESLIHPAGIEKVGTASSFHATLRAYQETGYHWLNQMSQLGFGACL-ADDMGLGKT 450
Query: 693 YQALAIASYYR 725
Q +A Y R
Sbjct: 451 VQMIAFLEYRR 461
>UniRef50_Q4QH75 Cluster: SNF2/RAD54 related DNA helicase, putative;
n=3; Leishmania|Rep: SNF2/RAD54 related DNA helicase,
putative - Leishmania major
Length = 958
Score = 41.1 bits (92), Expect = 0.027
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALA 707
I +R+ + Q +GVR + GR + ADDMG+GKT QALA
Sbjct: 175 IPHLLRRTMKAHQVEGVRTALRWGGRILFADDMGVGKTMQALA 217
>UniRef50_A3LUA0 Cluster: Transcriptional accessory protein involved
in TBP (TATA-binding protein) regulation helicase MOT1;
n=5; Saccharomycetales|Rep: Transcriptional accessory
protein involved in TBP (TATA-binding protein) regulation
helicase MOT1 - Pichia stipitis (Yeast)
Length = 1901
Score = 41.1 bits (92), Expect = 0.027
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVR---FGIARHGRCMIADDMGLGKTYQALAI 710
+Q +DP I + TI+ L +Q++GV F H ++ DDMGLGKT Q + I
Sbjct: 1280 QQMMDPTKIQPFDLPVTIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICI 1339
Query: 711 AS 716
S
Sbjct: 1340 VS 1341
>UniRef50_Q4SEC2 Cluster: Chromosome 3 SCAF14622, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 3 SCAF14622, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 61
Score = 40.7 bits (91), Expect = 0.036
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 552 DPK-NIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDM 677
DP+ + L + +++ L+PFQ GV F ++++GRCMIAD++
Sbjct: 12 DPRWSQQLSGLPHKLQKHLMPFQRKGVAFALSKNGRCMIADEV 54
>UniRef50_Q9K8T9 Cluster: SNF2 helicase; n=1; Bacillus
halodurans|Rep: SNF2 helicase - Bacillus halodurans
Length = 995
Score = 40.7 bits (91), Expect = 0.036
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDGVRFGI----ARHGRCMIADDMGLGKTYQALAIASY 719
+N+ L P ++++ L P+QE+G + I G C+ ADDMGLGKT Q ++ Y
Sbjct: 514 QNVPLRPAPASLQATLRPYQEEGASWLIHLRETGFGGCL-ADDMGLGKTVQTISYILY 570
>UniRef50_Q6LF68 Cluster: Iswi protein homologue; n=7;
Plasmodium|Rep: Iswi protein homologue - Plasmodium
falciparum (isolate 3D7)
Length = 2719
Score = 40.3 bits (90), Expect = 0.047
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDGVRFGIARH--GRCMIADDMGLGKTYQALAIASYYR 725
+ I+ P+ ++ K P QEDGV + + G ++AD+MGLGKT Q L SY +
Sbjct: 325 RKIERRPLVDNVQLK--PHQEDGVEWLLKSFLTGGAILADEMGLGKTIQTLCFLSYLK 380
>UniRef50_A5K279 Cluster: SNF2 family N-terminal domain containing
protein; n=2; Plasmodium|Rep: SNF2 family N-terminal
domain containing protein - Plasmodium vivax
Length = 2946
Score = 40.3 bits (90), Expect = 0.047
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDGVRFGIARH--GRCMIADDMGLGKTYQALAIASYYR 725
+ I+ P+ ++ K P QEDGV + + G ++AD+MGLGKT Q L SY +
Sbjct: 337 RKIERRPLVDNVQLK--PHQEDGVEWLLKSFLTGGAILADEMGLGKTIQTLCFLSYLK 392
>UniRef50_Q7UDX7 Cluster: Swi/snf family helicase_2; n=2;
Planctomycetaceae|Rep: Swi/snf family helicase_2 -
Rhodopirellula baltica
Length = 647
Score = 39.9 bits (89), Expect = 0.063
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +3
Query: 609 PFQEDGVRFGIARHGRCMIADDMGLGKTYQALA 707
P+Q DG+ F R+ C++AD+MGLGKT QA++
Sbjct: 191 PYQLDGIAFLFPRYA-CVLADEMGLGKTMQAIS 222
>UniRef50_Q73RS9 Cluster: Snf2 family protein; n=1; Treponema
denticola|Rep: Snf2 family protein - Treponema denticola
Length = 1194
Score = 39.9 bits (89), Expect = 0.063
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGVRFGIA--RHG-RCMIADDMGLGKTYQALAI 710
+P+ + +L P+Q+ G R+ A + G C++ADDMGLGKT Q +++
Sbjct: 723 VPVPQNLNAELRPYQKQGYRWLYANIKSGFGCLLADDMGLGKTVQIISL 771
>UniRef50_Q1LR46 Cluster: SNF2-related; n=3; Cupriavidus|Rep:
SNF2-related - Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839)
Length = 1025
Score = 39.9 bits (89), Expect = 0.063
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Frame = +3
Query: 576 PIESTIRQKLLPFQEDGVRFGI----ARHGRCMIADDMGLGKTYQALAI 710
P+ T+ +L P+Q +G R+ + A G C+ ADDMGLGKT Q+LA+
Sbjct: 544 PVPPTLVAELRPYQLEGFRWMMSLAEAGFGACL-ADDMGLGKTLQSLAV 591
>UniRef50_A6DU14 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 1021
Score = 39.9 bits (89), Expect = 0.063
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +3
Query: 543 QTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGI-ARHGRC--MIADDMGLGKTYQALAI 710
+ V+ + DL ++ ++ +KL +Q DG+ + I ++ C ++AD+MGLGKT Q L++
Sbjct: 546 EMVNGQTADLSQLDDSLTEKLRDYQVDGLHWLINMKNANCGAILADEMGLGKTIQTLSM 604
>UniRef50_A0QRQ0 Cluster: SNF2 domain protein; n=1; Mycobacterium
smegmatis str. MC2 155|Rep: SNF2 domain protein -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 663
Score = 39.9 bits (89), Expect = 0.063
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = +3
Query: 585 STIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASY 719
S +R +L +Q G ++ +AR R ++ D++GLGKT QAL +A++
Sbjct: 243 SLVRTELRGYQLFGAQYALARR-RVLLCDELGLGKTLQALTVAAH 286
>UniRef50_Q8TG39 Cluster: Putative transcription regulator WdMOT1;
n=1; Exophiala dermatitidis|Rep: Putative transcription
regulator WdMOT1 - Exophiala dermatitidis (Wangiella
dermatitidis)
Length = 1703
Score = 39.9 bits (89), Expect = 0.063
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 543 QTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQALA 707
Q +DPK ++ I I+ +L +Q++GV + HG ++ DDMGLGKT Q L
Sbjct: 1162 QMLDPKKVEPFQIXVAIKAELRSYQQEGVNWLAFLNKYNLHG--VLCDDMGLGKTLQTLC 1219
Query: 708 IAS 716
I +
Sbjct: 1220 IVA 1222
>UniRef50_Q6CUF0 Cluster: Similarities with sgd|S0005717 Saccharomyces
cerevisiae YOR191w RIS1; n=1; Kluyveromyces lactis|Rep:
Similarities with sgd|S0005717 Saccharomyces cerevisiae
YOR191w RIS1 - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 1605
Score = 39.9 bits (89), Expect = 0.063
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +3
Query: 522 VLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRC----MIADDMGLGK 689
+L+ LKE + + DL P E T+ LL Q G+R+ ++ ++ADDMGLGK
Sbjct: 894 LLEGLKEIETEVEGEDLTPNELTVN--LLKHQRQGLRWLVSMEKSSKRGGLLADDMGLGK 951
Query: 690 TYQALAI 710
T Q+LA+
Sbjct: 952 TVQSLAL 958
>UniRef50_A6RZB8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1271
Score = 39.9 bits (89), Expect = 0.063
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 543 QTVDPKNIDLMPIESTIRQKLLPFQEDGVR---FGIARHGRCMIADDMGLGKTYQALAIA 713
Q +DP ++ I I+ +L +Q++GV F H ++ DDMGLGKT Q L I
Sbjct: 1100 QLLDPHKVEEFKIPVAIKAELRSYQQEGVNWLNFLNKYHLHGILCDDMGLGKTLQTLCIV 1159
Query: 714 S 716
+
Sbjct: 1160 A 1160
>UniRef50_A4BN58 Cluster: Putative uncharacterized protein; n=1;
Nitrococcus mobilis Nb-231|Rep: Putative uncharacterized
protein - Nitrococcus mobilis Nb-231
Length = 298
Score = 39.5 bits (88), Expect = 0.083
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
+R L +Q++G+ +A GR ++AD+MGLGKT QA+A R
Sbjct: 184 LRYPLYAYQQEGM-LHLAFKGRAILADEMGLGKTVQAIAACELLR 227
>UniRef50_A1U3V7 Cluster: SNF2-related protein; n=1; Marinobacter
aquaeolei VT8|Rep: SNF2-related protein - Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 1086
Score = 39.5 bits (88), Expect = 0.083
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHGRC-MIADDMGLGKTY 695
L+ L E+ + ++ +P+ S +R +L +Q+DG+ + + G ++ADDMGLGKT
Sbjct: 601 LRNLSEKLTSFQALNHVPVPSEVRAELRHYQQDGLNWLMFLREFGLGGVLADDMGLGKTL 660
Query: 696 QALA 707
Q LA
Sbjct: 661 QTLA 664
>UniRef50_Q9U2S8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 833
Score = 39.5 bits (88), Expect = 0.083
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Frame = +3
Query: 510 IPPYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-------GIARHGR---C 659
IPP++L ++ +D K + +++ + L P Q+ G++F G ++G
Sbjct: 177 IPPFILN--EQDILDRKTTSAVTVDTRFARHLRPHQKSGIQFIFDRLRRGSGKNGGGGGA 234
Query: 660 MIADDMGLGKTYQALA 707
++ADDMGLGK+ Q +A
Sbjct: 235 ILADDMGLGKSLQTMA 250
>UniRef50_Q4QB70 Cluster: Putative uncharacterized protein; n=1;
Leishmania major|Rep: Putative uncharacterized protein -
Leishmania major
Length = 390
Score = 39.5 bits (88), Expect = 0.083
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Frame = +3
Query: 600 KLLPFQEDGVRFGI----ARHGRCMIADDMGLGKTYQALAIASYYR 725
+LLP+Q++GVR+ + H ++ADDMGLGKT Q + S Y+
Sbjct: 195 ELLPYQQEGVRWLLRLTAVEHMGGILADDMGLGKTAQTVVYLSCYK 240
>UniRef50_UPI0000E4713B Cluster: PREDICTED: similar to RAD26L
hypothetical protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RAD26L
hypothetical protein, partial - Strongylocentrotus
purpuratus
Length = 827
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +3
Query: 555 PKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGR----CMIADDMGLGKTYQALA 707
P L+ + TI + L +Q +GVRF + RH + ++ DDMGLGKT Q +A
Sbjct: 580 PGRRPLIQVPGTINRYLRDYQREGVRF-LYRHYKEDEGAILGDDMGLGKTVQVIA 633
>UniRef50_Q8A2F2 Cluster: Snf2 family helicase; n=3;
Bacteroides|Rep: Snf2 family helicase - Bacteroides
thetaiotaomicron
Length = 1027
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDG----VRFGIARHGRCMIADDMGLGKTYQALAIASY 719
+ I +P+ + KL P+Q+ G V+ G C+ ADDMGLGKT Q L + Y
Sbjct: 473 REIRNVPVPQGLNAKLRPYQQKGFSWMVQLNKQGFGGCL-ADDMGLGKTLQTLTLLQY 529
>UniRef50_Q5YT78 Cluster: Putative helicase; n=1; Nocardia
farcinica|Rep: Putative helicase - Nocardia farcinica
Length = 575
Score = 39.1 bits (87), Expect = 0.11
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +3
Query: 513 PPYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF---GIARHGRCMIADDMGL 683
P L++L+E + + +L +T+R L +Q GV + +A HG ++AD+MGL
Sbjct: 96 PERALRVLRE--TEARTAELA---TTLRADLRTYQARGVSWLHETVAAHGGAVLADEMGL 150
Query: 684 GKTYQAL 704
GKT QA+
Sbjct: 151 GKTVQAI 157
>UniRef50_Q31PW5 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus elongatus|Rep: DEAD/DEAH box helicase-like
- Synechococcus sp. (strain PCC 7942) (Anacystis
nidulans R2)
Length = 1019
Score = 39.1 bits (87), Expect = 0.11
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGV-------RFGIARHGRCMIADDMGLGKTYQALA 707
+P T + +L P+QE GV RFGI G C+ ADDMGLGKT Q LA
Sbjct: 521 LPAPPTFQGELRPYQERGVGWLSFLQRFGI---GACL-ADDMGLGKTIQLLA 568
>UniRef50_A3JHJ5 Cluster: Superfamily II DNA/RNA helicase; n=1;
Marinobacter sp. ELB17|Rep: Superfamily II DNA/RNA
helicase - Marinobacter sp. ELB17
Length = 877
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +3
Query: 606 LPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIAS 716
LP+Q+ G+ + + R G +IAD+ GLGKT QA+ +++
Sbjct: 305 LPYQKAGIAYAV-RKGNALIADEPGLGKTIQAVGVSN 340
>UniRef50_Q9V0B0 Cluster: Putative DEAH ATP-dependent helicase; n=1;
Pyrococcus abyssi|Rep: Putative DEAH ATP-dependent
helicase - Pyrococcus abyssi
Length = 973
Score = 39.1 bits (87), Expect = 0.11
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 531 ILKEQTVDPKNIDLMPIESTIRQKLLPFQ---EDGVRFGIARHGRCMIADDMGLGKTYQA 701
+L+E + N+ M + R+K+ PF + I R R IAD++GLGKT QA
Sbjct: 7 LLRELVLHSPNLFYMSLAWPGRKKIEPFLHQLQPLYHAMIQRPVRMFIADEIGLGKTIQA 66
Query: 702 LAIASY 719
LAIA Y
Sbjct: 67 LAIARY 72
>UniRef50_UPI0000E45D81 Cluster: PREDICTED: similar to
TBP-associated factor 172, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
TBP-associated factor 172, partial - Strongylocentrotus
purpuratus
Length = 565
Score = 38.7 bits (86), Expect = 0.14
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D ID + I+ +L +Q+DGV + HG ++ DDMGLGKT Q++
Sbjct: 417 EQLLDGSKIDPFKVPVPIKAELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQSI 474
Query: 705 AI 710
I
Sbjct: 475 CI 476
>UniRef50_Q6MEA0 Cluster: Putative rapA, a bacterial member of the
swi/snf helicase family; n=1; Candidatus Protochlamydia
amoebophila UWE25|Rep: Putative rapA, a bacterial member
of the swi/snf helicase family - Protochlamydia
amoebophila (strain UWE25)
Length = 893
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +3
Query: 516 PYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVR-----FGIARHGRCMIADDMG 680
P L I K++ + K ++ + L P+Q++G+ F HG ++AD+MG
Sbjct: 408 PSTLSIFKQKWENFKGVETALPAPSFEGHLRPYQQEGLNWLSFLFNYGFHG--ILADEMG 465
Query: 681 LGKTYQALAIASYY 722
LGKT Q LA S +
Sbjct: 466 LGKTVQVLAFISRF 479
>UniRef50_Q93HV4 Cluster: Putative uncharacterized protein; n=1;
Streptomyces griseus|Rep: Putative uncharacterized
protein - Streptomyces griseus
Length = 724
Score = 38.7 bits (86), Expect = 0.14
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASY 719
++ +R L +Q G RF +A+ R +I D+MGLGKT QA+A ++
Sbjct: 314 DTCLRVSLRGYQAFGARFALAQK-RVVIGDEMGLGKTVQAIAALAH 358
>UniRef50_Q7Z2C2 Cluster: Snf2-related chromatin remodeling factor
SRCAP; n=3; Eukaryota|Rep: Snf2-related chromatin
remodeling factor SRCAP - Toxoplasma gondii
Length = 2924
Score = 38.7 bits (86), Expect = 0.14
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAI 710
E + P+ + P + +R L +Q +GV++ A H + + +AD+MGLGKT Q + +
Sbjct: 1230 EPSPQPRYLSSNPAPALVRATLRTYQSEGVQWLFALHDKGLNGILADEMGLGKTLQTIVL 1289
>UniRef50_Q54RP8 Cluster: SNF2-related domain-containing protein;
n=2; Dictyostelium discoideum AX4|Rep: SNF2-related
domain-containing protein - Dictyostelium discoideum AX4
Length = 931
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 9/53 (16%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRF---------GIARHGRCMIADDMGLGKTYQALAI 710
++ + QKL P Q +GV+F G + C++ADDMGLGK+ QA+ I
Sbjct: 275 VDPILSQKLRPHQREGVQFMFDCLLGFRGGFKGNGCILADDMGLGKSIQAITI 327
>UniRef50_Q4Q7H3 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1235
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 603 LLPFQEDGVRFGI---ARHGRCMIADDMGLGKTYQALAIASYYR 725
LLP Q DG+RF A H ++AD+MG+GKT Q LA Y +
Sbjct: 268 LLPHQMDGLRFLASLDANHINGILADEMGVGKTIQTLAFLLYLK 311
>UniRef50_Q229Q0 Cluster: SNF2 family N-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: SNF2
family N-terminal domain containing protein -
Tetrahymena thermophila SB210
Length = 941
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
LL +Q+D ++ I R+G ++AD+ LGK+ AL +A YR
Sbjct: 74 LLQYQQDAIKLIIQRNGNTILADEQFLGKSLIALKVAQEYR 114
>UniRef50_Q6BZT4 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=2;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome F
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1869
Score = 38.7 bits (86), Expect = 0.14
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
+Q +D I P+ +I+ L +Q+DGV + HG ++ DDMGLGKT Q +
Sbjct: 1232 QQMLDVSKIKPFPLPVSIKATLRKYQQDGVNWLAFLNKYQLHG--ILCDDMGLGKTLQTI 1289
Query: 705 AIAS 716
I S
Sbjct: 1290 CIVS 1293
>UniRef50_Q5KI59 Cluster: Pol II transcription elongation factor,
putative; n=2; Filobasidiella neoformans|Rep: Pol II
transcription elongation factor, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 902
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHGR---CMIADDMGLGKTYQALAIASY 719
L+PFQ +G ++ + ++ + C++ADDMGLGKT Q ++ Y
Sbjct: 617 LMPFQMEGFQWLLYKYFKRESCILADDMGLGKTVQIASVLGY 658
>UniRef50_Q6BKC2 Cluster: Helicase SWR1; n=2;
Saccharomycetaceae|Rep: Helicase SWR1 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 1616
Score = 38.7 bits (86), Expect = 0.14
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHG-RCMIADDMGLGKTY 695
L +L+E+ K D+ P+ +R L P+Q+ G+ + + +G ++AD+MGLGKT
Sbjct: 756 LDVLEEEVNGSKVRDV-PLPPLLRGTLRPYQKQGLNWLASLYNNGTNGILADEMGLGKTI 814
Query: 696 QALAIASY 719
Q +++ +Y
Sbjct: 815 QTISLLAY 822
>UniRef50_Q59U81 Cluster: Helicase SWR1; n=3; Saccharomycetales|Rep:
Helicase SWR1 - Candida albicans (Yeast)
Length = 1641
Score = 38.7 bits (86), Expect = 0.14
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +3
Query: 543 QTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRC---MIADDMGLGKTYQALAIA 713
+ V+ + +PI S +R L P+Q+ G+ + + + ++AD+MGLGKT Q +++
Sbjct: 803 EIVNGSKVKDVPIPSLLRGTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLL 862
Query: 714 SY 719
+Y
Sbjct: 863 AY 864
>UniRef50_Q1VZW1 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 1216
Score = 38.3 bits (85), Expect = 0.19
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARH----GRCMIADDMGLGKTYQALAIASYYR 725
KL P+Q++G+ + + H G C+ ADDMGLGKT Q++A + +
Sbjct: 754 KLRPYQQEGLNWLVFLHENQLGGCL-ADDMGLGKTLQSIAFLQFLK 798
>UniRef50_Q9ZW97 Cluster: F11M21.32 protein; n=8; Magnoliophyta|Rep:
F11M21.32 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 874
Score = 38.3 bits (85), Expect = 0.19
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Frame = +3
Query: 555 PKNIDLMPIESTIRQKLLPFQEDGVRFGIA----RHGRCMIADDMGLGKTYQALA-IASY 719
PK++ + ++I +LL Q +GV+F HG ++ DDMGLGKT Q +A +A+
Sbjct: 135 PKSLTFAHVPASINCRLLEHQREGVKFMYNLYKNNHGG-ILGDDMGLGKTIQTIAFLAAV 193
Query: 720 Y 722
Y
Sbjct: 194 Y 194
>UniRef50_Q5T890 Cluster: Chromosome 9 open reading frame 102; n=40;
Euteleostomi|Rep: Chromosome 9 open reading frame 102 -
Homo sapiens (Human)
Length = 712
Score = 38.3 bits (85), Expect = 0.19
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARH---GRCMIADDMGLGKTYQALA 707
I TI + L +Q +G RF + G C++ DDMGLGKT Q ++
Sbjct: 126 IPYTINRYLRDYQREGTRFLYGHYIHGGGCILGDDMGLGKTVQVIS 171
>UniRef50_Q4PFZ7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1124
Score = 38.3 bits (85), Expect = 0.19
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRF---GIARHGRCMIADDMGLGKTYQALAIAS 716
+ ++I + L +Q DGVRF A+ ++ DDMGLGKT Q +A S
Sbjct: 280 VPASINRFLRSYQRDGVRFLYRSYAQGRGALLGDDMGLGKTIQVIAFLS 328
>UniRef50_Q6FK48 Cluster: Helicase SWR1; n=1; Candida glabrata|Rep:
Helicase SWR1 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 1450
Score = 38.3 bits (85), Expect = 0.19
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRC---MIADDMGLGKTYQALAI 710
+ T DP + +P S +R L +Q+ G+ + + + ++AD+MGLGKT Q +++
Sbjct: 607 DTTNDPLAVQDVPTPSLLRGTLRTYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISL 666
Query: 711 ASY 719
SY
Sbjct: 667 LSY 669
>UniRef50_UPI00004985DE Cluster: SNF2 family protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: SNF2 family protein -
Entamoeba histolytica HM-1:IMSS
Length = 1527
Score = 37.9 bits (84), Expect = 0.25
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAI 710
I KL P+Q DG+ + + H C+ + DDMGLGKT Q L +
Sbjct: 979 INGKLRPYQLDGISWLLFLHKYCINGILCDDMGLGKTLQTLCL 1021
>UniRef50_Q6MMG5 Cluster: Putative helicase/SNF2 family domain
protein; n=1; Bdellovibrio bacteriovorus|Rep: Putative
helicase/SNF2 family domain protein - Bdellovibrio
bacteriovorus
Length = 1330
Score = 37.9 bits (84), Expect = 0.25
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +3
Query: 567 DLMPIESTIRQKLLPFQEDGVRFGI----ARHGRCMIADDMGLGKTYQALAIASYYR 725
DL+ + +++ +L +Q +GV++ + R G ++ADDMGLGKT QAL+ R
Sbjct: 849 DLVKLPGSVKAELKTYQHEGVQWLLDLFTLRMG-ALLADDMGLGKTLQALSFLDLLR 904
>UniRef50_Q9M378 Cluster: TATA box binding protein (TBP) associated
factor (TAF)-like protein; n=4; core eudicotyledons|Rep:
TATA box binding protein (TBP) associated factor
(TAF)-like protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 2049
Score = 37.9 bits (84), Expect = 0.25
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-GIARHGRC--MIADDMGLGKTYQALAI 710
EQ +D +ID + + ++ +L +Q++G+ + G + + ++ DDMGLGKT QA AI
Sbjct: 1423 EQLLDNSHIDDYKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAI 1482
Query: 711 AS 716
+
Sbjct: 1483 VA 1484
>UniRef50_Q00XM1 Cluster: SMCA5_HUMAN SWI/SNF related matrix
associated act; n=5; Eukaryota|Rep: SMCA5_HUMAN SWI/SNF
related matrix associated act - Ostreococcus tauri
Length = 1914
Score = 37.9 bits (84), Expect = 0.25
Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Frame = +3
Query: 570 LMPIEST---IRQKLLPFQEDGVRFGIARHGR---CMIADDMGLGKTYQALA 707
LMP+++ I+ L +Q +G+R+ + + + C++AD+MGLGKT Q+++
Sbjct: 192 LMPVDNQPAMIKAVLREYQLEGLRYNVGMYDQGCSCILADEMGLGKTLQSIS 243
>UniRef50_A4RVY4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 898
Score = 37.9 bits (84), Expect = 0.25
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRF--GIARHGRC-MIADDMGLGKTYQALAIAS 716
+++ + +L Q DGVR+ G+ GR ++ADDMGLGKT QA A +
Sbjct: 79 LDAALASRLYDHQRDGVRWMWGLHLAGRGGILADDMGLGKTLQACAFVA 127
>UniRef50_Q54M42 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 2005
Score = 37.9 bits (84), Expect = 0.25
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D ++ P+ I +L +Q+DGV + HG ++ DDMGLGKT Q +
Sbjct: 1356 EQLLDGSKVENYPLPIRINTELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQTI 1413
Query: 705 AI 710
I
Sbjct: 1414 CI 1415
>UniRef50_Q4U971 Cluster: SWI/SNF-related chromatin remodelling
factor (ISWI homologue), putative; n=1; Theileria
annulata|Rep: SWI/SNF-related chromatin remodelling
factor (ISWI homologue), putative - Theileria annulata
Length = 1972
Score = 37.9 bits (84), Expect = 0.25
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARH--GRCMIADDMGLGKTYQALAIASYYR 725
L P QEDGV + + G ++AD+MGLGKT Q L SY +
Sbjct: 344 LKPHQEDGVDWLLKSFLTGGAILADEMGLGKTIQTLCFLSYLK 386
>UniRef50_Q4N1W3 Cluster: DNA-dependent helicase, putative; n=1;
Theileria parva|Rep: DNA-dependent helicase, putative -
Theileria parva
Length = 2026
Score = 37.9 bits (84), Expect = 0.25
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARH--GRCMIADDMGLGKTYQALAIASYYR 725
L P QEDGV + + G ++AD+MGLGKT Q L SY +
Sbjct: 340 LKPHQEDGVDWLLKSFLTGGAILADEMGLGKTIQTLCFLSYLK 382
>UniRef50_Q6BSL5 Cluster: Similar to CA0917|CaRAD16 Candida albicans
CaRAD16; n=1; Debaryomyces hansenii|Rep: Similar to
CA0917|CaRAD16 Candida albicans CaRAD16 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 456
Score = 37.9 bits (84), Expect = 0.25
Identities = 18/41 (43%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIAR----HGRCMIADDMGLGKTYQALAI 710
KLLPFQ++G+ + I + +G ++AD+MG+GKT Q +A+
Sbjct: 215 KLLPFQQEGLNWLIKQEDGEYGGGILADEMGMGKTIQMIAL 255
>UniRef50_UPI0000499C2F Cluster: RAD54 DNA repair protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: RAD54 DNA repair
protein - Entamoeba histolytica HM-1:IMSS
Length = 710
Score = 37.5 bits (83), Expect = 0.33
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Frame = +3
Query: 549 VDPKNIDLMPIESTIRQKLLPFQEDGVRFG---IARHGRC--MIADDMGLGKTYQALAI 710
+D K + I+ I + L P Q +GV+F I R G C ++AD+MGLGKT Q + +
Sbjct: 123 IDDKKEPAILIDPYIGKFLRPHQIEGVKFMYHCIMRGGECGCILADEMGLGKTLQTITL 181
>UniRef50_Q7UA61 Cluster: Possible helicase; n=13;
Cyanobacteria|Rep: Possible helicase - Synechococcus sp.
(strain WH8102)
Length = 539
Score = 37.5 bits (83), Expect = 0.33
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 606 LPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIA 713
LP Q G R+ +AR G ++AD+MGLGKT AL A
Sbjct: 114 LPHQRSGARWLLARRG-AVLADEMGLGKTLTALLAA 148
>UniRef50_Q2LY67 Cluster: Swf/snf family helicase; n=1; Syntrophus
aciditrophicus SB|Rep: Swf/snf family helicase -
Syntrophus aciditrophicus (strain SB)
Length = 1407
Score = 37.5 bits (83), Expect = 0.33
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +3
Query: 558 KNIDLMPI-ESTIRQKLLPFQEDG----VRFGIARHGRCMIADDMGLGKTYQALAI 710
K + L P+ ST++ +L +Q G +R G C+ ADDMGLGKT QALA+
Sbjct: 936 KGMTLQPVVPSTLQAELRDYQVAGYEWMIRLSSWGAGACL-ADDMGLGKTLQALAV 990
>UniRef50_Q1VHH4 Cluster: Lycopene cyclase; n=2; Psychroflexus
torquis ATCC 700755|Rep: Lycopene cyclase -
Psychroflexus torquis ATCC 700755
Length = 235
Score = 37.5 bits (83), Expect = 0.33
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = -1
Query: 344 NLSSDIKYTFPVTTLVTGTFWVVWSDLGVK--MEGFSANYPLKDKFFYLIY*VD*WTCYL 171
N +S+ +Y FP + L+TGTF+++W + K + GFS + FYL ++ W ++
Sbjct: 25 NYASNFRYLFP-SLLITGTFFIIWDIIFTKNGVWGFSEVHTSNINLFYLP--LEEWLFFI 81
Query: 170 FYFVSCV 150
SC+
Sbjct: 82 IIPFSCL 88
>UniRef50_A4JV79 Cluster: Helicase domain protein; n=1; Burkholderia
vietnamiensis G4|Rep: Helicase domain protein -
Burkholderia vietnamiensis (strain G4 / LMG 22486)
(Burkholderiacepacia (strain R1808))
Length = 682
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIA 713
+L FQ++GV F + R+ ++ADDMGLGK+ QA+ A
Sbjct: 265 QLYDFQKEGV-FHLVRNTSALLADDMGLGKSRQAVCAA 301
>UniRef50_Q4P6N3 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Ustilago maydis (Smut fungus)
Length = 2115
Score = 37.5 bits (83), Expect = 0.33
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +3
Query: 543 QTVDPKNIDLMPIESTIRQKLLPFQEDGVRFG--IARHG-RCMIADDMGLGKTYQALAIA 713
Q +D ++ I I KL +Q+DGV + +A++ ++ DDMGLGKT Q++ I
Sbjct: 1498 QLLDGSKVEPYQIPVKINAKLRKYQQDGVNWMAFLAKYQLHGILCDDMGLGKTLQSICIL 1557
Query: 714 S 716
S
Sbjct: 1558 S 1558
>UniRef50_A1D445 Cluster: TBP associated factor (Mot1), putative;
n=15; cellular organisms|Rep: TBP associated factor
(Mot1), putative - Neosartorya fischeri (strain ATCC 1020
/ DSM 3700 / NRRL 181)(Aspergillus fischerianus (strain
ATCC 1020 / DSM 3700 / NRRL 181))
Length = 1920
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 543 QTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHG-RCMIADDMGLGKTYQALAIA 713
Q +D + ++ I I+ +L P+Q++GV + + R+ ++ DDMGLGKT Q + I
Sbjct: 1313 QMLDFRKVEEFKIPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIV 1372
Query: 714 S 716
+
Sbjct: 1373 A 1373
>UniRef50_P38144 Cluster: ISWI chromatin-remodeling complex ATPase
ISW1; n=27; Dikarya|Rep: ISWI chromatin-remodeling
complex ATPase ISW1 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 1129
Score = 37.5 bits (83), Expect = 0.33
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Frame = +3
Query: 528 KILKEQ-TVDPKNIDLMPIEST--IRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGK 689
++LKE+ + D ++I+ ES + +L P+Q GV + ++ H + +AD+MGLGK
Sbjct: 168 ELLKEEDSDDDESIEFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGK 227
Query: 690 TYQALAIASYYR 725
T Q ++ Y R
Sbjct: 228 TLQTISFLGYLR 239
>UniRef50_O14981 Cluster: TATA-binding protein-associated factor 172
(EC 3.6.1.-) (ATP-dependent helicase BTAF1)
(TBP-associated factor 172) (TAF-172) (TAF(II)170); n=32;
Eumetazoa|Rep: TATA-binding protein-associated factor 172
(EC 3.6.1.-) (ATP-dependent helicase BTAF1)
(TBP-associated factor 172) (TAF-172) (TAF(II)170) - Homo
sapiens (Human)
Length = 1849
Score = 37.5 bits (83), Expect = 0.33
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D K ++ I I +L +Q+DGV + HG ++ DDMGLGKT Q++
Sbjct: 1245 EQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQSI 1302
Query: 705 AI 710
I
Sbjct: 1303 CI 1304
>UniRef50_A2RUZ9 Cluster: LOC553504 protein; n=7; Danio rerio|Rep:
LOC553504 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1105
Score = 37.1 bits (82), Expect = 0.44
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 588 TIRQKLLPFQEDGVRF---GIARHGRCMIADDMGLGKTYQAL 704
TI + L +Q +G++F A+ C++ DDMGLGKT Q +
Sbjct: 53 TINRYLRDYQREGIKFIYQNYAKSRGCILGDDMGLGKTVQVI 94
>UniRef50_Q9X085 Cluster: Putative uncharacterized protein; n=1;
Thermotoga maritima|Rep: Putative uncharacterized
protein - Thermotoga maritima
Length = 967
Score = 37.1 bits (82), Expect = 0.44
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 639 IARHGRCMIADDMGLGKTYQALAIASY 719
++R R +IAD++GLGKT QALAIA Y
Sbjct: 2 LSRPVRILIADEIGLGKTIQALAIARY 28
>UniRef50_Q9ADE3 Cluster: Putative bifunctional protein; n=2;
Streptomyces|Rep: Putative bifunctional protein -
Streptomyces coelicolor
Length = 800
Score = 37.1 bits (82), Expect = 0.44
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +3
Query: 594 RQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASY 719
R L +Q G RF +A+ + ++ D+MGLGKT QA+A+ ++
Sbjct: 329 RVSLRGYQAFGARFALAQR-KVILGDEMGLGKTIQAIAVLAH 369
>UniRef50_Q41HD1 Cluster: SNF2-related:Helicase, C-terminal:SWIM
Zn-finger; n=1; Exiguobacterium sibiricum 255-15|Rep:
SNF2-related:Helicase, C-terminal:SWIM Zn-finger -
Exiguobacterium sibiricum 255-15
Length = 876
Score = 37.1 bits (82), Expect = 0.44
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = +3
Query: 519 YVLKILKEQTVDPKNID--LMPIESTIRQKLLPFQEDGVRF--GIARH-GRCMIADDMGL 683
+V K L E+ ++ KN + + + L P+Q G++F +A H G ++AD+MGL
Sbjct: 394 HVHKQLTERWLELKNGTGVYLNFPEVLDRHLYPYQRAGIQFMANLAGHDGHGILADEMGL 453
Query: 684 GKTYQAL 704
GKT QA+
Sbjct: 454 GKTIQAI 460
>UniRef50_A5MR54 Cluster: Snf2 family protein, putative; n=1;
Streptococcus pneumoniae SP19-BS75|Rep: Snf2 family
protein, putative - Streptococcus pneumoniae SP19-BS75
Length = 1048
Score = 37.1 bits (82), Expect = 0.44
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 555 PKNIDLMPIESTIRQKLLPFQEDGVRF-GIARHGRC--MIADDMGLGKTYQALAI 710
P+ D+ P E ++ KL +Q++GV++ + H ++ADDMGLGKT Q + +
Sbjct: 589 PEEFDIKPYE--VKAKLRSYQKEGVKWLSMLDHYHFGGILADDMGLGKTLQTITL 641
>UniRef50_A5FJ22 Cluster: Non-specific serine/threonine protein
kinase; n=1; Flavobacterium johnsoniae UW101|Rep:
Non-specific serine/threonine protein kinase -
Flavobacterium johnsoniae UW101
Length = 966
Score = 37.1 bits (82), Expect = 0.44
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRFGIARH----GRCMIADDMGLGKTYQALAI 710
++ L P+Q DGV++ + G C+ ADDMGLGKT Q LA+
Sbjct: 486 LKATLRPYQIDGVKWLLGHFNSNLGACL-ADDMGLGKTLQTLAV 528
>UniRef50_A4IT85 Cluster: Helicase, putative; n=1; Geobacillus
thermodenitrificans NG80-2|Rep: Helicase, putative -
Geobacillus thermodenitrificans (strain NG80-2)
Length = 926
Score = 37.1 bits (82), Expect = 0.44
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Frame = +3
Query: 561 NIDLMP---IESTIRQKLLPFQEDGV-------RFGIARHGRCMIADDMGLGKTYQALAI 710
NID +P + + L P+Q+ GV RFG G C+ ADDMGLGKT Q LA
Sbjct: 434 NIDELPTAVVPPSFHGTLRPYQQRGVDWLAFLRRFGF---GACL-ADDMGLGKTVQLLAY 489
Query: 711 ASYYR 725
+Y +
Sbjct: 490 LAYVK 494
>UniRef50_A0KM74 Cluster: SNF2 family helicase; n=2; Aeromonas|Rep:
SNF2 family helicase - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 1280
Score = 37.1 bits (82), Expect = 0.44
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Frame = +3
Query: 603 LLPFQEDGVRF--GIARHG-RCMIADDMGLGKTYQALAI 710
L +Q++GVR+ +A HG +ADDMGLGKT QAL +
Sbjct: 831 LRDYQKEGVRWLATLAHHGFGACLADDMGLGKTLQALIV 869
>UniRef50_Q8GZN6 Cluster: SNF2P; n=9; Magnoliophyta|Rep: SNF2P -
Hordeum vulgare (Barley)
Length = 882
Score = 37.1 bits (82), Expect = 0.44
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHG---RCMIADDMGLGKTYQALAIASYYR 725
L P Q DGV + I R+ ++ D+MGLGKT QA+++ SY +
Sbjct: 40 LKPHQLDGVHWLIRRYHLGVNVLLGDEMGLGKTLQAISLLSYLK 83
>UniRef50_Q55C32 Cluster: SNF2-related domain-containing protein; n=9;
Eukaryota|Rep: SNF2-related domain-containing protein -
Dictyostelium discoideum AX4
Length = 3247
Score = 37.1 bits (82), Expect = 0.44
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
KL P+Q G+++ ++ + + +AD+MGLGKT Q +A+ SY
Sbjct: 1710 KLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSY 1752
>UniRef50_Q25342 Cluster: DNA excision/repair protein SNF2,
putative; n=3; Leishmania|Rep: DNA excision/repair
protein SNF2, putative - Leishmania major strain
Friedlin
Length = 925
Score = 37.1 bits (82), Expect = 0.44
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHGR---CMIADDMGLGKTYQALA 707
+L P Q GV++ +RH + C++AD+MGLGKT Q A
Sbjct: 120 RLYPHQRAGVQWLYSRHCKSRACLLADEMGLGKTVQVAA 158
>UniRef50_Q8SUC5 Cluster: Similarity to THE ATPase COMPONENT OF THE
TWO-SUBUNIT CHROMATIN REMODELING FACTOR; n=1;
Encephalitozoon cuniculi|Rep: Similarity to THE ATPase
COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR
- Encephalitozoon cuniculi
Length = 823
Score = 37.1 bits (82), Expect = 0.44
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGR---CMIADDMGLGKTYQALAI 710
E+ V+P P + +L +Q +G+ + I H C++AD+MGLGKT Q +A
Sbjct: 34 EEPVEPYTFISSP--RFVLYELRDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAF 91
Query: 711 ASYYR 725
Y R
Sbjct: 92 LGYIR 96
>UniRef50_Q2FM80 Cluster: SNF2-related; n=2; Methanospirillum
hungatei JF-1|Rep: SNF2-related - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 1048
Score = 37.1 bits (82), Expect = 0.44
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGVRF--GIARHG-RCMIADDMGLGKTYQALAIASYYR 725
+P+ + L P+QE+G F R G +ADDMGLGKT Q LA Y +
Sbjct: 561 VPVPKKFKGILRPYQEEGFSFLCQCTRRGFGACLADDMGLGKTPQTLAWLVYLK 614
>UniRef50_Q05471 Cluster: Helicase SWR1; n=3;
Saccharomycetaceae|Rep: Helicase SWR1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1514
Score = 37.1 bits (82), Expect = 0.44
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGVRFGIA---RHGRCMIADDMGLGKTYQALAIASY 719
+P+ S +R L +Q+ G+ + + H ++AD+MGLGKT Q +++ +Y
Sbjct: 686 VPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAY 737
>UniRef50_P32333 Cluster: TATA-binding protein-associated factor MOT1;
n=6; Fungi/Metazoa group|Rep: TATA-binding
protein-associated factor MOT1 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 1867
Score = 37.1 bits (82), Expect = 0.44
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVR---FGIARHGRCMIADDMGLGKTYQALAI 710
+Q +DP + I+ L +Q+DGV F H ++ DDMGLGKT Q + I
Sbjct: 1251 QQMMDPSKAKPFKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICI 1310
>UniRef50_Q8NQ17 Cluster: Superfamily II DNA/RNA helicases, SNF2
family; n=3; Corynebacterium|Rep: Superfamily II DNA/RNA
helicases, SNF2 family - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 892
Score = 36.7 bits (81), Expect = 0.58
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 612 FQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASY 719
+Q G RF I + + ++ DDMGLGKT QAL+ A++
Sbjct: 456 YQSFGARFAIIQK-KTLLGDDMGLGKTVQALSAAAH 490
>UniRef50_A7HHN9 Cluster: Non-specific serine/threonine protein
kinase; n=3; Proteobacteria|Rep: Non-specific
serine/threonine protein kinase - Anaeromyxobacter sp.
Fw109-5
Length = 931
Score = 36.7 bits (81), Expect = 0.58
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Frame = +3
Query: 603 LLPFQEDGVRF--GIARHGRC-MIADDMGLGKTYQALAI 710
L P+Q DGVR+ ++R G +ADDMGLGKT Q LA+
Sbjct: 436 LRPYQRDGVRWLWTLSRLGLGGCLADDMGLGKTVQVLAL 474
>UniRef50_A5GPG1 Cluster: Superfamily II DNA/RNA helicases, SNF2
family; n=16; Cyanobacteria|Rep: Superfamily II DNA/RNA
helicases, SNF2 family - Synechococcus sp. (strain
WH7803)
Length = 1070
Score = 36.7 bits (81), Expect = 0.58
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARH----GRCMIADDMGLGKTYQALA 707
EQ K D +P +L P+QE G+ + H G C+ ADDMGLGKT Q LA
Sbjct: 564 EQYHQQKAPDPLPAPEGFCGQLRPYQERGLGWLAFLHRFDQGACL-ADDMGLGKTIQLLA 622
Query: 708 IASYYR 725
+ +
Sbjct: 623 FLQHLK 628
>UniRef50_A1U817 Cluster: Helicase domain protein; n=1; Marinobacter
aquaeolei VT8|Rep: Helicase domain protein -
Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 906
Score = 36.7 bits (81), Expect = 0.58
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +3
Query: 606 LPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIAS 716
LP+Q+ G+ + + + G +IAD+ GLGKT QA+ +++
Sbjct: 358 LPYQKAGIAYAL-QLGNALIADEPGLGKTIQAIGVSN 393
>UniRef50_Q4UIX6 Cluster: DEAD-box family helicase, putative; n=2;
Theileria|Rep: DEAD-box family helicase, putative -
Theileria annulata
Length = 1724
Score = 36.7 bits (81), Expect = 0.58
Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
I+ L P+Q++G+R+ ++ + R + +AD+MGLGKT Q + + +Y
Sbjct: 787 IKGVLRPYQKEGLRWLVSLYERNINGILADEMGLGKTLQTICLLAY 832
>UniRef50_A7ASL0 Cluster: Snf2-related chromatin remodeling factor
SRCAP; n=1; Babesia bovis|Rep: Snf2-related chromatin
remodeling factor SRCAP - Babesia bovis
Length = 1675
Score = 36.7 bits (81), Expect = 0.58
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +3
Query: 567 DLMPIESTIRQKLLPFQEDGVRF--GIARH-GRCMIADDMGLGKTYQALAIASY 719
D + + IR L P+Q DG+R+ + R+ ++AD+MGLGKT Q +A+ ++
Sbjct: 661 DEVQVPCLIRAVLRPYQLDGLRWLASLYRNKSNGILADEMGLGKTLQTIALLAH 714
>UniRef50_Q6CJ38 Cluster: Helicase SWR1; n=2;
Saccharomycetaceae|Rep: Helicase SWR1 - Kluyveromyces
lactis (Yeast) (Candida sphaerica)
Length = 1572
Score = 36.7 bits (81), Expect = 0.58
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +3
Query: 552 DPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRC---MIADDMGLGKTYQALAIASY 719
DP + +P+ S +R L +Q+ G+ + + + ++AD+MGLGKT Q +++ +Y
Sbjct: 748 DPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAY 806
>UniRef50_Q4RCU9 Cluster: Chromosome undetermined SCAF18047, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF18047,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 88
Score = 36.3 bits (80), Expect = 0.77
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 561 NIDLMPIESTIRQKLLPFQEDGVRFGIARH---GRCMIADDMGLGKTYQALAI 710
++D + TI + L +Q +GVRF + C++ DDMGLGKT Q I
Sbjct: 30 DVDGDRVPYTINRYLRDYQREGVRFIYKNYISSSGCILGDDMGLGKTVQVQKI 82
>UniRef50_Q6APK0 Cluster: Probable helicase; n=1; Desulfotalea
psychrophila|Rep: Probable helicase - Desulfotalea
psychrophila
Length = 1399
Score = 36.3 bits (80), Expect = 0.77
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 6/64 (9%)
Frame = +3
Query: 537 KEQTVDPKNI-DLMPI-ESTIRQKLLPFQEDGVRF-GIARH---GRCMIADDMGLGKTYQ 698
K+Q D K++ + P+ +T++ +L +Q +G + G H G C+ ADDMGLGKT Q
Sbjct: 920 KKQLTDIKDVQNYQPVLPTTLQAELRDYQLEGFSWLGRLAHWGVGGCL-ADDMGLGKTLQ 978
Query: 699 ALAI 710
+LA+
Sbjct: 979 SLAL 982
>UniRef50_Q67RQ1 Cluster: SNF2 family helicase; n=1; Symbiobacterium
thermophilum|Rep: SNF2 family helicase - Symbiobacterium
thermophilum
Length = 989
Score = 36.3 bits (80), Expect = 0.77
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +3
Query: 534 LKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-GIARH---GRCMIADDMGLGKTYQA 701
L E+ +P ++ +P L P+Q+ G+ + R G C+ ADDMGLGKT Q
Sbjct: 497 LLERLQEPARMEPVPTPGGFAGTLRPYQQRGLAWLAFLRRWGLGACL-ADDMGLGKTVQL 555
Query: 702 LAIASYYR 725
+A+ + R
Sbjct: 556 IALLLHER 563
>UniRef50_A6W6R2 Cluster: Non-specific serine/threonine protein
kinase; n=1; Kineococcus radiotolerans SRS30216|Rep:
Non-specific serine/threonine protein kinase -
Kineococcus radiotolerans SRS30216
Length = 1029
Score = 36.3 bits (80), Expect = 0.77
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGVRFGIARHGR---CMIADDMGLGKTYQALAIASYYR 725
+P +R L P+Q G+ + A G ++ADDMGLGKT Q LA+ + R
Sbjct: 539 LPDPPGLRATLRPYQRRGLTWLAAMSGLGLGAVLADDMGLGKTVQLLALLLHER 592
>UniRef50_A3QE60 Cluster: SNF2-related protein; n=1; Shewanella
loihica PV-4|Rep: SNF2-related protein - Shewanella
loihica (strain BAA-1088 / PV-4)
Length = 1161
Score = 36.3 bits (80), Expect = 0.77
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRF--GIARHG-RCMIADDMGLGKTYQAL 704
+ +L P+Q +GV + I RHG ++ADDMGLGKT Q L
Sbjct: 658 LNAELRPYQVEGVAWLQFIKRHGFGAILADDMGLGKTLQTL 698
>UniRef50_Q57UN8 Cluster: DNA excision repair protein, putative;
n=3; Trypanosoma|Rep: DNA excision repair protein,
putative - Trypanosoma brucei
Length = 1126
Score = 36.3 bits (80), Expect = 0.77
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAI 710
+ S+I QKL Q DG+R+ + H + + + DDMGLGKT Q A+
Sbjct: 400 LASSIYQKLFDHQRDGLRWLLNLHRQRVGGILGDDMGLGKTIQIAAM 446
>UniRef50_A0BUJ9 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 89
Score = 36.3 bits (80), Expect = 0.77
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 68 LDTIF*IFDTFKMLCSKEE-IEKKRLSALHKRQNKISNTSTSPLNKLNRKTCPLRDNLQK 244
L +F I + +LCS+++ I+KK ++ L K + S S L ++ K L+ NLQK
Sbjct: 18 LSNVFEIIAKYSILCSEDKYIQKKNIAQLSKYEKPRQRRSQSLLQQVLEKKSELQSNLQK 77
Query: 245 NLPF 256
F
Sbjct: 78 RKCF 81
>UniRef50_Q9P793 Cluster: SHREC complex subunit Mit1; n=1;
Schizosaccharomyces pombe|Rep: SHREC complex subunit
Mit1 - Schizosaccharomyces pombe (Fission yeast)
Length = 1418
Score = 36.3 bits (80), Expect = 0.77
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Frame = +3
Query: 603 LLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIAS--YYR 725
L+P+Q G+ + R H C++AD+MGLGKT Q ++ S +YR
Sbjct: 556 LMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYR 601
>UniRef50_UPI00004991E9 Cluster: ATP-dependent chromatin remodeling
protein SNF2H; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
ATP-dependent chromatin remodeling protein SNF2H -
Entamoeba histolytica HM-1:IMSS
Length = 955
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHG---RCMIADDMGLGKTYQALAIASY 719
+L PFQ D + + I RH ++AD+MGLGKT +++++ Y
Sbjct: 104 QLKPFQIDALNWLIRRHHLGVNSILADEMGLGKTLESISLLGY 146
>UniRef50_Q4USY9 Cluster: Helicase; n=3; Xanthomonas campestris pv.
campestris|Rep: Helicase - Xanthomonas campestris pv.
campestris (strain 8004)
Length = 1065
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++ADDMGLGKT QAL + ++YR
Sbjct: 589 LLADDMGLGKTLQALTLMAWYR 610
>UniRef50_A0W7K4 Cluster: SNF2-related; n=1; Geobacter lovleyi
SZ|Rep: SNF2-related - Geobacter lovleyi SZ
Length = 641
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRFG--IARHGR-CMIADDMGLGKTYQALAI 710
+ +L +Q+DGV F IA G C++ D+MGLGKT Q +A+
Sbjct: 182 LEAELYNYQKDGVYFLTLIANQGLGCILGDEMGLGKTVQVIAL 224
>UniRef50_Q5VNP2 Cluster: DNA repair helicase ERCC6-like; n=8; Oryza
sativa|Rep: DNA repair helicase ERCC6-like - Oryza
sativa subsp. japonica (Rice)
Length = 469
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGV----RFGIARHGRCMIADDMGLGKTYQALA 707
+ S I L P Q+DG+ R + G ++ADDMGLGKT QA A
Sbjct: 198 LPSEIFSSLFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTRQASA 244
>UniRef50_A7ANX1 Cluster: SNF2 family N-terminal domain containing
protein; n=1; Babesia bovis|Rep: SNF2 family N-terminal
domain containing protein - Babesia bovis
Length = 1744
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDGVRFGIARH--GRCMIADDMGLGKTYQALAIASYYR 725
+ ID P+ + ++ K P QE GV + + G +++D+MGLGKT Q L SY +
Sbjct: 313 RKIDGRPLRNGVQLK--PHQEFGVDWLLKSFLTGGAILSDEMGLGKTIQTLCFLSYLK 368
>UniRef50_A2EPF9 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 1439
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQALAI 710
+N L P + R++L +Q DG+ R H C++AD+MGLGKT Q + I
Sbjct: 326 ENYPLPPFPT--RRELRDYQIDGINWLRRNWYNHRNCILADEMGLGKTVQGVNI 377
>UniRef50_Q6MW11 Cluster: Related to helicase-DNA-binding protein;
n=3; Neurospora crassa|Rep: Related to
helicase-DNA-binding protein - Neurospora crassa
Length = 1678
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Frame = +3
Query: 594 RQKLLPFQEDGVRFGIA--RHGRCMI-ADDMGLGKTYQALAIAS 716
R KL+ +Q +G+ + + RH R +I AD+MGLGKT Q +A+ S
Sbjct: 736 RGKLMTYQLEGLNWMLYNFRHDRSVILADEMGLGKTVQVVALLS 779
>UniRef50_A5DYP3 Cluster: Helicase SWR1; n=2; Saccharomycetaceae|Rep:
Helicase SWR1 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 1764
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGVRFGIARHGRC---MIADDMGLGKTYQALAIASY 719
+P+ +R L P+Q+ G+ + + + ++AD+MGLGKT Q +++ +Y
Sbjct: 938 VPVPQLLRGTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAY 989
>UniRef50_Q8U3A6 Cluster: ATP-dependent RNA helicase hepa, putative;
n=2; Pyrococcus|Rep: ATP-dependent RNA helicase hepa,
putative - Pyrococcus furiosus
Length = 940
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3
Query: 639 IARHGRCMIADDMGLGKTYQALAIASY 719
+ R R MIAD++GLGKT QAL IA Y
Sbjct: 40 LMRPVRLMIADEIGLGKTIQALLIAKY 66
>UniRef50_Q9VTE2 Cluster: Protein suppressor of underreplication;
n=2; melanogaster subgroup|Rep: Protein suppressor of
underreplication - Drosophila melanogaster (Fruit fly)
Length = 962
Score = 35.9 bits (79), Expect = 1.0
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +3
Query: 534 LKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF---GIARHGRCMIADDMGLGKTYQAL 704
+ EQT + + D + S + Q L FQ D VRF +A+ C++ D+ GLGK
Sbjct: 5 VSEQTPEVRLTDEALVTSHVTQYLKSFQLDAVRFVYDRLAKREFCILNDESGLGKVATVA 64
Query: 705 AIAS 716
A+ S
Sbjct: 65 ALLS 68
>UniRef50_O43065 Cluster: Probable helicase mot1; n=4;
Schizosaccharomyces pombe|Rep: Probable helicase mot1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1953
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ ++P ++ I I L +Q++GV + HG ++ DDMGLGKT Q +
Sbjct: 1337 EQMLNPSKVEAFSIPVPISADLRKYQQEGVNWLAFLNKYELHG--ILCDDMGLGKTLQTI 1394
Query: 705 AIAS 716
I +
Sbjct: 1395 CIVA 1398
>UniRef50_UPI0000D56886 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 384
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 110 CSKEEIEKKRLSALHKRQNKISNTSTSPL 196
C++EEIE+KRL AL KR +K S++P+
Sbjct: 300 CTEEEIERKRLEALAKRNSKKRQESSAPI 328
>UniRef50_UPI000069FCD2 Cluster: CDNA FLJ90238 fis, clone
NT2RM2000632, weakly similar to EXCISION REPAIR PROTEIN
ERCC-6.; n=1; Xenopus tropicalis|Rep: CDNA FLJ90238 fis,
clone NT2RM2000632, weakly similar to EXCISION REPAIR
PROTEIN ERCC-6. - Xenopus tropicalis
Length = 1224
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGVRF--GIARHGRC--MIADDMGLGKTYQALAIAS 716
+ I + + KL Q++GV F + R GR ++ADDMGLGKT Q + S
Sbjct: 88 LTIYNELYNKLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVIGFLS 139
>UniRef50_Q7WXX1 Cluster: DNA helicase; n=11; Pseudomonas|Rep: DNA
helicase - Pseudomonas aeruginosa
Length = 657
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 579 IESTIR-QKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIAS 716
IE+ ++ LL Q DG+ + R ++ADDMGLGKT QA+ AS
Sbjct: 242 IEAALQGYSLLAHQPDGIAHLLQRTS-ALLADDMGLGKTRQAVIAAS 287
>UniRef50_Q21RH3 Cluster: SNF2-related; n=1; Rhodoferax
ferrireducens T118|Rep: SNF2-related - Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
Length = 1178
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-GIARHGRC--MIADDMGLGKTY 695
L+ L +Q + +P+ ++++ L P+Q+ G+ + R ++ADDMGLGKT
Sbjct: 686 LRKLVKQLSGQTELPTVPVPTSVQASLRPYQQQGLNWLQFLRQYSLGGILADDMGLGKTL 745
Query: 696 QAL 704
Q L
Sbjct: 746 QTL 748
>UniRef50_A1ASL3 Cluster: SNF2-related protein; n=1; Pelobacter
propionicus DSM 2379|Rep: SNF2-related protein -
Pelobacter propionicus (strain DSM 2379)
Length = 1164
Score = 35.5 bits (78), Expect = 1.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIA----RHGRCMIADDMGLGKTYQALA 707
E V+ + I + S + L P+Q DG + R G C+ ADDMGLGKT Q ++
Sbjct: 683 ESLVNFERIPRRQLPSGLNATLRPYQRDGYHWLAFLYEHRFGACL-ADDMGLGKTVQGIS 741
Query: 708 I 710
+
Sbjct: 742 L 742
>UniRef50_Q01KF9 Cluster: OSIGBa0158F05.11 protein; n=4; Oryza
sativa|Rep: OSIGBa0158F05.11 protein - Oryza sativa
(Rice)
Length = 863
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +3
Query: 582 ESTIRQKLLPFQEDGVRFGIARH----GRCMIADDMGLGKTYQALAIASYYR 725
ES L P+Q GV F + H G ++AD+MGLGKT QA+ + R
Sbjct: 306 ESEFEPILKPYQLVGVNFLLLLHRKNIGGAILADEMGLGKTVQAVTYLTLLR 357
>UniRef50_Q01FM8 Cluster: Chromodomain-helicase-DNA-binding protein
6; n=2; Ostreococcus|Rep:
Chromodomain-helicase-DNA-binding protein 6 -
Ostreococcus tauri
Length = 1390
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/40 (47%), Positives = 30/40 (75%), Gaps = 3/40 (7%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIA--RHGR-CMIADDMGLGKTYQALAI 710
+L +Q++GV++ R GR C++AD+MGLGKT Q+LA+
Sbjct: 305 ELRSYQKEGVKWMSFNFRAGRGCILADEMGLGKTAQSLAL 344
>UniRef50_Q4QA20 Cluster: DNA repair protein, putative; n=3;
Leishmania|Rep: DNA repair protein, putative -
Leishmania major
Length = 1092
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +3
Query: 510 IPPYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRC-----MIADD 674
+P ++ + E V ++ M ST+ + LLP+Q++G+ + + + ++AD+
Sbjct: 116 MPEHLKPLDPEDLVHRGKMEQMAPPSTLLRHLLPYQKEGMGWMVRQEVESPVKGGILADE 175
Query: 675 MGLGKTYQALAIASYYR 725
MG+GKT Q + + +R
Sbjct: 176 MGMGKTIQTVGMMLAHR 192
>UniRef50_A7RQM3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 614
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGVRFGIARHGR----CMIADDMGLGKTYQALAIAS 716
+ + + I +L +Q +GV+F + +H R ++ DDMGLGKT Q +A+ S
Sbjct: 2 LQVPAPINCRLRDYQREGVQF-LYQHYRSNNGAILGDDMGLGKTVQVIALLS 52
>UniRef50_Q2TX77 Cluster: Helicase-like transcription factor
HLTF/DNA helicase RAD5; n=1; Aspergillus oryzae|Rep:
Helicase-like transcription factor HLTF/DNA helicase
RAD5 - Aspergillus oryzae
Length = 966
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = +3
Query: 603 LLPFQEDGVRFGIA----RHGRCMIADDMGLGKTYQALAI 710
L+ Q+ GVR+ A H ++ADDMGLGKT QALA+
Sbjct: 263 LMEHQKQGVRWMTAMEKSHHRGGILADDMGLGKTVQALAL 302
>UniRef50_A7TGL6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1902
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVR---FGIARHGRCMIADDMGLGKTYQALAI 710
+Q +DP + I+ L +Q++GV F H ++ DDMGLGKT Q + I
Sbjct: 1291 QQMMDPSKAKPFKLPVAIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICI 1350
>UniRef50_A2BGR3 Cluster: Novel protein; n=7; Eumetazoa|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1451
Score = 35.1 bits (77), Expect = 1.8
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 537 KEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHGRC--MIADDMGLGKTYQAL 704
+E+ V+ N L + + KL Q++GV F + R GR ++ADDMGLGKT Q +
Sbjct: 84 EEEFVNVNNSGLK-LYKGLYDKLYDHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVI 142
Query: 705 AIAS 716
+ S
Sbjct: 143 SFLS 146
>UniRef50_Q67KZ1 Cluster: Snf2 family helicase-like protein; n=1;
Symbiobacterium thermophilum|Rep: Snf2 family
helicase-like protein - Symbiobacterium thermophilum
Length = 499
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 597 QKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALA 707
++L +Q DG RF + H ++ D+MGLGK+ QA++
Sbjct: 53 EELYDYQVDGARF-LMEHPVALLGDEMGLGKSIQAIS 88
>UniRef50_A6DMQ1 Cluster: Swf/snf family helicase; n=1; Lentisphaera
araneosa HTCC2155|Rep: Swf/snf family helicase -
Lentisphaera araneosa HTCC2155
Length = 1308
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Frame = +3
Query: 594 RQKLLPFQEDGVRF--GIARHGR-CMIADDMGLGKTYQALAIAS 716
+ +L +QE+G ++ +A G +ADDMGLGKT QALA+ S
Sbjct: 853 KAELRSYQEEGFQWLSRMAEWGAGACLADDMGLGKTVQALAVLS 896
>UniRef50_A1K3Q1 Cluster: SWI/SNF family helicase; n=3;
Betaproteobacteria|Rep: SWI/SNF family helicase -
Azoarcus sp. (strain BH72)
Length = 1098
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +3
Query: 552 DPKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHGRC-MIADDMGLGKTYQALA 707
D I+ +P + +L P+Q +G+ + + R+ ++ADDMGLGKT Q LA
Sbjct: 608 DATGIEAVPQPKGFKAELRPYQLEGLAWLQHLVRNNLAGILADDMGLGKTAQTLA 662
>UniRef50_Q384V0 Cluster: SNF2 DNA repair protein, putative; n=3;
Trypanosoma|Rep: SNF2 DNA repair protein, putative -
Trypanosoma brucei
Length = 952
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 567 DLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQAL 704
DL+P + + L Q DG+ ++ GR M AD+MG+GKT QA+
Sbjct: 173 DLLPPK--LMAALHRHQVDGICKALSFGGRAMFADEMGVGKTLQAI 216
>UniRef50_Q17IV5 Cluster: Chromodomain helicase DNA binding protein;
n=5; Bilateria|Rep: Chromodomain helicase DNA binding
protein - Aedes aegypti (Yellowfever mosquito)
Length = 4467
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Frame = +3
Query: 600 KLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQAL 704
+L P+Q +G+ R+ + C++AD+MGLGKT Q+L
Sbjct: 1929 RLRPYQLEGLNWLRYSWYKGNNCILADEMGLGKTIQSL 1966
>UniRef50_UPI00015B571A Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 899
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Frame = +3
Query: 552 DPKNIDLMPIESTIRQKLLPFQEDGVRF--------GIARHGRCMIADDMGLGKTYQALA 707
D K I + ++ + L P Q +G+ F A H ++AD+MGLGKT Q ++
Sbjct: 291 DDKKIHEVSVDGCLASVLRPHQREGIVFLYKCIMGMNSAHHKGAILADEMGLGKTLQCIS 350
Query: 708 I 710
+
Sbjct: 351 L 351
>UniRef50_UPI0000E81954 Cluster: PREDICTED: similar to RP11-346B7.2;
n=1; Gallus gallus|Rep: PREDICTED: similar to
RP11-346B7.2 - Gallus gallus
Length = 1132
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 561 NIDLMPIESTIRQKLLPFQEDGVRF---GIARHGRCMIADDMGLGKTYQALA 707
N D +P TI + L +Q +G +F A C++ DDMGLGKT Q ++
Sbjct: 114 NGDFIPY--TINRYLRGYQREGAQFLYWHYANKRGCILGDDMGLGKTVQVIS 163
>UniRef50_UPI0000499756 Cluster: DNA repair protein RAD54; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
RAD54 - Entamoeba histolytica HM-1:IMSS
Length = 884
Score = 34.7 bits (76), Expect = 2.4
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Frame = +3
Query: 531 ILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF----------GIARHGRCMIADDMG 680
+L + TV + + ++ + KL P Q+ GV+F G +G C++AD MG
Sbjct: 249 VLYQPTVTSRKEVAVVVDPLLGLKLRPHQKAGVKFMYDCVMGLKQGFKGNG-CILADGMG 307
Query: 681 LGKTYQALAI 710
LGKT QA+ +
Sbjct: 308 LGKTIQAVTL 317
>UniRef50_UPI0000ECC53B Cluster: CDNA FLJ90238 fis, clone
NT2RM2000632, weakly similar to EXCISION REPAIR PROTEIN
ERCC-6.; n=2; Gallus gallus|Rep: CDNA FLJ90238 fis,
clone NT2RM2000632, weakly similar to EXCISION REPAIR
PROTEIN ERCC-6. - Gallus gallus
Length = 560
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +3
Query: 600 KLLPFQEDGVRF--GIARHGRC--MIADDMGLGKTYQALAIAS 716
KL Q +GV F + R GR ++ADDMGLGKT Q +A S
Sbjct: 79 KLFQHQREGVAFLYRLHREGRPGGILADDMGLGKTIQIIAFLS 121
>UniRef50_Q6MB41 Cluster: Putative uncharacterized protein; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative uncharacterized protein - Protochlamydia
amoebophila (strain UWE25)
Length = 1256
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +3
Query: 573 MPIESTIRQKLLPFQEDGVRF-GIARHGRC--MIADDMGLGKTYQALAI 710
+P + + L P+QE GV++ H + ++ DDMGLGKT+QA+A+
Sbjct: 763 VPNITGLNSHLRPYQEIGVQWLWFLYHQQLAGLLCDDMGLGKTHQAMAL 811
>UniRef50_A4JVW1 Cluster: SNF2-related protein; n=1; Burkholderia
vietnamiensis G4|Rep: SNF2-related protein -
Burkholderia vietnamiensis (strain G4 / LMG 22486)
(Burkholderiacepacia (strain R1808))
Length = 599
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +3
Query: 531 ILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAI 710
+LK Q + I P + +L FQ++G+ + I + R ++ADDMGLGKT A A+
Sbjct: 100 VLKRQEILAHPIVRYP-DVLFTGELRQFQQEGLDW-ILTNKRTLLADDMGLGKTVTASAV 157
>UniRef50_Q9VC94 Cluster: CG5728-PA; n=2; Sophophora|Rep: CG5728-PA
- Drosophila melanogaster (Fruit fly)
Length = 1430
Score = 34.7 bits (76), Expect = 2.4
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +1
Query: 220 SFKG*FAEKPSILTPRSDQTTQNVPVTKV-VTGNVYLISEDRFEVNPSEFCAPLINIFKT 396
+FKG + +K +L+ +T V + V ++Y S+D VN FC IN
Sbjct: 391 NFKGNY-DKDEVLSKYGRKTKHKVRILGYDVIESLYYCSDDPNVVNEKLFCLEDINAGDL 449
Query: 397 IPSRIYA--DKTKLWNFSIEDYNQLMSKVAPLAPHV 498
+ ++I+ DK K W+ I N ++ + LAP+V
Sbjct: 450 VTAKIFKKDDKIKGWSVRIGKVNGILEQFY-LAPNV 484
>UniRef50_Q7QSX1 Cluster: GLP_44_15227_12651; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_44_15227_12651 - Giardia lamblia
ATCC 50803
Length = 858
Score = 34.7 bits (76), Expect = 2.4
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Frame = +3
Query: 393 NNTVKDICRQNKIMEFFNRRLQSVNVXXXXXXXXXXA-WCIPPYVLKI-LKEQTVDPKNI 566
N +KDI + K F RL V V W +P + +K +
Sbjct: 256 NQHIKDI--EKKTRNFTAERLNGVLVRANVCIPLALLNWSLPVIITNNRIKREEHKSYKY 313
Query: 567 DLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
+ P + L P+Q + + F + R G+C++AD +G QAL Y+
Sbjct: 314 SIDPSTPNL-YSLRPWQREAIEFYLLRGGKCILADPPEMGVAAQALLSTYQYK 365
>UniRef50_Q5CIW7 Cluster: SNF2 domain/helicase domain-containing
protein; n=2; Cryptosporidium|Rep: SNF2 domain/helicase
domain-containing protein - Cryptosporidium hominis
Length = 844
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
LLP+Q GV + ++ + + +AD+MGLGKT Q +A+ +Y
Sbjct: 556 LLPYQIIGVEWMLSLYNNKLHGILADEMGLGKTVQTIALLTY 597
>UniRef50_Q57Z97 Cluster: Transcription activator, putative; n=1;
Trypanosoma brucei|Rep: Transcription activator,
putative - Trypanosoma brucei
Length = 948
Score = 34.7 bits (76), Expect = 2.4
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 531 ILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQA 701
+ Q + PK + S L P+Q DGV+F + R M + DDMGLGKT Q
Sbjct: 196 VQSSQFLPPKILSRETTNSPDGYVLRPYQFDGVQFLVNRFHSGMPSVLGDDMGLGKTAQV 255
Query: 702 LA 707
A
Sbjct: 256 SA 257
>UniRef50_Q5K7U5 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 842
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARH-GRC---MIADDMGLGKTYQALA 707
KL+P Q GVR+ R GR ++ADDMGLGKT Q LA
Sbjct: 248 KLMPHQVRGVRWMKQRETGRKYGGILADDMGLGKTVQTLA 287
>UniRef50_Q2UE80 Cluster: Chromatin remodeling complex WSTF-ISWI;
n=1; Aspergillus oryzae|Rep: Chromatin remodeling
complex WSTF-ISWI - Aspergillus oryzae
Length = 774
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +3
Query: 543 QTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIA 713
+++DP+ + ++ ++ +L P+Q G+ F + + +AD+MGLGKT Q LA+
Sbjct: 47 KSLDPQPTGELTMQPRLQSQLKPYQLRGLSFLLYLRDNGIGGILADEMGLGKTIQTLALF 106
Query: 714 SYYR 725
+ +
Sbjct: 107 QHIK 110
>UniRef50_Q2HGP4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1793
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +3
Query: 594 RQKLLPFQEDGVRFGIA--RHGRCMI-ADDMGLGKTYQALAIASYY 722
R KL+ +Q DG+ + + R R +I AD+MGLGKT Q +A+ S +
Sbjct: 841 RGKLMQYQLDGLNWMLYNFREDRSVILADEMGLGKTVQVVALLSSF 886
>UniRef50_Q9H4L7 Cluster: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
containing DEAD/H box 1; n=32; Eumetazoa|Rep:
SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1 - Homo sapiens (Human)
Length = 1026
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFG--IARHG-RCMIADDMGLGKTYQALAIASY 719
L P+Q+ G+ + + +HG ++AD+MGLGKT QA+A +Y
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY 538
>UniRef50_P79051 Cluster: DNA repair protein rhp16; n=5;
Ascomycota|Rep: DNA repair protein rhp16 -
Schizosaccharomyces pombe (Fission yeast)
Length = 861
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 519 YVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGV----RFGIARHGRCMIADDMGLG 686
+V + L+E+ P+ + + + LLPFQ +GV R + G ++AD+MG+G
Sbjct: 229 HVWEKLEEEA--PREVKQIEQPKELVLNLLPFQREGVYWLKRQEDSSFGGGILADEMGMG 286
Query: 687 KTYQALAI 710
KT Q +A+
Sbjct: 287 KTIQTIAL 294
>UniRef50_P31244 Cluster: DNA repair protein RAD16; n=5;
Dikarya|Rep: DNA repair protein RAD16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 790
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIAR----HGRCMIADDMGLGKTYQALAI 710
KLLPFQ +G+ + I++ + ++AD+MG+GKT Q +A+
Sbjct: 183 KLLPFQLEGLHWLISQEESIYAGGVLADEMGMGKTIQTIAL 223
>UniRef50_Q9HCK8 Cluster: Chromodomain-helicase-DNA-binding protein
8; n=32; Tetrapoda|Rep:
Chromodomain-helicase-DNA-binding protein 8 - Homo
sapiens (Human)
Length = 2302
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 516 PYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVR---FGIARHGRCMIADDMGLG 686
P + ++ + Q K ++L E R +L +Q +GV F C++AD+MGLG
Sbjct: 504 PELKRVNRPQASAWKKLELSH-EYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG 562
Query: 687 KTYQALA 707
KT Q++A
Sbjct: 563 KTIQSIA 569
>UniRef50_UPI0000DB6E3E Cluster: PREDICTED: similar to CG5899-PA,
isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG5899-PA, isoform A - Apis mellifera
Length = 830
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASYYR 725
KL P+Q G+ + H + + +AD+MGLGKT Q +A +Y +
Sbjct: 261 KLAPYQMVGLNWLAVMHAQNVNGILADEMGLGKTVQVIAFLTYLK 305
>UniRef50_UPI00004997F5 Cluster: helicase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: helicase - Entamoeba
histolytica HM-1:IMSS
Length = 837
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHGR-----CMIADDMGLGKTYQALA 707
+LLP Q G+++ H C++ DDMGLGKT + LA
Sbjct: 102 QLLPHQRTGIKWLWEHHNETTIHGCILGDDMGLGKTVEILA 142
>UniRef50_Q4T1X3 Cluster: Chromosome 1 SCAF10457, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF10457, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1232
Score = 34.3 bits (75), Expect = 3.1
Identities = 18/44 (40%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIAR--HGR--CMIADDMGLGKTYQALAIASY 719
+L P+Q DGV++ ++R H + C++ D+MGLGKT Q++++ Y
Sbjct: 5 QLKPYQLDGVQW-LSRCFHKQQGCILGDEMGLGKTCQSISLLLY 47
>UniRef50_Q1U6X3 Cluster: SNF2-related:Helicase-like:Zinc finger,
SWIM-type; n=3; Lactobacillus reuteri|Rep:
SNF2-related:Helicase-like:Zinc finger, SWIM-type -
Lactobacillus reuteri 100-23
Length = 1162
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAI 710
+ + + L P+Q DGV++ +A H ++AD+MGLGKT Q + +
Sbjct: 696 VPANLHATLRPYQYDGVQWLMALMKYHFGGLLADEMGLGKTLQIITV 742
>UniRef50_A4IMU6 Cluster: Patative DNA/RNA helicase SNF2 family;
n=1; Geobacillus thermodenitrificans NG80-2|Rep:
Patative DNA/RNA helicase SNF2 family - Geobacillus
thermodenitrificans (strain NG80-2)
Length = 874
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 576 PIESTIRQKLLPFQEDGVRF--GIARHGRC-MIADDMGLGKTYQALA 707
P+ S ++ L P Q +G + +A R ++ADDMGLGKT Q +A
Sbjct: 408 PVPSELQAALFPHQMEGFEWLCHLAEQERGGLLADDMGLGKTIQVIA 454
>UniRef50_A4C3E7 Cluster: Helicase; n=1; Pseudoalteromonas tunicata
D2|Rep: Helicase - Pseudoalteromonas tunicata D2
Length = 1402
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFG--IARHGR-CMIADDMGLGKTYQALAI 710
I ST++ L +Q G + +A G +ADDMGLGKT QALA+
Sbjct: 927 IPSTLQASLREYQLQGFDWASRLAHWGAGACLADDMGLGKTLQALAL 973
>UniRef50_A1VL85 Cluster: SNF2-related protein; n=6; Bacteria|Rep:
SNF2-related protein - Polaromonas naphthalenivorans
(strain CJ2)
Length = 899
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +3
Query: 591 IRQKLLPFQEDGVR--FGIARHGR-CMIADDMGLGKTYQALAI 710
++ L P+Q+ GVR + + R G +ADDMGLGKT Q L++
Sbjct: 420 LQATLRPYQQAGVRWLYLLTRLGLGACLADDMGLGKTIQVLSL 462
>UniRef50_Q00ZA8 Cluster: Putative SNF2 domain-containing protein;
n=1; Ostreococcus tauri|Rep: Putative SNF2
domain-containing protein - Ostreococcus tauri
Length = 1782
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-GIARHGRC--MIADDMGLGKTYQALAI 710
E +D I+ + + L P+Q+DGV + R + +ADDMGLGKT Q+ I
Sbjct: 1207 EALLDNSKIEDFKLPFKCARTLRPYQQDGVNWLAFLRRFKLHGALADDMGLGKTLQSTCI 1266
>UniRef50_A4S4D1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein - Ostreococcus
lucimarinus CCE9901
Length = 1769
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-GIARHGRC--MIADDMGLGKTYQALAI 710
E +D I+ + + L P+Q+DGV + R + +ADDMGLGKT Q+ I
Sbjct: 1173 EALLDNSKIEDFKLPFKCARTLRPYQQDGVNWLAFLRRFKLHGALADDMGLGKTLQSTCI 1232
>UniRef50_Q4YWQ3 Cluster: DNA repair protein rhp16, putative; n=8;
Plasmodium (Vinckeia)|Rep: DNA repair protein rhp16,
putative - Plasmodium berghei
Length = 1545
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/48 (33%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGI----ARHGRCMIADDMGLGKTYQALAI 710
+ ++ +LL +Q++GV + I ++H ++AD+MG+GKT QA+ +
Sbjct: 218 VPKELKFELLKYQKEGVSWMINQENSKHKGGILADEMGMGKTIQAITL 265
>UniRef50_A2EY36 Cluster: SNF2 family N-terminal domain containing
protein; n=3; Trichomonas vaginalis G3|Rep: SNF2 family
N-terminal domain containing protein - Trichomonas
vaginalis G3
Length = 1326
Score = 34.3 bits (75), Expect = 3.1
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 552 DPKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHG-RCMIADDMGLGKTYQALAIAS 716
DPK I M I L +Q DG+++ + G ++ADDMGLGKT+Q L S
Sbjct: 799 DPKLIKPMEILPEPSVSPLDYQFDGIKWLGFLLEFGLNGILADDMGLGKTFQTLCAIS 856
>UniRef50_Q2NKX8 Cluster: Excision repair cross-complementing rodent
repair deficiency, complementation group 6-like; n=20;
Mammalia|Rep: Excision repair cross-complementing rodent
repair deficiency, complementation group 6-like - Homo
sapiens (Human)
Length = 1250
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRF--GIARHGRC--MIADDMGLGKTYQALAIAS 716
+ +L Q++G+ F + R GR ++ADDMGLGKT Q +A S
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLS 137
>UniRef50_Q8SQP6 Cluster: RAD26-LIKE DNA REPAIR AND RECOMBINATION
PROTEIN; n=1; Encephalitozoon cuniculi|Rep: RAD26-LIKE
DNA REPAIR AND RECOMBINATION PROTEIN - Encephalitozoon
cuniculi
Length = 695
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHGR---CMIADDMGLGKTYQAL 704
L P+Q+DGVR+ + + ++ADDMGLGKT Q +
Sbjct: 151 LFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVI 187
>UniRef50_Q8NIR3 Cluster: Related to DNA repair protein RAD26; n=12;
Pezizomycotina|Rep: Related to DNA repair protein RAD26
- Neurospora crassa
Length = 1178
Score = 34.3 bits (75), Expect = 3.1
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRF----GIARHGRCMIADDMGLGKTYQALA 707
I + I Q L +Q +GV+F + + G C++ DDMGLGKT Q A
Sbjct: 195 IPACIAQYLRDYQVEGVKFLHQKFVYQRG-CILGDDMGLGKTVQVAA 240
>UniRef50_Q9Y620 Cluster: DNA repair and recombination protein
RAD54B; n=21; Eumetazoa|Rep: DNA repair and
recombination protein RAD54B - Homo sapiens (Human)
Length = 910
Score = 34.3 bits (75), Expect = 3.1
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 8/44 (18%)
Frame = +3
Query: 603 LLPFQEDGVRF------GIARHGRC--MIADDMGLGKTYQALAI 710
L P Q++G+ F G+ +GRC ++AD+MGLGKT Q +++
Sbjct: 296 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISL 339
>UniRef50_Q08773 Cluster: ISWI chromatin-remodeling complex ATPase
ISW2; n=4; Saccharomycetaceae|Rep: ISWI
chromatin-remodeling complex ATPase ISW2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1120
Score = 34.3 bits (75), Expect = 3.1
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +3
Query: 537 KEQTVDPKNIDLMPIEST--IRQ-KLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQ 698
+E+ VD D+ ES ++ KL +Q G+ + I+ H + +AD+MGLGKT Q
Sbjct: 159 EEEIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQ 218
Query: 699 ALAIASYYR 725
++ Y R
Sbjct: 219 TISFLGYLR 227
>UniRef50_UPI000155BECB Cluster: PREDICTED: similar to similar
nucleotide excision repair proteins-related, partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
similar nucleotide excision repair proteins-related,
partial - Ornithorhynchus anatinus
Length = 567
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDGVRFGI----ARHGRCMIADDMGLGKTYQALAI 710
K I+ P + LLPFQ++G+ + +++ ++AD+MG+GKT Q +A+
Sbjct: 261 KVIEPQPQPQQLLVNLLPFQKEGLSWMCYQEDSKYKGGILADEMGMGKTIQTIAL 315
>UniRef50_UPI0000F2008D Cluster: PREDICTED: similar to Rad54b; n=1;
Danio rerio|Rep: PREDICTED: similar to Rad54b - Danio
rerio
Length = 1067
Score = 33.9 bits (74), Expect = 4.1
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 8/52 (15%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRF------GIARHGRC--MIADDMGLGKTYQALAI 710
I+ + L P Q++GV F G+ GRC ++AD+MGLGKT Q + +
Sbjct: 445 IDPHLTNHLRPHQKEGVVFLYECLMGMRLAGRCGAILADEMGLGKTLQCVCV 496
>UniRef50_UPI0000F1D9E5 Cluster: PREDICTED: similar to chromodomain
helicase DNA binding protein 8; n=2; Danio rerio|Rep:
PREDICTED: similar to chromodomain helicase DNA binding
protein 8 - Danio rerio
Length = 2621
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 600 KLLPFQEDGVR---FGIARHGRCMIADDMGLGKTYQALAIAS 716
+L +Q +GV F C++AD+MGLGKT Q++A+ S
Sbjct: 953 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLS 994
>UniRef50_UPI00005103F6 Cluster: COG0553: Superfamily II DNA/RNA
helicases, SNF2 family; n=1; Brevibacterium linens
BL2|Rep: COG0553: Superfamily II DNA/RNA helicases, SNF2
family - Brevibacterium linens BL2
Length = 1140
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 564 IDLMPIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASYYR 725
I + + I L P+Q++G + A + +ADDMGLGKT QAL++ ++ +
Sbjct: 666 IPSLDVPEGIEATLRPYQQEGFSWLAALWSSGLGGILADDMGLGKTLQALSLFTHIK 722
>UniRef50_Q9PLL8 Cluster: Helicase, Snf2 family; n=11;
Chlamydiales|Rep: Helicase, Snf2 family - Chlamydia
muridarum
Length = 1181
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +3
Query: 534 LKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIAR----HGRCMIADDMGLGKTYQA 701
+++Q + + + S I+ L +Q+DGV + + R H ++ADDMGLGKT Q
Sbjct: 694 IQKQIRGEVDFEFQEVPSQIQATLRSYQKDGVHW-LERLRKMHLNGILADDMGLGKTLQT 752
Query: 702 LAIASYYR 725
+ + R
Sbjct: 753 IIAVTQSR 760
>UniRef50_Q7NAF6 Cluster: HepA/SNF2; n=1; Mycoplasma
gallisepticum|Rep: HepA/SNF2 - Mycoplasma gallisepticum
Length = 1132
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 567 DLMPIESTIRQKLLPFQEDGVRFG--IARHG-RCMIADDMGLGKTYQALAIASYY 722
D + I+ Q L P+Q++G ++ + + G ++ADDMGLGKT Q +++ S +
Sbjct: 653 DELTIQEPFDQLLWPYQKEGHKWLRILQKFGFGGIMADDMGLGKTIQMISVISQF 707
>UniRef50_Q47YP1 Cluster: Snf2 family protein; n=1; Colwellia
psychrerythraea 34H|Rep: Snf2 family protein - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 1134
Score = 33.9 bits (74), Expect = 4.1
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-GIARHGRC--MIADDMGLGKTY 695
L+ L ++ D + + +P+ + L +Q G+ + R + ++ADDMGLGKT
Sbjct: 636 LRALADKLKDFQQVTTIPVPEGLNATLRTYQHQGLNWLQFLREYQLNGILADDMGLGKTI 695
Query: 696 QALA 707
Q LA
Sbjct: 696 QTLA 699
>UniRef50_Q11P03 Cluster: Superfamily II DNA/RNA helicase, SNF2
family; n=3; Flexibacteraceae|Rep: Superfamily II
DNA/RNA helicase, SNF2 family - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 977
Score = 33.9 bits (74), Expect = 4.1
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDG---VRF-GIARHGRCMIADDMGLGKTYQALA 707
E+ D + I+ + + + +L P+Q+ G +RF G C+ ADDMGLGKT Q LA
Sbjct: 498 ERLRDFQEIEDYDLPAEFKGELRPYQKAGYNWMRFLNQYNFGGCL-ADDMGLGKTVQTLA 556
Query: 708 I 710
+
Sbjct: 557 L 557
>UniRef50_A5ZF77 Cluster: Putative uncharacterized protein; n=2;
Bacteroides|Rep: Putative uncharacterized protein -
Bacteroides caccae ATCC 43185
Length = 948
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARH----GRCMIADDMGLGKTYQALAIASY 719
+ ++ L P+Q+ G + + H G C+ ADDMGLGKT Q L + +
Sbjct: 481 VPKALKATLRPYQQKGFSWMMHLHKLGFGGCL-ADDMGLGKTLQTLTLLQH 530
>UniRef50_A5P8I0 Cluster: SNF2 family helicase; n=2;
Alphaproteobacteria|Rep: SNF2 family helicase -
Erythrobacter sp. SD-21
Length = 556
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Frame = +3
Query: 567 DLMPIEST--IRQKLLPFQEDGVRF--GIARH-GRCMIADDMGLGKTYQALAI 710
DL P + + L P+Q GV + RH G ++AD+MGLGKT Q +A+
Sbjct: 81 DLRPDQDIPGLHATLFPYQAQGVAWMDQTIRHTGGLILADEMGLGKTIQIIAL 133
>UniRef50_A2X9X1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 912
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
Frame = +3
Query: 561 NIDLMPIESTIRQKLLPFQEDGVRF------GIARH---GRCMIADDMGLGKTYQALAI 710
N + ++ + + L P Q +GV+F G+ C++ADDMGLGKT Q++ +
Sbjct: 221 NFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITL 279
>UniRef50_Q54UZ8 Cluster: CHD gene family protein containing
chromodomain, helicase domain, and DNA-binding domain;
n=1; Dictyostelium discoideum AX4|Rep: CHD gene family
protein containing chromodomain, helicase domain, and
DNA-binding domain - Dictyostelium discoideum AX4
Length = 2373
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDGVRF-GIARHGR--CMIADDMGLGKTYQALAIASYYR 725
K ID P T KL P+Q +G+ + H + ++ D+MGLGKT Q+++I R
Sbjct: 494 KKIDQSPDYFTKGNKLRPYQLEGLNWLSFCWHEQRNSILGDEMGLGKTVQSVSILETLR 552
>UniRef50_Q383K6 Cluster: SNF2 DNA repair protein, putative; n=1;
Trypanosoma brucei|Rep: SNF2 DNA repair protein,
putative - Trypanosoma brucei
Length = 1211
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = +3
Query: 561 NIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASYY 722
++ L+ + RQ L +Q +R+ + R + +AD+MGLGKT Q +A+ +YY
Sbjct: 226 SLSLLDTQGGSRQ-LRDYQRSALRWMTNLYSRGLNGILADEMGLGKTIQTIALLAYY 281
>UniRef50_A5K729 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 4216
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 452 SSIEKFHNFVLSAYILDGIVLNIFISGAQNSDGFTSNLSSDIKYTFPVTTLV 297
S I++ +NFV YIL+ I L+++ NS F + +K F + LV
Sbjct: 132 SIIQRIYNFVRLKYILENICLHVYFEDLDNSSEFYQVNENIVKKNFHASELV 183
>UniRef50_A0BMB8 Cluster: Chromosome undetermined scaffold_116,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_116,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 761
Score = 33.9 bits (74), Expect = 4.1
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Frame = +3
Query: 513 PPYVLKILKEQTVDPKNIDL--MPIESTIRQKLLPFQEDGVRFGI----ARHGR----CM 662
P K ++ V+PK L ++ + ++L Q +GVRF + + G+ C+
Sbjct: 117 PKKPFKSKQQPDVEPKFTILEGFDVDQFLYKQLRAHQIEGVRFMLECVTGKKGKSIRGCI 176
Query: 663 IADDMGLGKTYQALAI 710
+AD MGLGKT QA+ +
Sbjct: 177 LADSMGLGKTLQAITL 192
>UniRef50_Q1DUU1 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 835
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/45 (33%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Frame = +3
Query: 600 KLLPFQEDGVRF--GIARHGRC-MIADDMGLGKTYQALAIASYYR 725
K+ +Q +G+ + + +G C ++AD+MGLGKT QA+++ ++++
Sbjct: 202 KMREYQLEGLEWLKSLWMNGLCGILADEMGLGKTVQAISLIAFFK 246
>UniRef50_A4RF63 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 901
Score = 33.9 bits (74), Expect = 4.1
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 10/50 (20%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRF------GIARHGRC----MIADDMGLGKTYQALAI 710
I KLLP Q++GV + G + G+ ++ADDMGLGKT Q++++
Sbjct: 94 ITVKLLPHQQEGVEWMKGRELGPVKRGKVPKGGILADDMGLGKTLQSISL 143
>UniRef50_Q9S775 Cluster: CHD3-type chromatin-remodeling factor
PICKLE; n=9; Magnoliophyta|Rep: CHD3-type
chromatin-remodeling factor PICKLE - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1384
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Frame = +3
Query: 603 LLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQALAI 710
L P+Q +G+ RF ++ ++AD+MGLGKT Q++A+
Sbjct: 273 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAL 311
>UniRef50_UPI00015B6257 Cluster: PREDICTED: similar to chromodomain
helicase DNA binding protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to chromodomain
helicase DNA binding protein - Nasonia vitripennis
Length = 4629
Score = 33.5 bits (73), Expect = 5.4
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 603 LLPFQEDGVR---FGIARHGRCMIADDMGLGKTYQALAIAS 716
L P+Q +G+ F + C++AD+MGLGKT Q+L +
Sbjct: 1873 LRPYQLEGLNWLLFSWYNNHNCILADEMGLGKTIQSLTFVN 1913
>UniRef50_UPI00015B4F17 Cluster: PREDICTED: similar to PASG; n=2;
Nasonia vitripennis|Rep: PREDICTED: similar to PASG -
Nasonia vitripennis
Length = 1193
Score = 33.5 bits (73), Expect = 5.4
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHG-RCMIADDMGLGKTYQALAI 710
E+ + K I+ R +L +Q++GV + + +G ++AD+MGLGKT Q +A+
Sbjct: 212 EEKENDKPIENFVQSKYFRGELRDYQKEGVNWLKVLYENGLNGILADEMGLGKTVQIIAL 271
Query: 711 ASY 719
SY
Sbjct: 272 FSY 274
>UniRef50_UPI000050FE1B Cluster: COG0553: Superfamily II DNA/RNA
helicases, SNF2 family; n=1; Brevibacterium linens
BL2|Rep: COG0553: Superfamily II DNA/RNA helicases, SNF2
family - Brevibacterium linens BL2
Length = 1012
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +3
Query: 609 PFQEDGVRFGIARHGRC----MIADDMGLGKTYQALAIASY 719
P+Q G R+ H +C ++ADDMGLGKT Q LA+ ++
Sbjct: 546 PYQVQGFRWLALLH-KCHLGGILADDMGLGKTLQTLALIAH 585
>UniRef50_Q4SS19 Cluster: Chromosome undetermined SCAF14482, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14482,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1919
Score = 33.5 bits (73), Expect = 5.4
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +3
Query: 510 IPPYVLKILKEQTVDPKNIDLMPIESTIRQ--KLLPFQEDGVRF---GIARHGRCMIADD 674
IP K+LK++ P+ + + + I + +L +Q DG+ + + C++AD+
Sbjct: 387 IPSRDCKVLKQR---PRFVPMKKQPAFIDEGLELRDYQLDGLNWMAHSWCKGNSCILADE 443
Query: 675 MGLGKTYQALAIASY 719
MGLGKT Q + +Y
Sbjct: 444 MGLGKTIQTICFLNY 458
>UniRef50_Q6NGZ2 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium diphtheriae|Rep: Putative
uncharacterized protein - Corynebacterium diphtheriae
Length = 884
Score = 33.5 bits (73), Expect = 5.4
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 612 FQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASY 719
+Q G +F I + + ++ D+MGLGKT QA+A A++
Sbjct: 462 YQSFGAKFVIVQR-KVILGDEMGLGKTVQAIAAAAH 496
>UniRef50_Q1NUR8 Cluster: SNF2-related:Helicase-like; n=2; delta
proteobacterium MLMS-1|Rep: SNF2-related:Helicase-like -
delta proteobacterium MLMS-1
Length = 1285
Score = 33.5 bits (73), Expect = 5.4
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRF----GIARHGRCMIADDMGLGKTYQALAI 710
++ L +Q +G R+ G G C+ ADDMGLGKT QALA+
Sbjct: 830 LQTSLRSYQLEGYRWLRQLGELGFGACL-ADDMGLGKTIQALAL 872
>UniRef50_Q15SM4 Cluster: SNF2-related; n=1; Pseudoalteromonas
atlantica T6c|Rep: SNF2-related - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 1437
Score = 33.5 bits (73), Expect = 5.4
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFG--IARHGR-CMIADDMGLGKTYQALAI 710
I ST + +L +Q G + +A G +ADDMGLGKT QALAI
Sbjct: 962 IPSTFQAQLRDYQLVGFDWASRLAHWGAGACLADDMGLGKTLQALAI 1008
>UniRef50_Q08SL4 Cluster: Snf2 family protein; n=2;
Cystobacterineae|Rep: Snf2 family protein - Stigmatella
aurantiaca DW4/3-1
Length = 1130
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +3
Query: 552 DPKNIDLMPIESTIRQKLLPFQEDGVRF--GIARHGRC-MIADDMGLGKTYQALAI 710
D + + + + L +QE G+ + + RHG ++ADDMGLGKT Q+L++
Sbjct: 650 DTAGVPKVALPEGLTATLRHYQESGLSWLWFLHRHGLSGILADDMGLGKTVQSLSL 705
>UniRef50_Q043T7 Cluster: Superfamily II DNA/RNA helicase, SNF2
family; n=1; Lactobacillus gasseri ATCC 33323|Rep:
Superfamily II DNA/RNA helicase, SNF2 family -
Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
Length = 917
Score = 33.5 bits (73), Expect = 5.4
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 654 RCMIADDMGLGKTYQALAIASY 719
R ++ D+MGLGKT QALA+A++
Sbjct: 491 RTLLGDEMGLGKTIQALAVATH 512
>UniRef50_Q02W90 Cluster: Superfamily II DNA/RNA helicase, SNF2
family; n=3; Lactococcus lactis|Rep: Superfamily II
DNA/RNA helicase, SNF2 family - Lactococcus lactis
subsp. cremoris (strain SK11)
Length = 1034
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRF-GIARHGRC--MIADDMGLGKTYQAL 704
I+ L +QE GVR+ + H ++ADDMGLGKT QA+
Sbjct: 586 IKASLRSYQETGVRWMSMLSHYNLGGILADDMGLGKTVQAI 626
>UniRef50_A6L6P6 Cluster: Helicase with SNF2 domain; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Helicase with SNF2
domain - Bacteroides vulgatus (strain ATCC 8482 / DSM
1447 / NCTC 11154)
Length = 762
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIA---RHGRCMIADDMGLGKTYQALA 707
L P+Q DGV + H ++ADDMGLGKT Q LA
Sbjct: 333 LKPYQMDGVMWLSQLRKNHRGGLLADDMGLGKTLQTLA 370
>UniRef50_A5W9C5 Cluster: Non-specific serine/threonine protein
kinase; n=3; Gammaproteobacteria|Rep: Non-specific
serine/threonine protein kinase - Pseudomonas putida F1
Length = 1082
Score = 33.5 bits (73), Expect = 5.4
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIASYY 722
C++ADDMGLGKT Q L +Y
Sbjct: 606 CLLADDMGLGKTIQLLTFLVWY 627
>UniRef50_Q5BN47 Cluster: SPLAYED splice variant; n=8; core
eudicotyledons|Rep: SPLAYED splice variant - Arabidopsis
thaliana (Mouse-ear cress)
Length = 3543
Score = 33.5 bits (73), Expect = 5.4
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +3
Query: 558 KNIDLMPIESTIRQKLLPFQEDGVRFGIA---RHGRCMIADDMGLGKTYQALAIASY 719
+NI+ P S + KL Q +G+R+ ++ H ++AD+MGLGKT Q +++ Y
Sbjct: 740 ENINEQP-SSLVGGKLREEQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICY 795
>UniRef50_A7APE4 Cluster: DNA repair protein rhp16, putative; n=1;
Babesia bovis|Rep: DNA repair protein rhp16, putative -
Babesia bovis
Length = 1289
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 6/42 (14%)
Frame = +3
Query: 603 LLPFQEDGVRF------GIARHGRCMIADDMGLGKTYQALAI 710
LLPFQ+DGV + G R G ++AD+MG+GKT Q + +
Sbjct: 141 LLPFQKDGVAWMQQQEMGPVRGG--ILADEMGMGKTIQTIGL 180
>UniRef50_A3FPW3 Cluster: SNF2 helicase, putative; n=3;
Cryptosporidium|Rep: SNF2 helicase, putative -
Cryptosporidium parvum Iowa II
Length = 1102
Score = 33.5 bits (73), Expect = 5.4
Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHG---RCMIADDMGLGKTYQALAIASYYR 725
L P+Q +G+ + I + ++AD+MGLGKT+Q++++ +Y R
Sbjct: 185 LKPYQLEGLNWLINLYEGGLNGILADEMGLGKTFQSISLLAYLR 228
>UniRef50_A2FYN0 Cluster: SNF2 family N-terminal domain containing
protein; n=1; Trichomonas vaginalis G3|Rep: SNF2 family
N-terminal domain containing protein - Trichomonas
vaginalis G3
Length = 2169
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = +3
Query: 585 STIRQKLLPFQEDGVRFGI----ARHGRCMIADDMGLGKTYQAL 704
ST + L +Q +G+ + + A HG C++AD+MGLGKT Q L
Sbjct: 234 STEGKTLRNYQLEGINWMLSCFCANHG-CILADEMGLGKTIQTL 276
>UniRef50_A2DYG3 Cluster: F/Y-rich N-terminus family protein; n=1;
Trichomonas vaginalis G3|Rep: F/Y-rich N-terminus family
protein - Trichomonas vaginalis G3
Length = 1587
Score = 33.5 bits (73), Expect = 5.4
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIASY 719
C++AD+MGLGKT QA++ +Y
Sbjct: 250 CILADEMGLGKTVQAISFLNY 270
>UniRef50_A2DMS8 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 1421
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = +3
Query: 612 FQEDGVRFGI----ARHGRCMIADDMGLGKTYQALAIASY 719
+Q DG+++ I +HG ++AD+MGLGKT Q L SY
Sbjct: 433 YQVDGIKWLINCWAQKHGS-ILADEMGLGKTIQILGFLSY 471
>UniRef50_A0DRX8 Cluster: Chromosome undetermined scaffold_61, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_61,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 4195
Score = 33.5 bits (73), Expect = 5.4
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 322 YLISEDRFEVNPSEFCAPLINIFKTIPS-RIYAD-KTKLWNFSIEDYNQLMSKV 477
Y I +FEV+ +P +N FK+ P+ +I D K K++NF ++ N+ +++
Sbjct: 544 YFIQLTKFEVSKLHLLSPYLNQFKSQPNKKILEDLKEKIFNFQSKELNEFQNQL 597
>UniRef50_A6SS74 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 104
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 636 GIARHGRCMIADDMGLGKTYQALAIASYYR 725
G R G C++ DDMGLGKT QA + + +
Sbjct: 58 GSVRIGGCILWDDMGLGKTLQACGVICHIK 87
>UniRef50_UPI00015B5C83 Cluster: PREDICTED: similar to
ENSANGP00000008413; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000008413 - Nasonia
vitripennis
Length = 1890
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ ++P++I + + +L +Q+ G+ + HG ++ DDMGLGKT Q L
Sbjct: 1280 EQLLNPRSIPDTELTIPVEAELRSYQQQGLNWLNFLNRYQLHG--VLCDDMGLGKTLQTL 1337
Query: 705 AI 710
I
Sbjct: 1338 CI 1339
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,498,014
Number of Sequences: 1657284
Number of extensions: 14012918
Number of successful extensions: 36470
Number of sequences better than 10.0: 310
Number of HSP's better than 10.0 without gapping: 34981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36424
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -