Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021703
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC089429-1|AAH89429.2| 1079|Homo sapiens zinc finger, RAN-bindin... 69 2e-11
BC043341-1|AAH43341.1| 954|Homo sapiens SWI/SNF related, matrix... 67 7e-11
BC016482-1|AAH16482.1| 954|Homo sapiens SWI/SNF related, matrix... 67 7e-11
AL122076-1|CAB59251.1| 808|Homo sapiens hypothetical protein pr... 67 7e-11
AK000117-1|BAA90955.1| 619|Homo sapiens protein ( Homo sapiens ... 67 7e-11
AF432223-1|AAL73034.1| 954|Homo sapiens SMARCAL1 protein. 67 7e-11
AF210842-1|AAF70454.1| 954|Homo sapiens HARP protein. 67 7e-11
AF082179-1|AAF24984.1| 954|Homo sapiens HepA-related protein HA... 67 7e-11
AC098820-1|AAX93097.1| 954|Homo sapiens unknown protein. 67 7e-11
AL161454-5|CAI16517.1| 712|Homo sapiens chromosome 9 open readi... 38 0.028
BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 38 0.048
BC029930-1|AAH29930.1| 680|Homo sapiens BTAF1 protein protein. 38 0.048
AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 38 0.048
AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 38 0.048
AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor p... 38 0.048
AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 1... 38 0.048
AB208843-1|BAD92080.1| 699|Homo sapiens BTAF1 RNA polymerase II... 38 0.048
BC045534-1|AAH45534.1| 1028|Homo sapiens SWI/SNF-related, matrix... 35 0.34
AY008271-1|AAG16639.1| 1026|Homo sapiens helicase SMARCAD1 protein. 35 0.34
AK027490-1|BAB55150.1| 702|Homo sapiens protein ( Homo sapiens ... 35 0.34
AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein. 35 0.34
AB032948-1|BAA86436.1| 1048|Homo sapiens KIAA1122 protein protein. 35 0.34
EU069463-1|ABU25227.1| 1250|Homo sapiens Plk1-interacting checkp... 34 0.45
BC111486-1|AAI11487.1| 1250|Homo sapiens excision repair cross-c... 34 0.45
BC001965-1|AAH01965.1| 910|Homo sapiens RAD54 homolog B (S. cer... 34 0.45
AF112481-1|AAD34331.1| 910|Homo sapiens RAD54B protein protein. 34 0.45
X97795-1|CAA66379.1| 747|Homo sapiens RAD54 protein. 33 1.4
BC121060-1|AAI21061.1| 747|Homo sapiens RAD54-like (S. cerevisi... 33 1.4
BC121059-1|AAI21060.1| 747|Homo sapiens RAD54-like (S. cerevisi... 33 1.4
AY623117-1|AAT38113.1| 747|Homo sapiens RAD54-like (S. cerevisi... 33 1.4
AL121602-1|CAI22117.1| 747|Homo sapiens RAD54-like (S. cerevisi... 33 1.4
BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase D... 32 2.4
AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein. 32 2.4
X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein. 31 3.2
BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein. 31 3.2
AL035406-11|CAI19894.1| 1195|Homo sapiens chromodomain helicase ... 31 3.2
AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase D... 31 3.2
AL031847-11|CAI19451.1| 1195|Homo sapiens chromodomain helicase ... 31 3.2
AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase ... 31 3.2
AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens ... 31 3.2
AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase D... 31 3.2
AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens ... 31 4.2
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein. 31 4.2
EF560738-1|ABQ59048.1| 900|Homo sapiens CHD1L protein protein. 31 5.6
BC043501-1|AAH43501.1| 890|Homo sapiens Similar to RIKEN cDNA 4... 31 5.6
BC005038-1|AAH05038.1| 789|Homo sapiens CHD1L protein protein. 31 5.6
BC001171-1|AAH01171.1| 896|Homo sapiens Unknown (protein for IM... 31 5.6
AL356378-7|CAH72650.1| 897|Homo sapiens chromodomain helicase D... 31 5.6
AK001342-1|BAA91637.1| 831|Homo sapiens protein ( Homo sapiens ... 31 5.6
AF537213-1|AAO49505.1| 897|Homo sapiens ALC1 protein. 31 5.6
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 30 7.3
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 30 7.3
M89907-1|AAA80560.1| 769|Homo sapiens transcription activator p... 30 7.3
M88163-1|AAA80559.1| 976|Homo sapiens transcription activator p... 30 7.3
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 30 7.3
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 30 7.3
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 30 7.3
BC117447-1|AAI17448.1| 1054|Homo sapiens SWI/SNF related, matrix... 30 7.3
AY034072-1|AAK56405.1| 2713|Homo sapiens chromodomain helicase D... 30 7.3
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 30 7.3
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 30 7.3
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 30 7.3
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 30 7.3
AL138745-3|CAI42614.1| 1005|Homo sapiens SWI/SNF related, matrix... 30 7.3
AL138745-2|CAI42612.1| 1042|Homo sapiens SWI/SNF related, matrix... 30 7.3
AL138745-1|CAI42613.1| 1054|Homo sapiens SWI/SNF related, matrix... 30 7.3
AL121674-2|CAI21744.1| 2715|Homo sapiens chromodomain helicase D... 30 7.3
AL031669-3|CAI22255.1| 2715|Homo sapiens chromodomain helicase D... 30 7.3
AL031667-8|CAI42983.1| 524|Homo sapiens chromodomain helicase D... 30 7.3
AL031667-2|CAI42977.1| 2715|Homo sapiens chromodomain helicase D... 30 7.3
AL022577-3|CAI42684.1| 1005|Homo sapiens SWI/SNF related, matrix... 30 7.3
AL022577-2|CAI42682.1| 1042|Homo sapiens SWI/SNF related, matrix... 30 7.3
AL022577-1|CAI42683.1| 1054|Homo sapiens SWI/SNF related, matrix... 30 7.3
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 30 7.3
AF525085-1|AAN59903.1| 488|Homo sapiens RIGB protein. 30 7.3
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 30 7.3
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 30 7.3
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 30 7.3
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 30 7.3
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 30 7.3
AL139342-2|CAI18867.1| 286|Homo sapiens pecanex-like 2 (Drosoph... 30 9.7
AK021445-1|BAB13826.1| 286|Homo sapiens protein ( Homo sapiens ... 30 9.7
AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein. 30 9.7
>BC089429-1|AAH89429.2| 1079|Homo sapiens zinc finger, RAN-binding
domain containing 3 protein.
Length = 1079
Score = 68.9 bits (161), Expect = 2e-11
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3
Query: 564 IDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
+D +P +R KLLPFQ+DG+ F + R+GRCM+AD+MGLGKT QA+ I +Y+
Sbjct: 26 LDFLP--DRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYK 77
>BC043341-1|AAH43341.1| 954|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 954
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 546 TVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
T D DL ++ + L+PFQ GV F IA+ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 417 TPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYR 476
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 337 DRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPLAPHVVL 504
DRF+V + A LI +FKT+PS+ Y TK WNFS+ DY+ LM K A P V L
Sbjct: 246 DRFQVLIG-YNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALM-KAAQSLPTVNL 299
Score = 45.6 bits (103), Expect = 2e-04
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P V G LIS FE + S + LI +FK + SR Y KT+ W+F +E++++L
Sbjct: 324 SAPSLSFVKGRCMLISRAYFEADIS-YSQDLIALFKQMDSRRYDVKTRKWSFLLEEHSKL 382
Query: 466 MSKVAPLAPHVVL 504
++KV L P V L
Sbjct: 383 IAKVRCL-PQVQL 394
>BC016482-1|AAH16482.1| 954|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 954
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 546 TVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
T D DL ++ + L+PFQ GV F IA+ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 417 TPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYR 476
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 337 DRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPLAPHVVL 504
DRF+V + A LI +FKT+PS+ Y TK WNFS+ DY+ LM K A P V L
Sbjct: 246 DRFQVLIG-YNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALM-KAAQSLPTVNL 299
Score = 44.4 bits (100), Expect = 4e-04
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P V G LIS FE + S + LI +FK + SR Y KT+ W+F ++++++L
Sbjct: 324 SAPSLSFVKGRCMLISRAYFEADIS-YSQDLIALFKQMDSRRYDVKTRKWSFLLQEHSKL 382
Query: 466 MSKVAPLAPHVVL 504
++KV L P V L
Sbjct: 383 IAKVRCL-PQVQL 394
>AL122076-1|CAB59251.1| 808|Homo sapiens hypothetical protein
protein.
Length = 808
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 546 TVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
T D DL ++ + L+PFQ GV F IA+ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 271 TPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYR 330
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 337 DRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPLAPHVVL 504
DRF+V + A LI +FKT+PS+ Y TK WNFS+ DY+ LM K A P V L
Sbjct: 100 DRFQVLIG-YNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALM-KAAQSLPTVNL 153
Score = 45.6 bits (103), Expect = 2e-04
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P V G LIS FE + S + LI +FK + SR Y KT+ W+F +E++++L
Sbjct: 178 SAPSLSFVKGRCMLISRAYFEADIS-YSQDLIALFKQMDSRRYDVKTRKWSFLLEEHSKL 236
Query: 466 MSKVAPLAPHVVL 504
++KV L P V L
Sbjct: 237 IAKVRCL-PQVQL 248
>AK000117-1|BAA90955.1| 619|Homo sapiens protein ( Homo sapiens
cDNA FLJ20110 fis, clone COL05103. ).
Length = 619
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 546 TVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
T D DL ++ + L+PFQ GV F IA+ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 82 TPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYR 141
Score = 38.3 bits (85), Expect = 0.028
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +1
Query: 325 LISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPLAPHVVL 504
LIS F+ + S + LI +FK + SR Y KT+ W+F ++++++L++KV L P V L
Sbjct: 2 LISRAYFKADIS-YSQDLIALFKQMDSRRYDVKTRKWSFLLQEHSKLIAKVRCL-PQVQL 59
>AF432223-1|AAL73034.1| 954|Homo sapiens SMARCAL1 protein.
Length = 954
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 546 TVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
T D DL ++ + L+PFQ GV F IA+ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 417 TPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYR 476
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 337 DRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPLAPHVVL 504
DRF+V + A LI +FKT+PS+ Y TK WNFS+ DY+ LM K A P V L
Sbjct: 246 DRFQVLIG-YNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALM-KAAQSLPTVNL 299
Score = 45.6 bits (103), Expect = 2e-04
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P V G LIS FE + S + LI +FK + SR Y KT+ W+F +E++++L
Sbjct: 324 SAPSLSFVKGRCMLISRAYFEADIS-YSQDLIALFKQMDSRRYDVKTRKWSFLLEEHSKL 382
Query: 466 MSKVAPLAPHVVL 504
++KV L P V L
Sbjct: 383 IAKVRCL-PQVQL 394
>AF210842-1|AAF70454.1| 954|Homo sapiens HARP protein.
Length = 954
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 546 TVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
T D DL ++ + L+PFQ GV F IA+ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 417 TPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYR 476
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 337 DRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPLAPHVVL 504
DRF+V + A LI +FKT+PS+ Y TK WNFS+ DY+ LM K A P V L
Sbjct: 246 DRFQVLIG-YNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALM-KAAQSLPTVNL 299
Score = 45.6 bits (103), Expect = 2e-04
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P V G LIS FE + S + LI +FK + SR Y KT+ W+F +E++++L
Sbjct: 324 SAPSLSFVKGRCMLISRAYFEADIS-YSQDLIALFKQMDSRRYDVKTRKWSFLLEEHSKL 382
Query: 466 MSKVAPLAPHVVL 504
++KV L P V L
Sbjct: 383 IAKVRCL-PQVQL 394
>AF082179-1|AAF24984.1| 954|Homo sapiens HepA-related protein HARP
protein.
Length = 954
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 546 TVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
T D DL ++ + L+PFQ GV F IA+ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 417 TPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYR 476
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 337 DRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPLAPHVVL 504
DRF+V + A LI +FKT+PS+ Y TK WNFS+ DY+ LM K A P V L
Sbjct: 246 DRFQVLIG-YNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALM-KAAQSLPTVNL 299
Score = 44.8 bits (101), Expect = 3e-04
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P V G LIS FE + S + LI +FK + SR Y KT+ W+F +E++++L
Sbjct: 324 SAPSLSFVKGRGMLISRAYFEADIS-YSQDLIALFKQMDSRRYDVKTRKWSFLLEEHSKL 382
Query: 466 MSKVAPLAPHVVL 504
++KV L P V L
Sbjct: 383 IAKVRCL-PQVQL 394
>AC098820-1|AAX93097.1| 954|Homo sapiens unknown protein.
Length = 954
Score = 66.9 bits (156), Expect = 7e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 546 TVDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
T D DL ++ + L+PFQ GV F IA+ GR ++ADDMGLGKT QA+ IA++YR
Sbjct: 417 TPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYR 476
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 337 DRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQLMSKVAPLAPHVVL 504
DRF+V + A LI +FKT+PS+ Y TK WNFS+ DY+ LM K A P V L
Sbjct: 246 DRFQVLIG-YNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALM-KAAQSLPTVNL 299
Score = 45.6 bits (103), Expect = 2e-04
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 286 NVPVTKVVTGNVYLISEDRFEVNPSEFCAPLINIFKTIPSRIYADKTKLWNFSIEDYNQL 465
+ P V G LIS FE + S + LI +FK + SR Y KT+ W+F +E++++L
Sbjct: 324 SAPSLSFVKGRCMLISRAYFEADIS-YSQDLIALFKQMDSRRYDVKTRKWSFLLEEHSKL 382
Query: 466 MSKVAPLAPHVVL 504
++KV L P V L
Sbjct: 383 IAKVRCL-PQVQL 394
>AL161454-5|CAI16517.1| 712|Homo sapiens chromosome 9 open reading
frame 102 protein.
Length = 712
Score = 38.3 bits (85), Expect = 0.028
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARH---GRCMIADDMGLGKTYQALA 707
I TI + L +Q +G RF + G C++ DDMGLGKT Q ++
Sbjct: 126 IPYTINRYLRDYQREGTRFLYGHYIHGGGCILGDDMGLGKTVQVIS 171
>BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa protein.
Length = 1849
Score = 37.5 bits (83), Expect = 0.048
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D K ++ I I +L +Q+DGV + HG ++ DDMGLGKT Q++
Sbjct: 1245 EQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQSI 1302
Query: 705 AI 710
I
Sbjct: 1303 CI 1304
>BC029930-1|AAH29930.1| 680|Homo sapiens BTAF1 protein protein.
Length = 680
Score = 37.5 bits (83), Expect = 0.048
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D K ++ I I +L +Q+DGV + HG ++ DDMGLGKT Q++
Sbjct: 76 EQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQSI 133
Query: 705 AI 710
I
Sbjct: 134 CI 135
>AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 37.5 bits (83), Expect = 0.048
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D K ++ I I +L +Q+DGV + HG ++ DDMGLGKT Q++
Sbjct: 1245 EQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQSI 1302
Query: 705 AI 710
I
Sbjct: 1303 CI 1304
>AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 37.5 bits (83), Expect = 0.048
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D K ++ I I +L +Q+DGV + HG ++ DDMGLGKT Q++
Sbjct: 1245 EQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQSI 1302
Query: 705 AI 710
I
Sbjct: 1303 CI 1304
>AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor
protein.
Length = 1849
Score = 37.5 bits (83), Expect = 0.048
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D K ++ I I +L +Q+DGV + HG ++ DDMGLGKT Q++
Sbjct: 1245 EQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQSI 1302
Query: 705 AI 710
I
Sbjct: 1303 CI 1304
>AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 172
protein.
Length = 1849
Score = 37.5 bits (83), Expect = 0.048
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D K ++ I I +L +Q+DGV + HG ++ DDMGLGKT Q++
Sbjct: 1245 EQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQSI 1302
Query: 705 AI 710
I
Sbjct: 1303 CI 1304
>AB208843-1|BAD92080.1| 699|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa varian
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.048
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 540 EQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-----GIARHGRCMIADDMGLGKTYQAL 704
EQ +D K ++ I I +L +Q+DGV + HG ++ DDMGLGKT Q++
Sbjct: 95 EQLLDGKKLENYKIPVPINAELRKYQQDGVNWLAFLNKYKLHG--ILCDDMGLGKTLQSI 152
Query: 705 AI 710
I
Sbjct: 153 CI 154
>BC045534-1|AAH45534.1| 1028|Homo sapiens SWI/SNF-related,
matrix-associated actin-dependent regulator of
chromatin, subf protein.
Length = 1028
Score = 34.7 bits (76), Expect = 0.34
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFG--IARHG-RCMIADDMGLGKTYQALAIASY 719
L P+Q+ G+ + + +HG ++AD+MGLGKT QA+A +Y
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY 538
>AY008271-1|AAG16639.1| 1026|Homo sapiens helicase SMARCAD1 protein.
Length = 1026
Score = 34.7 bits (76), Expect = 0.34
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFG--IARHG-RCMIADDMGLGKTYQALAIASY 719
L P+Q+ G+ + + +HG ++AD+MGLGKT QA+A +Y
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY 538
>AK027490-1|BAB55150.1| 702|Homo sapiens protein ( Homo sapiens
cDNA FLJ14584 fis, clone NT2RM4001592. ).
Length = 702
Score = 34.7 bits (76), Expect = 0.34
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFG--IARHG-RCMIADDMGLGKTYQALAIASY 719
L P+Q+ G+ + + +HG ++AD+MGLGKT QA+A +Y
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY 538
>AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein.
Length = 2432
Score = 34.7 bits (76), Expect = 0.34
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 516 PYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVR---FGIARHGRCMIADDMGLG 686
P + ++ + Q K ++L E R +L +Q +GV F C++AD+MGLG
Sbjct: 634 PELKRVNRPQASAWKKLELSH-EYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG 692
Query: 687 KTYQALA 707
KT Q++A
Sbjct: 693 KTIQSIA 699
>AB032948-1|BAA86436.1| 1048|Homo sapiens KIAA1122 protein protein.
Length = 1048
Score = 34.7 bits (76), Expect = 0.34
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFG--IARHG-RCMIADDMGLGKTYQALAIASY 719
L P+Q+ G+ + + +HG ++AD+MGLGKT QA+A +Y
Sbjct: 517 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY 558
>EU069463-1|ABU25227.1| 1250|Homo sapiens Plk1-interacting
checkpoint helicase protein.
Length = 1250
Score = 34.3 bits (75), Expect = 0.45
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRF--GIARHGRC--MIADDMGLGKTYQALAIAS 716
+ +L Q++G+ F + R GR ++ADDMGLGKT Q +A S
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLS 137
>BC111486-1|AAI11487.1| 1250|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1250
Score = 34.3 bits (75), Expect = 0.45
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +3
Query: 591 IRQKLLPFQEDGVRF--GIARHGRC--MIADDMGLGKTYQALAIAS 716
+ +L Q++G+ F + R GR ++ADDMGLGKT Q +A S
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLS 137
>BC001965-1|AAH01965.1| 910|Homo sapiens RAD54 homolog B (S.
cerevisiae) protein.
Length = 910
Score = 34.3 bits (75), Expect = 0.45
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 8/44 (18%)
Frame = +3
Query: 603 LLPFQEDGVRF------GIARHGRC--MIADDMGLGKTYQALAI 710
L P Q++G+ F G+ +GRC ++AD+MGLGKT Q +++
Sbjct: 296 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISL 339
>AF112481-1|AAD34331.1| 910|Homo sapiens RAD54B protein protein.
Length = 910
Score = 34.3 bits (75), Expect = 0.45
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 8/44 (18%)
Frame = +3
Query: 603 LLPFQEDGVRF------GIARHGRC--MIADDMGLGKTYQALAI 710
L P Q++G+ F G+ +GRC ++AD+MGLGKT Q +++
Sbjct: 296 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISL 339
>X97795-1|CAA66379.1| 747|Homo sapiens RAD54 protein.
Length = 747
Score = 32.7 bits (71), Expect = 1.4
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--------GIARHGRCMIADDMG 680
LK+ KE+ P ++ + PI S + L P Q +GV+F I C++AD+MG
Sbjct: 132 LKLDKEKL--PVHVVVDPILSKV---LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMG 186
Query: 681 LGKTYQALAI 710
LGKT Q + +
Sbjct: 187 LGKTLQCITL 196
>BC121060-1|AAI21061.1| 747|Homo sapiens RAD54-like (S. cerevisiae)
protein.
Length = 747
Score = 32.7 bits (71), Expect = 1.4
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--------GIARHGRCMIADDMG 680
LK+ KE+ P ++ + PI S + L P Q +GV+F I C++AD+MG
Sbjct: 132 LKLDKEKL--PVHVVVDPILSKV---LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMG 186
Query: 681 LGKTYQALAI 710
LGKT Q + +
Sbjct: 187 LGKTLQCITL 196
>BC121059-1|AAI21060.1| 747|Homo sapiens RAD54-like (S. cerevisiae)
protein.
Length = 747
Score = 32.7 bits (71), Expect = 1.4
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--------GIARHGRCMIADDMG 680
LK+ KE+ P ++ + PI S + L P Q +GV+F I C++AD+MG
Sbjct: 132 LKLDKEKL--PVHVVVDPILSKV---LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMG 186
Query: 681 LGKTYQALAI 710
LGKT Q + +
Sbjct: 187 LGKTLQCITL 196
>AY623117-1|AAT38113.1| 747|Homo sapiens RAD54-like (S. cerevisiae)
protein.
Length = 747
Score = 32.7 bits (71), Expect = 1.4
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--------GIARHGRCMIADDMG 680
LK+ KE+ P ++ + PI S + L P Q +GV+F I C++AD+MG
Sbjct: 132 LKLDKEKL--PVHVVVDPILSKV---LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMG 186
Query: 681 LGKTYQALAI 710
LGKT Q + +
Sbjct: 187 LGKTLQCITL 196
>AL121602-1|CAI22117.1| 747|Homo sapiens RAD54-like (S. cerevisiae)
protein.
Length = 747
Score = 32.7 bits (71), Expect = 1.4
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +3
Query: 525 LKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF--------GIARHGRCMIADDMG 680
LK+ KE+ P ++ + PI S + L P Q +GV+F I C++AD+MG
Sbjct: 132 LKLDKEKL--PVHVVVDPILSKV---LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMG 186
Query: 681 LGKTYQALAI 710
LGKT Q + +
Sbjct: 187 LGKTLQCITL 196
>BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase DNA
binding protein 1 protein.
Length = 1709
Score = 31.9 bits (69), Expect = 2.4
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIASY 719
C++AD+MGLGKT Q ++ +Y
Sbjct: 502 CILADEMGLGKTIQTISFLNY 522
>AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein.
Length = 1709
Score = 31.9 bits (69), Expect = 2.4
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIASY 719
C++AD+MGLGKT Q ++ +Y
Sbjct: 502 CILADEMGLGKTIQTISFLNY 522
>X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein.
Length = 1912
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +3
Query: 603 LLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQ-ALAIASYYR 725
L P+Q +G+ RF A+ ++AD+MGLGKT Q A+ + S Y+
Sbjct: 726 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 770
>BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.
Length = 1937
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +3
Query: 603 LLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQ-ALAIASYYR 725
L P+Q +G+ RF A+ ++AD+MGLGKT Q A+ + S Y+
Sbjct: 723 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 767
>AL035406-11|CAI19894.1| 1195|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1195
Score = 31.5 bits (68), Expect = 3.2
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +3
Query: 549 VDPK-NIDLMP--IESTIRQKLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQALA- 707
VDP D P I+ST L P+Q +G+ RF A+ ++AD+MGLGKT Q +
Sbjct: 196 VDPTVKFDKQPWYIDST-GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF 254
Query: 708 IASYYR 725
+ S Y+
Sbjct: 255 LYSLYK 260
>AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 31.5 bits (68), Expect = 3.2
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +3
Query: 549 VDPK-NIDLMP--IESTIRQKLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQALA- 707
VDP D P I+ST L P+Q +G+ RF A+ ++AD+MGLGKT Q +
Sbjct: 680 VDPTVKFDKQPWYIDST-GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF 738
Query: 708 IASYYR 725
+ S Y+
Sbjct: 739 LYSLYK 744
>AL031847-11|CAI19451.1| 1195|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1195
Score = 31.5 bits (68), Expect = 3.2
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +3
Query: 549 VDPK-NIDLMP--IESTIRQKLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQALA- 707
VDP D P I+ST L P+Q +G+ RF A+ ++AD+MGLGKT Q +
Sbjct: 196 VDPTVKFDKQPWYIDST-GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF 254
Query: 708 IASYYR 725
+ S Y+
Sbjct: 255 LYSLYK 260
>AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 31.5 bits (68), Expect = 3.2
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +3
Query: 549 VDPK-NIDLMP--IESTIRQKLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQALA- 707
VDP D P I+ST L P+Q +G+ RF A+ ++AD+MGLGKT Q +
Sbjct: 680 VDPTVKFDKQPWYIDST-GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF 738
Query: 708 IASYYR 725
+ S Y+
Sbjct: 739 LYSLYK 744
>AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens
cDNA FLJ45103 fis, clone BRAWH3032571, moderately
similar to Chromodomain helicase-DNA-binding protein 4.
).
Length = 1225
Score = 31.5 bits (68), Expect = 3.2
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +3
Query: 549 VDPK-NIDLMP--IESTIRQKLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQALA- 707
VDP D P I+ST L P+Q +G+ RF A+ ++AD+MGLGKT Q +
Sbjct: 680 VDPTVKFDKQPWYIDST-GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF 738
Query: 708 IASYYR 725
+ S Y+
Sbjct: 739 LYSLYK 744
>AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 31.5 bits (68), Expect = 3.2
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +3
Query: 549 VDPK-NIDLMP--IESTIRQKLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQALA- 707
VDP D P I+ST L P+Q +G+ RF A+ ++AD+MGLGKT Q +
Sbjct: 680 VDPTVKFDKQPWYIDST-GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF 738
Query: 708 IASYYR 725
+ S Y+
Sbjct: 739 LYSLYK 744
>AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ20361 fis, clone HEP16789. ).
Length = 251
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +3
Query: 600 KLLPFQEDGVR---FGIARHGRCMIADDMGLGKTYQAL 704
KL +Q +GV F C++AD+MGLGKT Q++
Sbjct: 80 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSI 117
>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
Length = 1967
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +3
Query: 600 KLLPFQEDGVR---FGIARHGRCMIADDMGLGKTYQAL 704
KL +Q +GV F C++AD+MGLGKT Q++
Sbjct: 205 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSI 242
>EF560738-1|ABQ59048.1| 900|Homo sapiens CHD1L protein protein.
Length = 900
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASY 719
L +Q +GV + R C++ D+MGLGKT Q +A+ Y
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIY 87
>BC043501-1|AAH43501.1| 890|Homo sapiens Similar to RIKEN cDNA
4432404A22 gene protein.
Length = 890
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASY 719
L +Q +GV + R C++ D+MGLGKT Q +A+ Y
Sbjct: 39 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIY 80
>BC005038-1|AAH05038.1| 789|Homo sapiens CHD1L protein protein.
Length = 789
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASY 719
L +Q +GV + R C++ D+MGLGKT Q +A+ Y
Sbjct: 32 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIY 73
>BC001171-1|AAH01171.1| 896|Homo sapiens Unknown (protein for
IMAGE:3355762) protein.
Length = 896
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASY 719
L +Q +GV + R C++ D+MGLGKT Q +A+ Y
Sbjct: 45 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIY 86
>AL356378-7|CAH72650.1| 897|Homo sapiens chromodomain helicase DNA
binding protein 1-like protein.
Length = 897
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASY 719
L +Q +GV + R C++ D+MGLGKT Q +A+ Y
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIY 87
>AK001342-1|BAA91637.1| 831|Homo sapiens protein ( Homo sapiens
cDNA FLJ10480 fis, clone NT2RP2000126, weakly similar to
POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L. ).
Length = 831
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASY 719
L +Q +GV + R C++ D+MGLGKT Q +A+ Y
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIY 87
>AF537213-1|AAO49505.1| 897|Homo sapiens ALC1 protein.
Length = 897
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIAR---HGRCMIADDMGLGKTYQALAIASY 719
L +Q +GV + R C++ D+MGLGKT Q +A+ Y
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIY 87
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 742 ILADEMGLGKTIQTIALITY 761
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 776 ILADEMGLGKTIQTIALITY 795
>M89907-1|AAA80560.1| 769|Homo sapiens transcription activator
protein.
Length = 769
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +A+ Y +
Sbjct: 205 ILADEMGLGKTLQTIALLGYLK 226
>M88163-1|AAA80559.1| 976|Homo sapiens transcription activator
protein.
Length = 976
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +A+ Y +
Sbjct: 127 ILADEMGLGKTLQTIALLGYLK 148
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 776 ILADEMGLGKTIQTIALITY 795
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 746 ILADEMGLGKTIQTIALITY 765
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 776 ILADEMGLGKTIQTIALITY 795
>BC117447-1|AAI17448.1| 1054|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1054
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +A+ Y +
Sbjct: 205 ILADEMGLGKTLQTIALLGYLK 226
>AY034072-1|AAK56405.1| 2713|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 2713
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIAS 716
C++AD+MGLGKT Q++ S
Sbjct: 480 CILADEMGLGKTIQSITFLS 499
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 746 ILADEMGLGKTIQTIALITY 765
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 746 ILADEMGLGKTIQTIALITY 765
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 746 ILADEMGLGKTIQTIALITY 765
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 746 ILADEMGLGKTIQTIALITY 765
>AL138745-3|CAI42614.1| 1005|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1005
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +A+ Y +
Sbjct: 184 ILADEMGLGKTLQTIALLGYLK 205
>AL138745-2|CAI42612.1| 1042|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1042
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +A+ Y +
Sbjct: 205 ILADEMGLGKTLQTIALLGYLK 226
>AL138745-1|CAI42613.1| 1054|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1054
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +A+ Y +
Sbjct: 205 ILADEMGLGKTLQTIALLGYLK 226
>AL121674-2|CAI21744.1| 2715|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 2715
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIAS 716
C++AD+MGLGKT Q++ S
Sbjct: 482 CILADEMGLGKTIQSITFLS 501
>AL031669-3|CAI22255.1| 2715|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 2715
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIAS 716
C++AD+MGLGKT Q++ S
Sbjct: 482 CILADEMGLGKTIQSITFLS 501
>AL031667-8|CAI42983.1| 524|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 524
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIAS 716
C++AD+MGLGKT Q++ S
Sbjct: 184 CILADEMGLGKTIQSITFLS 203
>AL031667-2|CAI42977.1| 2715|Homo sapiens chromodomain helicase DNA
binding protein 6 protein.
Length = 2715
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIAS 716
C++AD+MGLGKT Q++ S
Sbjct: 482 CILADEMGLGKTIQSITFLS 501
>AL022577-3|CAI42684.1| 1005|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1005
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +A+ Y +
Sbjct: 184 ILADEMGLGKTLQTIALLGYLK 205
>AL022577-2|CAI42682.1| 1042|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1042
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +A+ Y +
Sbjct: 205 ILADEMGLGKTLQTIALLGYLK 226
>AL022577-1|CAI42683.1| 1054|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1054
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +A+ Y +
Sbjct: 205 ILADEMGLGKTLQTIALLGYLK 226
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens
cDNA FLJ46149 fis, clone TESTI4000621, moderately
similar to Homo sapiens Snf2-related CBP activator
protein (SRCAP). ).
Length = 2427
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +3
Query: 576 PIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
PI +R +L +Q G+ + + + + + +AD+MGLGKT Q +++ ++
Sbjct: 609 PIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAH 659
>AF525085-1|AAN59903.1| 488|Homo sapiens RIGB protein.
Length = 488
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIAS 716
C++AD+MGLGKT Q++ S
Sbjct: 148 CILADEMGLGKTIQSITFLS 167
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 776 ILADEMGLGKTIQTIALITY 795
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 776 ILADEMGLGKTIQTIALITY 795
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +3
Query: 576 PIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
PI +R +L +Q G+ + + + + + +AD+MGLGKT Q +++ ++
Sbjct: 412 PIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAH 462
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASY 719
++AD+MGLGKT Q +A+ +Y
Sbjct: 733 ILADEMGLGKTIQTIALITY 752
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +3
Query: 576 PIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
PI +R +L +Q G+ + + + + + +AD+MGLGKT Q +++ ++
Sbjct: 590 PIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAH 640
>AL139342-2|CAI18867.1| 286|Homo sapiens pecanex-like 2
(Drosophila) protein.
Length = 286
Score = 29.9 bits (64), Expect = 9.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 527 KDIERANSGSKEHRFNANRVYNQTKIIAISGRWCQIWH 640
+D+E ++ S + +FN + Y K I G+W ++W+
Sbjct: 89 QDLEASSCSSTQGKFNREQFY---KFIIFPGKWIKVWY 123
>AK021445-1|BAB13826.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ11383 fis, clone HEMBA1000518, weakly similar to
PECANEX PROTEIN. ).
Length = 286
Score = 29.9 bits (64), Expect = 9.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 527 KDIERANSGSKEHRFNANRVYNQTKIIAISGRWCQIWH 640
+D+E ++ S + +FN + Y K I G+W ++W+
Sbjct: 89 QDLEASSCSSTQGKFNREQFY---KFIIFPGKWIKVWY 123
>AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein.
Length = 1739
Score = 29.9 bits (64), Expect = 9.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 645 RHGRCMIADDMGLGKTYQALAIASY 719
++ ++AD+MGLGKT Q ++ SY
Sbjct: 501 KNNSVILADEMGLGKTIQTISFLSY 525
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,712,639
Number of Sequences: 237096
Number of extensions: 2156257
Number of successful extensions: 8078
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 7861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8078
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -