Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021703
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 58 6e-09
U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical p... 58 6e-09
U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical pr... 58 6e-09
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 40 0.002
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 36 0.022
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 33 0.16
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 33 0.16
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 32 0.36
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 31 0.63
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 31 0.63
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 1.9
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 30 1.9
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 30 1.9
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 30 1.9
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 29 2.6
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 29 3.4
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 29 3.4
U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw (imit... 29 4.5
Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical pr... 28 5.9
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 5.9
L23651-3|AAY44021.1| 136|Caenorhabditis elegans Temporarily ass... 28 5.9
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 5.9
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 58.0 bits (134), Expect = 6e-09
Identities = 23/49 (46%), Positives = 38/49 (77%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
++ ++ ++L P+Q++GV F + R GR ++AD+MGLGK+ QAL IA YY+
Sbjct: 188 MDPSLIERLFPYQKEGVIFALERDGRILLADEMGLGKSVQALTIARYYK 236
>U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical
protein C16A3.1a protein.
Length = 687
Score = 58.0 bits (134), Expect = 6e-09
Identities = 23/49 (46%), Positives = 38/49 (77%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
++ ++ ++L P+Q++GV F + R GR ++AD+MGLGK+ QAL IA YY+
Sbjct: 189 MDPSLIERLFPYQKEGVIFALERDGRILLADEMGLGKSVQALTIARYYK 237
>U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical
protein C16A3.1c protein.
Length = 690
Score = 58.0 bits (134), Expect = 6e-09
Identities = 23/49 (46%), Positives = 38/49 (77%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRFGIARHGRCMIADDMGLGKTYQALAIASYYR 725
++ ++ ++L P+Q++GV F + R GR ++AD+MGLGK+ QAL IA YY+
Sbjct: 192 MDPSLIERLFPYQKEGVIFALERDGRILLADEMGLGKSVQALTIARYYK 240
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Frame = +3
Query: 510 IPPYVLKILKEQTVDPKNIDLMPIESTIRQKLLPFQEDGVRF-------GIARHGR---C 659
IPP++L ++ +D K + +++ + L P Q+ G++F G ++G
Sbjct: 177 IPPFILN--EQDILDRKTTSAVTVDTRFARHLRPHQKSGIQFIFDRLRRGSGKNGGGGGA 234
Query: 660 MIADDMGLGKTYQALA 707
++ADDMGLGK+ Q +A
Sbjct: 235 ILADDMGLGKSLQTMA 250
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
protein T23H2.3 protein.
Length = 1009
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +3
Query: 555 PKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRC----MIADDMGLGKTYQALAI 710
P DL + +L+P Q+ G+R+ + R G+ ++ADDMGLGKT L++
Sbjct: 356 PAETDLTDTPDGLLVELMPHQKAGLRWLVWREGQPHSGGILADDMGLGKTLSMLSL 411
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Frame = +3
Query: 603 LLPFQEDGVRF--------GIARHGRCMIADDMGLGKTYQALAI 710
L P Q DGV+F I C++AD+MGLGKT Q +++
Sbjct: 202 LRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTLQCISL 245
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Frame = +3
Query: 603 LLPFQEDGVRF--------GIARHGRCMIADDMGLGKTYQALAI 710
L P Q DGV+F I C++AD+MGLGKT Q +++
Sbjct: 202 LRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTLQCISL 245
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +3
Query: 600 KLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
KL P+Q G+ + ++ + +AD+MGLGKT Q +A +Y
Sbjct: 365 KLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITY 407
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
L P+Q G+ + ++ + + +AD+MGLGKT Q +++ +Y
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTY 574
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
L P+Q G+ + ++ + + +AD+MGLGKT Q +++ +Y
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTY 574
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 603 LLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
L P+Q G+ + ++ + + +AD+MGLGKT Q +++ +Y
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTY 574
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +3
Query: 567 DLMPIESTIRQKLLPFQEDGVRFGI---ARHGRCMIADDMGLGKTYQALAI 710
D + + KL +Q +G+ + + + ++AD+MGLGKT Q++++
Sbjct: 393 DFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISL 443
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +3
Query: 576 PIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
P+ IR +L +Q G+ + + + + + +AD+MGLGKT Q +++ ++
Sbjct: 549 PVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAH 599
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +3
Query: 576 PIESTIRQKLLPFQEDGVRFGIARHGRCM---IADDMGLGKTYQALAIASY 719
P+ IR +L +Q G+ + + + + + +AD+MGLGKT Q +++ ++
Sbjct: 549 PVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAH 599
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 657 CMIADDMGLGKTYQALAIAS 716
C++AD+MGLGKT Q + S
Sbjct: 1208 CILADEMGLGKTVQTITFLS 1227
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 612 FQEDGVRFGIARHGR---CMIADDMGLGKTYQALAIASYYR 725
+Q GV++ I + + ++ D+MGLGKT Q +A SY +
Sbjct: 397 YQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLK 437
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 612 FQEDGVRFGIARHGR---CMIADDMGLGKTYQALAIASYYR 725
+Q GV++ I + + ++ D+MGLGKT Q +A SY +
Sbjct: 397 YQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLK 437
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +3
Query: 522 VLKILKEQT-VDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRC----MIADDMGLG 686
V++ L E T P +L + +L+P Q+ G+ + R + ++ADDMGLG
Sbjct: 443 VVRQLAEATHTIPDETELTDTPKGFKLELMPHQKAGLTWMRWRETQPQPGGILADDMGLG 502
Query: 687 KTYQALAIASYYR 725
KT +++ ++ +
Sbjct: 503 KTLSMISLIAHQK 515
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +3
Query: 522 VLKILKEQT-VDPKNIDLMPIESTIRQKLLPFQEDGVRFGIARHGRC----MIADDMGLG 686
V++ L E T P +L + +L+P Q+ G+ + R + ++ADDMGLG
Sbjct: 443 VVRQLAEATHTIPDETELTDTPKGFKLELMPHQKAGLTWMRWRETQPQPGGILADDMGLG 502
Query: 687 KTYQALAIASYYR 725
KT +++ ++ +
Sbjct: 503 KTLSMISLIAHQK 515
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT QAL++ + R
Sbjct: 299 ILADEMGLGKTIQALSLIATNR 320
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT QAL++ + R
Sbjct: 299 ILADEMGLGKTIQALSLIATNR 320
>U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw
(imitation swi) homologprotein 1 protein.
Length = 1009
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 660 MIADDMGLGKTYQALAIASYYR 725
++AD+MGLGKT Q +++ Y +
Sbjct: 154 ILADEMGLGKTLQTISMIGYMK 175
>Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical
protein F53H4.1 protein.
Length = 957
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +3
Query: 579 IESTIRQKLLPFQEDGVRF---GIARHGRCMIADDMGLGKTYQAL 704
+ + + KL FQ++GV + ++AD+MGLGKT Q++
Sbjct: 186 VNAGVWNKLHKFQQEGVEWLQKKTDHRSGGILADEMGLGKTIQSV 230
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +3
Query: 600 KLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQAL 704
KL P+Q +G+ R + ++AD+MGLGKT Q+L
Sbjct: 601 KLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSL 638
>L23651-3|AAY44021.1| 136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 250, isoform b protein.
Length = 136
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 92 DTFKMLCSKEEIEKKRLSALHKRQNKISNTST---SPLNKLNRKTCPLRDN 235
D + + + EE E + + ++SNTS+ P+N +N + CP+R N
Sbjct: 70 DWIQQVTAAEEFEAQTRGPITILFVRLSNTSSFKRPPINSVNVRACPIRIN 120
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +3
Query: 600 KLLPFQEDGV---RFGIARHGRCMIADDMGLGKTYQAL 704
KL P+Q +G+ R + ++AD+MGLGKT Q+L
Sbjct: 601 KLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSL 638
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,787,538
Number of Sequences: 27780
Number of extensions: 359338
Number of successful extensions: 992
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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