Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021702
         (764 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   7.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.5  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 573 QPIVVDWVTRSSSRQR 620
           QPI   W+TRS +R++
Sbjct: 81  QPISYKWITRSGTREQ 96


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 524 IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRIND--ISSESLQLFAS 664
           +I L  Q+   + +H ++  R L +S+F   +R+N   +S   L LF S
Sbjct: 294 MICLNGQVLKRESIHNSSNARFLMDSMFDFAERVNSLRLSDAELGLFCS 342


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +2

Query: 29  ILPKVSKNLRKWHPKLSSPPL 91
           +LPK++  + +W+P   + P+
Sbjct: 519 VLPKLTLEVEEWNPLTDTVPI 539


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 224 SQSPSKLALVRTTSRIGIVACTTISCWTNYQ 316
           +QS +K         +G+V  + + CW  +Q
Sbjct: 302 TQSLAKAVSKNGVLFVGLVGNSAVGCWNEHQ 332


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 51  TYENGIQNSRRPLYSS 98
           TY NG+   +RP++S+
Sbjct: 300 TYSNGLPFPQRPIWSN 315


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 51  TYENGIQNSRRPLYSS 98
           TY NG+   +RP++S+
Sbjct: 300 TYSNGLPFPQRPIWSN 315


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 224 SQSPSKLALVRTTSRIGIVACTTISCWTNYQ 316
           +QS +K+         G+V  + I CW  +Q
Sbjct: 305 TQSSAKVMSKNGVLFFGLVNNSAIGCWNEHQ 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,788
Number of Sequences: 438
Number of extensions: 4109
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)