Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021701
(746 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_40708| Best HMM Match : SRCR (HMM E-Value=0) 30 2.3
SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024) 30 2.3
SB_54032| Best HMM Match : Peptidase_A17 (HMM E-Value=5.20022e-42) 29 3.0
SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6) 29 4.0
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 29 5.3
SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04) 29 5.3
SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3) 28 7.0
SB_11191| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_51937| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 28 9.2
SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39) 28 9.2
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 28 9.2
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 28 9.2
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 28 9.2
SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 9.2
SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 28 9.2
SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05) 28 9.2
SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 28 9.2
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 28 9.2
SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 9.2
SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 28 9.2
SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 28 9.2
SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05) 28 9.2
SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) 28 9.2
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 713 QSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCAD 591
+SP C RC GH + CT+ +C CG H+R C +
Sbjct: 117 ESPGESCYRCGKSGHFARDCTDDT-KCYKCGNTGHIRRDCPE 157
>SB_40708| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1976
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 692 TRCLAFGHGRKFCTESVDRCSHCGGPHLR--EKC-ADFIAGTEP 570
T+CL C ES +C+ C P+ R KC AD AG +P
Sbjct: 585 TKCLKCDSNCAICEESSTKCTSCQPPNFRLGNKCQADCGAGYKP 628
>SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1322
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 701 IQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKC 597
++C C GH R C RC CGG H + C
Sbjct: 526 LRCFNCSESGHTRAACYMD-QRCMLCGGSHEVDDC 559
>SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024)
Length = 90
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 701 IQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKC 597
++C C GH R C RC CGG H + C
Sbjct: 18 LRCFNCSESGHTRAACYMD-QRCMLCGGSHEVDDC 51
>SB_54032| Best HMM Match : Peptidase_A17 (HMM E-Value=5.20022e-42)
Length = 832
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 695 CTRCLAFGHGRKFCTESVDRCSHCGGPHLREKC 597
C CL+ H CT RC CGG H C
Sbjct: 103 CYNCLSSSHISSKCTSKF-RCRQCGGKHHTTIC 134
>SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 478
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -1
Query: 713 QSPLIQCTRC--LAFGHGRKFCTE-SVDRCSHCGGPHLREKCADFIAGTEPQCCNC 555
QS L +C+RC L+ G G T+ S+ RCS C + I G+ +C C
Sbjct: 410 QSSLARCSRCLLLSIGSGGMVLTQSSLARCSRCLLLSIGSGGMLLIQGSLARCSRC 465
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = -1
Query: 713 QSPLIQCTRC--LAFGHGRKFCTE-SVDRCSHC 624
QS L +C+RC L+ G G T+ S+ RCS C
Sbjct: 387 QSSLARCSRCLLLSIGSGSMVLTQSSLARCSRC 419
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = -1
Query: 713 QSPLIQCTRC--LAFGHGRKFCTE-SVDRCSHC 624
QS L +C+RC L+ G G T+ S+ RCS C
Sbjct: 341 QSSLARCSRCLVLSLGSGGMVLTQSSLARCSRC 373
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = -1
Query: 713 QSPLIQCTRC--LAFGHGRKFCTE-SVDRCSHC 624
QS L +C+RC L+ G G T+ S+ RCS C
Sbjct: 364 QSSLARCSRCLVLSIGSGGMVLTQSSLARCSRC 396
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 713 QSPLIQCTRC--LAFGHGRKFCTE-SVDRCSHC 624
QS L C+RC L+ G G T+ S+ RCS C
Sbjct: 318 QSSLAHCSRCLVLSLGSGGMVLTQSSLARCSRC 350
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 674 GHGRKFCTESVDRCSHCGGPH-LREKCAD 591
GH +K C S + CG P+ L+EKC +
Sbjct: 42 GHCKKTCNTSCTTSNDCGSPNSLQEKCCN 70
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = +1
Query: 457 ICCVSASQVIPLFSYRASALKALWSAFRNPECEQLQHCGSVPAMKSAHFSRRCGPPQ*LH 636
+ C + Q + FS + K FR CE+ HC S P A + G P+ +
Sbjct: 325 VYCSNHGQCVTNFSMSSYQCKCC-GGFRGEFCEKEDHCFSKPCKNGATCKNKEGDPRHFY 383
Query: 637 LST 645
T
Sbjct: 384 TCT 386
>SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04)
Length = 1223
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 5/66 (7%)
Frame = -1
Query: 611 LREKCADFIAGTE-----PQCCNCSHSGLRKADHNAFSADARYEKSGITWLALTQHMHNL 447
L KC ++ GT PQCC +H R+EK T+H H L
Sbjct: 259 LNPKCHEYCHGTPAVCYCPQCCAVFCESCYNLEHQGNERKRRHEKQSKLRPICTEHRHPL 318
Query: 446 NAGHYT 429
+T
Sbjct: 319 EFFDFT 324
>SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3)
Length = 374
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -1
Query: 635 CSHCGGPHLREKCADFIAGTEPQC--CNCSHSGLRKADHNA 519
C C G H R+ C + T P+C CN +H L D +A
Sbjct: 148 CFKCTGKHFRKDCEE----TPPRCEACNKNHLTLLHEDRSA 184
>SB_11191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1577
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/40 (30%), Positives = 15/40 (37%)
Frame = -1
Query: 698 QCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADFIAG 579
+C RCL H C C C G H C + +G
Sbjct: 357 RCFRCLRKNHRSYECKSKDSNCKGCAGAHHLSICENQASG 396
>SB_51937| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 151
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 105 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 142
>SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39)
Length = 1311
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 105 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 142
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 207 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 244
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 350 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 387
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 876 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 913
>SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 794
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 342 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 379
>SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 422 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKMGHLKRVC 459
>SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 296
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 207 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 244
>SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05)
Length = 403
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 207 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 244
>SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37)
Length = 1122
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 223 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 260
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = -1
Query: 548 SGLRKADHNAFSADARYEKSGITWLALTQHMHNLNAGHYTARTHRHKAHRNKN 390
S L+ + FS + G+ + ++H + + H+ HRH HR+ +
Sbjct: 401 SPLKHSTSGPFSPPRHHGHGGLEAIQTSKHQQDQHHHHHHHHHHRHHKHRSSS 453
>SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 493 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 530
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 546 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 583
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 185 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 222
>SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 342
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 180 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 217
>SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 369
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 207 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 244
>SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05)
Length = 415
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 44 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 81
>SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05)
Length = 717
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 707 PLIQCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKC 597
P C RC + H K C +C +CG HL+ C
Sbjct: 246 PKTACHRCGSAEHDGKSCKYKKYKCDNCGKVGHLKRVC 283
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,104,352
Number of Sequences: 59808
Number of extensions: 344274
Number of successful extensions: 1049
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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