Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021695
         (661 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600...    37   0.012
12_02_1207 + 26995852-26996568                                         29   3.3  
10_01_0355 + 3912019-3913046,3914354-3914678                           28   5.7  
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225...    28   7.6  
02_04_0413 + 22681957-22682035,22682253-22682788                       28   7.6  

>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
            21260180-21260461,21261084-21261587,21261973-21261981,
            21262122-21262196,21262375-21262449,21262557-21263494,
            21263577-21263607,21263694-21263979,21264691-21264905,
            21265329-21265437,21265556-21265611,21265730-21265822,
            21266348-21266393,21266496-21267221,21267489-21267550,
            21267738-21268013,21268604-21268735,21268835-21268909
          Length = 1394

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = +3

Query: 252  NLSWMLDYRVTDNKEHSFELFVFAELFNEMLMRDFGFYIYKTL 380
            +L  +LDY   D +E  FEL +FAE F+EML    G  I   L
Sbjct: 1022 SLDGLLDYTANDLEESVFELSLFAESFSEMLQHKMGCVILSFL 1064


>12_02_1207 + 26995852-26996568
          Length = 238

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 239 QNLPALAVAEGCTKICGEFG 180
           Q LP L VA GC   CG+FG
Sbjct: 163 QCLPELKVAGGCDSACGKFG 182


>10_01_0355 + 3912019-3913046,3914354-3914678
          Length = 450

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 589 GYWLPEPAHPVLSYLQIRIYFCH 657
           GY+LP P  PV+ Y   RI+F H
Sbjct: 135 GYYLPGPDSPVVLYDTRRIFFHH 157


>07_01_0322 -
           2258067-2258519,2258620-2258781,2258896-2259159,
           2259196-2259294,2259723-2260131,2260223-2260350,
           2261115-2261181,2262766-2262838,2262911-2263130
          Length = 624

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 157 NLKSRYEIPNSPHILVHPSA-TAKAGK 234
           +L   YE+PN+  + VH S  TA+AGK
Sbjct: 419 DLVIHYELPNTSELFVHRSGRTARAGK 445


>02_04_0413 + 22681957-22682035,22682253-22682788
          Length = 204

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +1

Query: 181 PNSPHILVHPSATAKAGKFCCNVATCRGC 267
           P SP   VHP     A   CCN  +  GC
Sbjct: 96  PPSPSPCVHPPCCESAAGCCCNGCSGGGC 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,597,141
Number of Sequences: 37544
Number of extensions: 161212
Number of successful extensions: 577
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)