Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021694
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   3.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   6.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.0  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 162 VLCDGVPYDVAEWLYQAC 215
           ++  GV Y +  WL+Q C
Sbjct: 97  IVPSGVVYKIGYWLHQIC 114


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 145 SRLS-AVPFAPAHLLNASLMRLNSLSDTRLTASSYVIKLGFESFAPIFA 2
           SR S A  F   H+L  +   + +L     TA  +   LG  SFA IFA
Sbjct: 154 SRYSWAKVFLVEHILVQTNKLVLALECNNTTAEGFTYFLGNMSFAHIFA 202


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 145 SRLS-AVPFAPAHLLNASLMRLNSLSDTRLTASSYVIKLGFESFAPIFA 2
           SR S A  F   H+L  +   + +L     TA  +   LG  SFA IFA
Sbjct: 154 SRYSWAKVFLVEHILVQTNKLVLALECNNTTAEGFTYFLGNMSFAHIFA 202


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = -3

Query: 462 LSPAPKRPRSISAERCAAVAGRDVFSRCRARAKSFLYMYEPL 337
           + P  K    I+ E    VA      R + R    +YM EP+
Sbjct: 473 IKPNQKHIYYITGESKEQVANSSFVERVKKRGFEVVYMTEPI 514


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 480 NWSNVTLSPAPKRPRSIS 427
           +W   TLS +P R R+ S
Sbjct: 173 DWEGTTLSQSPNRRRASS 190


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -3

Query: 234 FPFWCLRRPGITI 196
           +P WC + PG+ +
Sbjct: 618 WPVWCAQNPGMCL 630


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,400
Number of Sequences: 336
Number of extensions: 3832
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)