Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021694
         (662 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0914 + 9010613-9013316,9013537-9013748                           33   0.20 
08_01_0917 + 9033451-9036136,9036373-9036722                           33   0.27 
08_01_0913 + 8995491-8995926,8995976-8997352,8997431-8998174,899...    30   1.9  
07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331     30   1.9  
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009     29   2.5  
03_05_0920 - 28812796-28813325,28814019-28816377                       29   2.5  
08_01_0662 + 5714108-5714147,5714336-5715669,5716482-5716673,571...    28   5.8  
04_04_1529 + 34176547-34177215,34177280-34177320,34178777-34179053     28   5.8  

>08_01_0914 + 9010613-9013316,9013537-9013748
          Length = 971

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 19/75 (25%), Positives = 38/75 (50%)
 Frame = +3

Query: 6   NMGAKDSKPSFITYEDAVKRVSDSELRRIREAFKRCAGANGTALSLEAFVHEVLCDGVPY 185
           N+  + +  SF+T  DA++R+     R++ +    C+G++      +A V E +C+G   
Sbjct: 749 NLSQRGASRSFLTECDALRRIRH---RKLVKVITVCSGSDQNGDEFKALVLEFICNGT-- 803

Query: 186 DVAEWLYQACGGTKR 230
            + EWL+      +R
Sbjct: 804 -LDEWLHANTTAVRR 817


>08_01_0917 + 9033451-9036136,9036373-9036722
          Length = 1011

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 18/67 (26%), Positives = 36/67 (53%)
 Frame = +3

Query: 6   NMGAKDSKPSFITYEDAVKRVSDSELRRIREAFKRCAGANGTALSLEAFVHEVLCDGVPY 185
           N+  + +  SF+T  DA++R+     R++ +    C+G++      +A V E +C+G   
Sbjct: 743 NLSQRGASRSFLTECDALRRIRH---RKLVKVITICSGSDQNGDEFKALVLEFICNG--- 796

Query: 186 DVAEWLY 206
            + EWL+
Sbjct: 797 SLDEWLH 803


>08_01_0913 +
           8995491-8995926,8995976-8997352,8997431-8998174,
           8998402-8998748
          Length = 967

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = +3

Query: 6   NMGAKDSKPSFITYEDAVKRVSDSELRRIREAFKRCAGANGTALSLEAFVHEVLCDGVPY 185
           N+  + +  SF++  DA++R+     R++ +    C+G +      +A V E +C+G   
Sbjct: 701 NLDQRGASRSFLSECDALRRIRH---RKLVKVITVCSGLDQNGDEFKALVLEFICNG--- 754

Query: 186 DVAEWLY 206
            + EWL+
Sbjct: 755 SLDEWLH 761


>07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331
          Length = 599

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 210 PGITIPQHRTELRRTEPREQKPPGSVPSRS 121
           PG  +PQ  T +  T P     PGS+P R+
Sbjct: 423 PGALLPQEMTHMPATPPLSALEPGSLPERA 452


>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
          Length = 768

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 210 PGITIPQHRTELRRTEPREQKPPGSVPSRS 121
           PG  +PQ  T +  T P     PGS+P R+
Sbjct: 611 PGALLPQEMTPMPATPPPSALEPGSLPERA 640


>03_05_0920 - 28812796-28813325,28814019-28816377
          Length = 962

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 369 LEPCTWRIRLSLPLQRSAQLKYSLASLAQETKLH 470
           L P  W+ RLS+ L  +  ++Y L SLAQ+T +H
Sbjct: 702 LRPLEWKKRLSIALDVARGVEY-LHSLAQQTFIH 734


>08_01_0662 +
           5714108-5714147,5714336-5715669,5716482-5716673,
           5716769-5716958,5717398-5717477
          Length = 611

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = +3

Query: 429 KYSLASLAQETKLHLTS-SGLGYSYTKIYSAVKMVIV*S-K*CL*SGNPHFLSDLGWCYS 602
           KY L SL+    L L + SG    Y       K+V+V   + C   GN   LS   WC +
Sbjct: 438 KYLLRSLSSARSLELLAHSGESIKYFACVYTAKVVMVRELRRCSTFGNLKTLSLGEWCMA 497

Query: 603 FGREGAAFLLR 635
              +G  FLL+
Sbjct: 498 AEFDGLIFLLQ 508


>04_04_1529 + 34176547-34177215,34177280-34177320,34178777-34179053
          Length = 328

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = -3

Query: 516 HCRSLCMSSQDLNWSNVTLSPAPKRPRSISAERCAAVAGRDVFSR 382
           HC SLC     L           K+ R +  E    +A  DVF R
Sbjct: 264 HCTSLCREINKLQHGEAEAEAGWKKKRDVQEEMLHLMATTDVFDR 308


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,443,837
Number of Sequences: 37544
Number of extensions: 439260
Number of successful extensions: 1154
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)