Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021693
         (734 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0349 + 2677347-2677424,2677548-2677631,2677717-2677821,267...    31   1.3  
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944...    30   1.7  
10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-38...    29   2.9  
05_04_0272 + 19624898-19625071,19625909-19626370,19626471-196269...    29   5.1  

>12_01_0349 +
           2677347-2677424,2677548-2677631,2677717-2677821,
           2678217-2678363,2678987-2679244,2679337-2679468,
           2679550-2679570
          Length = 274

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -1

Query: 722 KLYITLNVTVEQGRN*TFKMSMDTLI-AIVESMGNLKNRLHEENTGMTK 579
           K Y+ ++ T EQ R+   +  +   + A  E +  LKNR+HEE  G TK
Sbjct: 70  KDYVDMHRTTEQERD-NIEHEVSVFVKACKEQIDILKNRIHEEKGGSTK 117


>01_05_0687 + 24288648-24292746,24293737-24293844,24294333-24294442,
            24295208-24295282
          Length = 1463

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +1

Query: 208  PGIMAPVPAPSGTRSLAAIVRDPRLLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRP 387
            P +++PV  P G   + AI R    L+E  +   P+ S      T  +  +PL N+    
Sbjct: 1209 PAVISPVQTPDGLADVPAIDRVAVALEESPQR--PLVSGEMEAGTVPIRSSPLKNISEGS 1266

Query: 388  SPYSQHASH 414
             P  +  SH
Sbjct: 1267 LPQLESESH 1275


>10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-389538,
            389753-389894,392274-392533,392737-393015,394796-394939
          Length = 1190

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 354  QYISSAPHIAP*THWG*LTVQFIQQSRITHNRC*TPSATRCRNRCHDPRIIVPVRTCRQK 175
            QY +  P+  P   +G +  Q + ++ +  N    P+A   RN    P +I PV     +
Sbjct: 1036 QYSNVHPYAGP--EFGYVPAQPVHKTPVNFNAM-VPTAALFRNGA--PEVINPVIVKPDR 1090

Query: 174  QHSHSLP 154
            QH H+LP
Sbjct: 1091 QHRHTLP 1097


>05_04_0272 +
           19624898-19625071,19625909-19626370,19626471-19626905,
           19626992-19627237,19627318-19628085,19628245-19628417,
           19629337-19629440,19629525-19630127,19630210-19630214
          Length = 989

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 283 LDELDRESSPVSSWSNV-GRTGDVLPTPLSNVETRP 387
           +D L     P+SS+S + G   D LP+P SNV  RP
Sbjct: 855 VDTLPSTIRPLSSYSLLDGSLDDGLPSPASNVSFRP 890


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,175,834
Number of Sequences: 37544
Number of extensions: 441084
Number of successful extensions: 1245
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)