Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021693
(734 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein. 44 4e-04
BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein. 44 4e-04
BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein. 44 4e-04
AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated tra... 44 4e-04
AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated tr... 44 4e-04
AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens ... 44 4e-04
AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 44 4e-04
AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated tr... 44 4e-04
AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated tr... 44 4e-04
D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein. 44 8e-04
CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein. 44 8e-04
BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated pr... 44 8e-04
BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated pr... 44 8e-04
BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated pr... 44 8e-04
AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein. 44 8e-04
AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein. 41 0.004
AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated pro... 40 0.007
AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated pro... 40 0.007
AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein. 40 0.007
AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-l... 31 3.2
AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase p... 31 3.2
AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase p... 31 3.2
AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein. 31 3.2
>BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein.
Length = 317
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHLFLHLVAL 247
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVL 131
>BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHLFLHLVAL 247
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVL 40
>BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHLFLHLVAL 247
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVL 40
>AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated
transmembrane protein 4 beta protein.
Length = 370
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHLFLHLVAL 247
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 159 CCLCCHVRTGTILLGVWYLIINAVVL 184
>AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta, variant 1 protein.
Length = 317
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHLFLHLVAL 247
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVL 131
>AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens
cDNA PSEC0001 fis, clone NT2RM1000066, moderately
similar to Lysosomal-associated transmembrane protein 4
beta. ).
Length = 226
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHLFLHLVAL 247
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVL 40
>AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane
transporter protein protein.
Length = 283
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHLFLHLVAL 247
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 72 CCLCCHVRTGTILLGVWYLIINAVVL 97
>AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta variant 2 protein.
Length = 317
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHLFLHLVAL 247
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVL 131
>AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated
transmembrane protein 4 beta protein.
Length = 226
Score = 44.4 bits (100), Expect = 4e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHLFLHLVAL 247
CC C HVRTGTI+LG W+L ++ V L
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVL 40
>D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein.
Length = 254
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 146 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 241
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 32 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 63
>CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein.
Length = 233
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 146 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 241
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 146 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 241
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 146 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 241
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 146 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 241
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein.
Length = 215
Score = 43.6 bits (98), Expect = 8e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 146 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLV 241
S+R CC C HVRTGTIILG+W++ ++L+
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLL 42
>AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein.
Length = 38
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 146 SERGSEWLCCFCLHVRTGTIILGSWHL 226
S+R CC C HVRTGTIILG+W++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYM 37
>AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.007
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHL 226
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.007
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHL 226
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.007
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 170 CCFCLHVRTGTIILGSWHL 226
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-like
5 (cholinesterase-related cell division controller)
protein.
Length = 1512
Score = 31.5 bits (68), Expect = 3.2
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 229 PAPSGTRSLAAIVRDPRLLDELDRESSP-VSSWSNVGRTGDVLPTPLSNVETR--PSPYS 399
P+P+G S R PR R SP S S+ R GDV P+P S+ R SPYS
Sbjct: 341 PSPAGGGSSPYSRRLPRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYS 400
>AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1452
Score = 31.5 bits (68), Expect = 3.2
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 229 PAPSGTRSLAAIVRDPRLLDELDRESSP-VSSWSNVGRTGDVLPTPLSNVETR--PSPYS 399
P+P+G S R PR R SP S S+ R GDV P+P S+ R SPYS
Sbjct: 341 PSPAGGGSSPYSRRLPRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYS 400
>AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1512
Score = 31.5 bits (68), Expect = 3.2
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 229 PAPSGTRSLAAIVRDPRLLDELDRESSP-VSSWSNVGRTGDVLPTPLSNVETR--PSPYS 399
P+P+G S R PR R SP S S+ R GDV P+P S+ R SPYS
Sbjct: 341 PSPAGGGSSPYSRRLPRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYS 400
>AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein.
Length = 784
Score = 31.5 bits (68), Expect = 3.2
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 229 PAPSGTRSLAAIVRDPRLLDELDRESSP-VSSWSNVGRTGDVLPTPLSNVETR--PSPYS 399
P+P+G S R PR R SP S S+ R GDV P+P S+ R SPYS
Sbjct: 341 PSPAGGGSSPYSRRLPRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYS 400
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,669,864
Number of Sequences: 237096
Number of extensions: 2509969
Number of successful extensions: 5992
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5992
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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