Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021693
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061575-1|AAL29123.1|  428|Drosophila melanogaster SD02746p pro...    50   4e-06
AF317419-1|AAK69597.1|  432|Drosophila melanogaster lysosomal-as...    50   4e-06
AE013599-705|AAF59049.3|  432|Drosophila melanogaster CG14767-PC...    50   4e-06
AE013599-704|AAF59050.2|  432|Drosophila melanogaster CG14767-PB...    50   4e-06
AE013599-703|AAM68833.2|  428|Drosophila melanogaster CG14767-PA...    50   4e-06
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    29   5.0  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    29   5.0  
AE014298-2696|AAF48822.1|  116|Drosophila melanogaster CG15061-P...    29   8.7  

>AY061575-1|AAL29123.1|  428|Drosophila melanogaster SD02746p
           protein.
          Length = 428

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = +2

Query: 143 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGV 253
           G+    E+ CCF LHV T T+++G WHLFL+++AL V
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSV 67



 Score = 32.7 bits (71), Expect = 0.53
 Identities = 24/65 (36%), Positives = 34/65 (52%)
 Frame = +1

Query: 253 LAAIVRDPRLLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSL 432
           LA I R+P ++DEL+  +   +    V  +   LPTPLS VE    PY+       DHSL
Sbjct: 68  LAVIWRNPEMMDELEGGTHDYT----VDLSAPALPTPLSKVE---PPYAYR-----DHSL 115

Query: 433 IYRKY 447
            Y+ +
Sbjct: 116 NYQNF 120


>AF317419-1|AAK69597.1|  432|Drosophila melanogaster
           lysosomal-associated transmembraneprotein protein.
          Length = 432

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = +2

Query: 143 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGV 253
           G+    E+ CCF LHV T T+++G WHLFL+++AL V
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSV 67



 Score = 37.5 bits (83), Expect = 0.019
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = +1

Query: 253 LAAIVRDPRLLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSL 432
           LA I R+P ++DEL+  +   +    V  +   LPTPLS VE    PY+       DHSL
Sbjct: 68  LAVIWRNPEMMDELEGGTHDYT----VDLSAPALPTPLSKVE---PPYAYR-----DHSL 115

Query: 433 IYRKYFEFF 459
            YRK ++ F
Sbjct: 116 NYRKRYQNF 124


>AE013599-705|AAF59049.3|  432|Drosophila melanogaster CG14767-PC,
           isoform C protein.
          Length = 432

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = +2

Query: 143 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGV 253
           G+    E+ CCF LHV T T+++G WHLFL+++AL V
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSV 67



 Score = 37.5 bits (83), Expect = 0.019
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = +1

Query: 253 LAAIVRDPRLLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSL 432
           LA I R+P ++DEL+  +   +    V  +   LPTPLS VE    PY+       DHSL
Sbjct: 68  LAVIWRNPEMMDELEGGTHDYT----VDLSAPALPTPLSKVE---PPYAYR-----DHSL 115

Query: 433 IYRKYFEFF 459
            YRK ++ F
Sbjct: 116 NYRKRYQNF 124


>AE013599-704|AAF59050.2|  432|Drosophila melanogaster CG14767-PB,
           isoform B protein.
          Length = 432

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = +2

Query: 143 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGV 253
           G+    E+ CCF LHV T T+++G WHLFL+++AL V
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSV 67



 Score = 37.5 bits (83), Expect = 0.019
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = +1

Query: 253 LAAIVRDPRLLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSL 432
           LA I R+P ++DEL+  +   +    V  +   LPTPLS VE    PY+       DHSL
Sbjct: 68  LAVIWRNPEMMDELEGGTHDYT----VDLSAPALPTPLSKVE---PPYAYR-----DHSL 115

Query: 433 IYRKYFEFF 459
            YRK ++ F
Sbjct: 116 NYRKRYQNF 124


>AE013599-703|AAM68833.2|  428|Drosophila melanogaster CG14767-PA,
           isoform A protein.
          Length = 428

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = +2

Query: 143 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGV 253
           G+    E+ CCF LHV T T+++G WHLFL+++AL V
Sbjct: 31  GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSV 67



 Score = 32.7 bits (71), Expect = 0.53
 Identities = 24/65 (36%), Positives = 34/65 (52%)
 Frame = +1

Query: 253 LAAIVRDPRLLDELDRESSPVSSWSNVGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSL 432
           LA I R+P ++DEL+  +   +    V  +   LPTPLS VE    PY+       DHSL
Sbjct: 68  LAVIWRNPEMMDELEGGTHDYT----VDLSAPALPTPLSKVE---PPYAYR-----DHSL 115

Query: 433 IYRKY 447
            Y+ +
Sbjct: 116 NYQNF 120


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p
           protein.
          Length = 1233

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 266 CVILDCWMNWTVSHPQ*VHGAMWGALEMYCPHHCQ 370
           CV   C  N T SHP+ V+G  W   + YC HH Q
Sbjct: 203 CVRHAC--NMTESHPKDVYGFEW-ICKTYCEHHEQ 234


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
           protein.
          Length = 1233

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 266 CVILDCWMNWTVSHPQ*VHGAMWGALEMYCPHHCQ 370
           CV   C  N T SHP+ V+G  W   + YC HH Q
Sbjct: 203 CVRHAC--NMTESHPKDVYGFEW-ICKTYCEHHEQ 234


>AE014298-2696|AAF48822.1|  116|Drosophila melanogaster CG15061-PA
           protein.
          Length = 116

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = +3

Query: 306 IPSEFMEQCGAHWRCT---AHTTVKCGNSSQPIL----STCF 410
           I S  +++CG HW CT       VK  + + P L    STCF
Sbjct: 68  INSPVVQRCGGHWACTPLGMSMIVKISSQAAPSLAGDSSTCF 109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,618,877
Number of Sequences: 53049
Number of extensions: 745793
Number of successful extensions: 2180
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)