Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021692
(786 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 99 6e-20
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 88 3e-16
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 87 4e-16
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 87 4e-16
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 81 3e-14
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 79 2e-13
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 79 2e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 78 2e-13
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 78 2e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 78 3e-13
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 76 9e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 76 9e-13
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 76 1e-12
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 75 2e-12
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 75 3e-12
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 74 4e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 71 3e-11
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 70 6e-11
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 70 8e-11
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 69 1e-10
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 69 1e-10
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 69 2e-10
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 69 2e-10
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 69 2e-10
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 68 2e-10
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 68 2e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 67 5e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 66 7e-10
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 66 7e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 66 9e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 66 9e-10
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 66 9e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 66 9e-10
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 65 2e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 64 4e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 63 9e-09
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 62 1e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 62 2e-08
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 62 2e-08
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 60 6e-08
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 60 8e-08
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 60 8e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 59 1e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 59 1e-07
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 59 1e-07
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 58 2e-07
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 57 4e-07
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 56 8e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 56 8e-07
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 56 1e-06
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 1e-06
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 56 1e-06
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 55 2e-06
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 55 2e-06
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 55 2e-06
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 55 2e-06
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 55 2e-06
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 54 4e-06
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 54 4e-06
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 54 4e-06
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 54 5e-06
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 54 5e-06
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 53 7e-06
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 53 9e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 53 9e-06
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 52 1e-05
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 52 2e-05
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 52 2e-05
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 52 2e-05
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 52 2e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 52 2e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 52 2e-05
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 51 3e-05
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 51 3e-05
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 50 9e-05
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 50 9e-05
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 50 9e-05
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 49 2e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 48 3e-04
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 48 4e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 47 5e-04
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 46 8e-04
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 46 8e-04
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 46 0.001
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 46 0.001
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 45 0.002
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 45 0.002
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 45 0.002
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 45 0.002
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 44 0.003
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 44 0.004
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 44 0.006
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 43 0.008
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 43 0.008
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 43 0.008
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 42 0.013
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 40 0.053
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 39 0.12
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 34 3.5
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 8.1
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 99 bits (238), Expect = 6e-20
Identities = 54/93 (58%), Positives = 61/93 (65%)
Frame = -2
Query: 281 KGGG*ESKSILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 102
K GG +LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 101 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 3
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 73.7 bits (173), Expect = 5e-12
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = -3
Query: 508 TNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVH 329
TN G S I +R I+E PAKC+EKI STD P CAI SGG TVH
Sbjct: 50 TNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVH 109
Query: 328 PVPAPFSTILLEINNIREGGRSQN 257
PVP P STI L + ++EGG +QN
Sbjct: 110 PVPTPLSTIPLNKSKVKEGGSNQN 133
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -1
Query: 633 SPPPAGPKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAQ 508
SPPPAG K +VFKFRSV +IVIAPA TGS++N+K AV T Q
Sbjct: 8 SPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQ 49
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 87.8 bits (208), Expect = 3e-16
Identities = 46/69 (66%), Positives = 47/69 (68%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 114 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNL 173
Query: 483 SFDQLPLFV 509
SFDQ+PLFV
Sbjct: 174 SFDQMPLFV 182
Score = 87.0 bits (206), Expect = 5e-16
Identities = 47/94 (50%), Positives = 51/94 (54%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMI 72
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVPL+LGAPD+AFPR+NN+ F PP L
Sbjct: 73 GGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
Score = 65.7 bits (153), Expect = 1e-09
Identities = 38/80 (47%), Positives = 43/80 (53%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGDQFYINIXXXXXXXXXXXXX 691
AVGITAF AGAIT+LLTDRNLNTSFF PAGGGD
Sbjct: 184 AVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFS 243
Query: 692 XXQDLV*FLILFSQERGKKE 751
QDLV F +LF ++ K +
Sbjct: 244 FSQDLVSFHMLFPKKVEKSK 263
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 87.4 bits (207), Expect = 4e-16
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PILYQHLF FFGHPEVYILILPGFGIISH+IF KK F +LG+IYA+L
Sbjct: 212 PILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAML 262
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 253 IDF 261
+ F
Sbjct: 84 MSF 86
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +3
Query: 315 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/83 (39%), Positives = 38/83 (45%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGDQFYINIXXXXXXXXXXXXX 691
+V ITA AGAIT+LLTDRN+NTSFF P+GGGD
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYIL 230
Query: 692 XXQDLV*FLILFSQERGKKETFG 760
+ E GKKETFG
Sbjct: 231 ILPGFGIISHMIFNESGKKETFG 253
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 87.4 bits (207), Expect = 4e-16
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 90 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKM 149
Query: 483 SFDQLPLFV 509
SFDQ+PLF+
Sbjct: 150 SFDQMPLFI 158
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/70 (58%), Positives = 46/70 (65%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 253 IDFDSYPPPL 282
+ F PP L
Sbjct: 73 MSFWLLPPSL 82
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/41 (70%), Positives = 30/41 (73%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
AVGITA AGAIT+LLTDRNLNTSFF PAGGGD
Sbjct: 160 AVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGD 200
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILI 693
PILYQHLF FFGHPEVYILI
Sbjct: 201 PILYQHLFWFFGHPEVYILI 220
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/92 (45%), Positives = 49/92 (53%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMI 76
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPP 276
N LVPL++GAPD+AFPR+NN+ F PP
Sbjct: 77 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 76.2 bits (179), Expect = 9e-13
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PILYQHLF FFGHPEVYILILPGFG+ISH++ KK F +G+++A+L
Sbjct: 229 PILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAML 279
Score = 71.3 bits (167), Expect = 3e-11
Identities = 39/68 (57%), Positives = 41/68 (60%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 486 FDQLPLFV 509
Q PLFV
Sbjct: 179 QYQTPLFV 186
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V ITA A IT+LLTDRNLNT+FF PAGGGD
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGD 228
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 78.6 bits (185), Expect = 2e-13
Identities = 41/92 (44%), Positives = 48/92 (52%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMI 75
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPP 276
N LVPL++GAPD+AFPR+NN+ F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 75.4 bits (177), Expect = 2e-12
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PILYQHLF FFGHPEVYILILPGFG+ISH++ KK F +G+++A++
Sbjct: 228 PILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMM 278
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 486 FDQLPLFV 509
Q PLFV
Sbjct: 178 QYQTPLFV 185
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V +TA A IT+LLTDRNLNT+FF PAGGGD
Sbjct: 187 SVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGD 227
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 78.6 bits (185), Expect = 2e-13
Identities = 41/92 (44%), Positives = 48/92 (52%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILI 75
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPP 276
N LVPL++GAPD+AFPR+NN+ F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 76.6 bits (180), Expect = 7e-13
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PILYQHLF FFGHPEVYILILPGFGIISH++ KK F +G+++A++
Sbjct: 228 PILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMM 278
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 486 FDQLPLFV 509
Q PLFV
Sbjct: 178 QYQTPLFV 185
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
AV +TA A IT+LLTDRNLNT+FF PAGGGD
Sbjct: 187 AVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGD 227
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/92 (43%), Positives = 48/92 (52%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMI 64
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPP 276
N L+PL++GAPD+AFPR+NN+ F PP
Sbjct: 65 GGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 486 FDQLPLFV 509
Q PLFV
Sbjct: 167 QYQTPLFV 174
Score = 38.3 bits (85), Expect = 0.22
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGP 619
AV ITA A IT+LLTDRNLNT+FF P
Sbjct: 176 AVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/94 (43%), Positives = 49/94 (52%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMI 75
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVPL++GAPD+AFPR+NN+ F PP L
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 76.2 bits (179), Expect = 9e-13
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PILYQHLF FFGHPEVYILILPGFG+ISHI+ KK F +G+++A++
Sbjct: 228 PILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMM 278
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/69 (50%), Positives = 40/69 (57%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAM 176
Query: 483 SFDQLPLFV 509
+ Q PLFV
Sbjct: 177 TQYQTPLFV 185
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V ITA A IT+LLTDRNLNT+FF PAGGGD
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGD 227
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/70 (52%), Positives = 44/70 (62%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 253 IDFDSYPPPL 282
+ F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V ITA AGAIT+LLTDRN NTSFF PAGGGD
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGD 210
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 76.2 bits (179), Expect = 9e-13
Identities = 56/181 (30%), Positives = 74/181 (40%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 253 IDFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFXXXX 432
+ F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 433 XXXXXXXXXXXXXXXXXXXXNYPYLLSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 612
L Y TC S SYY IIN L + I
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 613 W 615
W
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 8.1
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 372 GRSVDLAIFSLHLAGISS 425
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 76.2 bits (179), Expect = 9e-13
Identities = 35/71 (49%), Positives = 44/71 (61%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 253 IDFDSYPPPLY 285
I F PP L+
Sbjct: 101 ISFWLLPPALF 111
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/69 (50%), Positives = 42/69 (60%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 118 LVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGM 177
Query: 483 SFDQLPLFV 509
+ ++PLFV
Sbjct: 178 TMSRIPLFV 186
Score = 48.0 bits (109), Expect = 3e-04
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V ITA AGAIT+LLTDR NT+FF PAGGGD
Sbjct: 188 SVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGD 228
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PILYQHLF FFGHPEVYILILPGFG+ISHI+ T RK F +G++YA++
Sbjct: 236 PILYQHLFWFFGHPEVYILILPGFGMISHIVSTFSRKP-VFGYIGMVYAMV 285
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 22 GTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPV 81
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++G+PD+AFPR+NNI F PP L
Sbjct: 82 MIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQ 184
Query: 483 SFDQLPLFV 509
S ++PLFV
Sbjct: 185 SMYRIPLFV 193
Score = 49.6 bits (113), Expect = 9e-05
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +2
Query: 521 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+TAF AGAIT+LLTDRN NTSFF +GGGD
Sbjct: 198 VTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGD 235
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 75.4 bits (177), Expect = 2e-12
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PILYQHLF FFGHPEVYILILPGFGIISHI+ T K F LG++YA++
Sbjct: 231 PILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGKP-VFGYLGMVYAMI 280
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/69 (47%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGM 179
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 180 TMHRLPLFV 188
Score = 63.3 bits (147), Expect = 7e-09
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 17 GTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPA 76
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N VP+++GAPD+AFPR+NNI F PP L
Sbjct: 77 MIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V +TAF AGAIT+LLTDRN NT+FF PAGGGD
Sbjct: 190 SVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGD 230
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +1
Query: 70 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 250 NIDFDSYPP 276
N+ F PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 74.1 bits (174), Expect = 4e-12
Identities = 37/80 (46%), Positives = 47/80 (58%)
Frame = +1
Query: 547 TTCFSWSYYNIINRSKLKYIIFWSCWRRRPILYQHLF*FFGHPEVYILILPGFGIISHII 726
++ SW N S F IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Query: 727 FTRKRKKRNFWLLGIIYAIL 786
K+ F LG++YA++
Sbjct: 236 AHYSGKREPFGYLGMVYAMI 255
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAI 783
PILY+HLF FFGHPEVYILI+PGFGIISH++ T KK F + ++YA+
Sbjct: 229 PILYEHLFWFFGHPEVYILIIPGFGIISHVVSTYS-KKPVFGEISMVYAM 277
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/69 (52%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 178 TMHKLPLFV 186
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 247 NNIDF 261
NNI F
Sbjct: 99 NNIAF 103
Score = 41.9 bits (94), Expect = 0.018
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
++ ITAF + IT+LL DRN NTSFF +GGGD
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGD 228
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 70.1 bits (164), Expect = 6e-11
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAI 783
PILYQHLF FFGHPEVYILI+PGFG++SHI+ + K F LG++YA+
Sbjct: 228 PILYQHLFWFFGHPEVYILIIPGFGMVSHIV-SAFSGKPVFGYLGMVYAM 276
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 486 FDQLPLFV 509
+LPLFV
Sbjct: 178 LHKLPLFV 185
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++GAPD+AFPR+NNI F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
A+ +TA AGAIT+LLTDRN NTSF+ PAGGGD
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGD 227
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 69.7 bits (163), Expect = 8e-11
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAI 783
PIL+QHLF FFGHPEVY+LILPGFGI+SHI + +F G+I A+
Sbjct: 318 PILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAM 367
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 315 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
Score = 38.3 bits (85), Expect = 0.22
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFGPAGGGD 634
A IT+LL DRN T+FF P+GGGD
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGD 317
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 69.3 bits (162), Expect = 1e-10
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
P LYQHLF FFGHPEVYI+ILPGFGIIS I+ T RK F LG+ YA++
Sbjct: 271 PELYQHLFWFFGHPEVYIMILPGFGIISQIVSTFSRKP-VFGYLGMAYAMV 320
Score = 49.6 bits (113), Expect = 9e-05
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +3
Query: 312 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 491
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 492 QLPLFV 509
++PLFV
Sbjct: 223 KMPLFV 228
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 112 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V +TAF A AIT+LLTDRN T+F+ AGGGD
Sbjct: 230 SVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGD 270
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
+LYQHLF FFGHPEVYILILPGFG++SHII T KKR F + +I A+L
Sbjct: 233 VLYQHLFWFFGHPEVYILILPGFGLVSHIIATFS-KKRVFGHVPMIAAML 281
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +3
Query: 309 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 48.0 bits (109), Expect = 3e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 247 NNIDF 261
NN F
Sbjct: 102 NNFSF 106
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V +T+F A AIT+LL DRN NTSF+ P GGGD
Sbjct: 191 SVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGD 231
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAI 783
PI YQH F FFGHPEVYILI+PGFGI+SHI+ T KK F + ++YA+
Sbjct: 229 PIFYQHAFWFFGHPEVYILIIPGFGIVSHIVSTYS-KKPVFGEISMVYAM 277
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/69 (53%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 483 SFDQLPLFV 509
S ++PLFV
Sbjct: 178 SMHKMPLFV 186
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 247 NNIDF 261
N+I F
Sbjct: 99 NSIGF 103
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGDQFY 643
A+ ITAF + IT+LL DRN NTSFF AGGGD +
Sbjct: 188 AIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIF 231
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
ILYQHLF FFGHPEVYILI+PGFGIIS +I + K F LG++YA++
Sbjct: 256 ILYQHLFWFFGHPEVYILIIPGFGIISTVI-SANSNKNVFGYLGMVYAMM 304
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 73 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 250 NIDFDSYPPPLY 285
N+ + P L+
Sbjct: 126 NVSYWLLIPSLF 137
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
AV ITA A AIT+LLTDRNLNTSF+ AGGGD
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGD 254
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAI 783
PILYQHLF FFGHPEVYILI+PGFGIIS I + K F LG++YA+
Sbjct: 229 PILYQHLFWFFGHPEVYILIIPGFGIISTTI-SANSNKSVFGYLGMVYAM 277
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 56.4 bits (130), Expect = 8e-07
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 73 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 250 NIDF 261
NI +
Sbjct: 100 NISY 103
Score = 46.8 bits (106), Expect = 6e-04
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
AV ITA AG IT++LTDRN NTSFF AGGGD
Sbjct: 188 AVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGD 228
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PIL+QH+F FFGHPEVYI+ILP FG+ISHI+ T KK F L ++YA++
Sbjct: 334 PILFQHIFWFFGHPEVYIVILPAFGVISHIVATFS-KKPIFGYLPMVYALV 383
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V +TA+ AGAIT+LLTDRN T+FF PAGGGD
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGD 333
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 70 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 243
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 244 INNIDFDSY 270
+NN+ + Y
Sbjct: 203 LNNLSYWMY 211
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/48 (62%), Positives = 32/48 (66%)
Frame = +3
Query: 639 FISTFILIFWTS*SLYFNFTRIWYNFSYYFHXXXXXXXXXXXRNNLCY 782
F+STFILIFWT SLYFNFT IWYNFSYYF +NLCY
Sbjct: 23 FMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCY 70
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 66.9 bits (156), Expect = 5e-10
Identities = 35/68 (51%), Positives = 41/68 (60%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 486 FDQLPLFV 509
++PLFV
Sbjct: 97 PXRMPLFV 104
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
AV ITA AGAIT+LLTDRN+NTSFF PAGGGD
Sbjct: 106 AVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGD 146
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYA 780
PIL+QHLF FFGHPEVYILILP FG+ISHI+ K F +G+ +A
Sbjct: 231 PILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWA 279
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 315 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 37.1 bits (82), Expect = 0.50
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 253 I 255
+
Sbjct: 102 L 102
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFGPAGGGD 634
A +T+LL DR+ +TSF+ P GGGD
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGD 230
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PIL+QHLF FFGHPEVYILI+PGFGIIS I + K F +G++YA++
Sbjct: 254 PILFQHLFWFFGHPEVYILIIPGFGIISTTI-SSSSNKPIFGYIGMVYAMM 303
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXX 177
GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 44 GTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPAL 103
Query: 178 XXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N L+PL++G PD+AFPR+NNI F PP L
Sbjct: 104 IGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 4/45 (8%)
Frame = +3
Query: 303 IVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 146 IIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
Score = 39.5 bits (88), Expect = 0.093
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2
Query: 569 ITILLTDRNLNTSFFGPAGGGD 634
IT++LTDRN NTSFF AGGGD
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGD 253
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/69 (52%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 178 TMHKLPLFV 186
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 247 NNIDF 261
NNI F
Sbjct: 99 NNIAF 103
Score = 41.9 bits (94), Expect = 0.018
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
++ ITAF + IT+LL DRN NTSFF +GGGD
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGD 228
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 66.1 bits (154), Expect = 9e-10
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFT 732
PILYQHLF FFGHPEVYILILP FG+ISH+I T
Sbjct: 234 PILYQHLFWFFGHPEVYILILPAFGVISHVIST 266
Score = 36.7 bits (81), Expect = 0.66
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 425
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 35.1 bits (77), Expect = 2.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 112 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 255
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSI 105
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 486 FDQLPLFV 509
+LPLFV
Sbjct: 178 LHKLPLFV 185
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++GAPD+AFPR+NNI F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
A+ +TA AGAIT+LLTDRN NTSF+ PAGGGD
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGD 227
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 486 FDQLPLFV 509
+LPLFV
Sbjct: 178 LHKLPLFV 185
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++GAPD+AFPR+NNI F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++GAPD+AFPR+NNI F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/69 (49%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 178 TMHKLPLFV 186
Score = 49.6 bits (113), Expect = 9e-05
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 247 NNIDF 261
NNI F
Sbjct: 99 NNIGF 103
Score = 40.7 bits (91), Expect = 0.040
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
A+ ITA + +T+LL DRN NTSFF AGGGD
Sbjct: 188 AILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGD 228
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 62.9 bits (146), Expect = 9e-09
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKK 747
P+LYQHLF FFGHPEVYI+ILPGFGIIS ++ T K+
Sbjct: 234 PVLYQHLFWFFGHPEVYIMILPGFGIISLLLSTYTTKE 271
Score = 40.7 bits (91), Expect = 0.040
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 18 GTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPA 77
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N VP+++G+PD+AFPR+NNI F PP L
Sbjct: 78 MIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAI 783
P+LY+H+F FFGHPEVYILI+P FG++S I+ KK F +G+IYA+
Sbjct: 246 PLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQV-YAKKPIFGKIGMIYAM 294
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 195 DYSKLPLFV 203
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 82 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 262 DSYPPPLYY 288
P + +
Sbjct: 121 VVLLPSMLF 129
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V ITA A +T+LL DRN NTSFF +GGGD
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGD 245
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAI 783
P+LY+H+F FFGHPEVYILI+P FG++S I+ KK F +G+IYA+
Sbjct: 246 PLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQV-YAKKPIFGKIGMIYAM 294
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 195 DYSKLPLFV 203
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 82 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 262 DSYPPPLYY 288
P + +
Sbjct: 121 VVLLPSMLF 129
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V ITA A +T+LL DRN NTSFF +GGGD
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGD 245
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 60.1 bits (139), Expect = 6e-08
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
P+L+QHLF FFGHPEVYI+ LP FGI+S +I T RK
Sbjct: 268 PLLFQHLFWFFGHPEVYIVALPAFGIVSDLISTHARK 304
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 59.7 bits (138), Expect = 8e-08
Identities = 27/49 (55%), Positives = 33/49 (67%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYA 780
P+LYQHLF FFGHPEVY++ILP FGIIS + K R F + +A
Sbjct: 238 PLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFA 286
Score = 50.0 bits (114), Expect = 7e-05
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 247 NNIDF 261
N + F
Sbjct: 109 NALSF 113
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 521 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+T+F AG++ LL DRN NTSF+ GG+
Sbjct: 200 LTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGN 237
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 59.7 bits (138), Expect = 8e-08
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +1
Query: 661 FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
FFGHPEVYILILPGFG+ISHI+ KK F +G+++A++
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMM 43
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 195 DYSKLPLFV 203
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 82 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 262 DSYPPPLYY 288
P + +
Sbjct: 121 VVLLPSMLF 129
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V ITA A +T+LL DRN NTSFF +GGGD
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGD 245
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 195 DYSKLPLFV 203
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 82 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 262 DSYPPPLYY 288
P + +
Sbjct: 121 VVLLPSMLF 129
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
+V ITA A +T+LL DRN NTSFF +GGGD
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGD 245
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
+L+QHLF FFGHPEVY+L LP FGI+S II RK F +G+I+A L
Sbjct: 254 LLWQHLFWFFGHPEVYVLALPFFGIVSEIIPVFSRKPM-FGYVGLIFATL 302
Score = 37.1 bits (82), Expect = 0.50
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 70 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 250 NIDF 261
F
Sbjct: 124 AFGF 127
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
P+LYQHLF FFGHPEVY++ILP FG+ S +I T K F G++Y I+
Sbjct: 238 PVLYQHLFWFFGHPEVYVIILPVFGLTS-LILTSIIHKDIFGREGMMYCII 287
Score = 33.5 bits (73), Expect = 6.1
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 112 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISF 112
Score = 33.5 bits (73), Expect = 6.1
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 425
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PIL+QHLF FGHPEVYI+ILP +GI+ ++ RK + W G ++A++
Sbjct: 266 PILWQHLFWIFGHPEVYIMILPAWGILGDVLSFFARKPHH-WYRGTVWAMV 315
Score = 34.7 bits (76), Expect = 2.7
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 115 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 56.4 bits (130), Expect = 8e-07
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
+L+QHLF FFGHPEVYI ILP GI+SHI+ R+
Sbjct: 277 LLWQHLFWFFGHPEVYIAILPAMGIVSHILINSMRR 312
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 56.4 bits (130), Expect = 8e-07
Identities = 30/68 (44%), Positives = 38/68 (55%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGM 182
Query: 483 SFDQLPLF 506
++ +PLF
Sbjct: 183 KYENVPLF 190
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 247 NNIDFDSYPPPL 282
NNI F P L
Sbjct: 104 NNISFWLLVPSL 115
Score = 35.9 bits (79), Expect = 1.2
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
AV TA A +T+ + DRN NTSFF AGGGD
Sbjct: 193 AVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGD 233
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
+L+QHLF FFGHPEVYILILP GIIS ++ T RK
Sbjct: 247 VLWQHLFWFFGHPEVYILILPTMGIISEVLPTFSRK 282
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 401
+VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 41.9 bits (94), Expect = 0.018
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +1
Query: 514 CRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFWSCWRRRP 636
C +Y TCFS S+Y IIN K KY IFW W P
Sbjct: 100 CCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
Score = 38.7 bits (86), Expect = 0.16
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 208 LILGAPDIAFPRINNIDFDSYPPPL 282
L+LGAPD+AFPR+NN+ F PP L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSL 25
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
IL+QHLF FFGHPEVYI++LP GIIS+I+ R +R F ++Y+ L
Sbjct: 314 ILWQHLFWFFGHPEVYIIVLPPMGIISYIL-PRFSGRRLFGFKFVVYSTL 362
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 253 IDFDSYPP 276
I F PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 55.2 bits (127), Expect = 2e-06
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
P+L+QHLF F+ HP VYI++LP FG++S ++ T RK
Sbjct: 254 PVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVATYSRK 290
Score = 42.3 bits (95), Expect = 0.013
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 253 IDFDSY 270
+ Y
Sbjct: 130 LSLYIY 135
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/36 (69%), Positives = 30/36 (83%), Gaps = 2/36 (5%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHII--FTRK 738
+L+QH F FGHPEVYILILPGFG+IS +I F+RK
Sbjct: 248 VLWQHYFWIFGHPEVYILILPGFGMISEVIPVFSRK 283
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 253 IDF 261
F
Sbjct: 119 FGF 121
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
P+L+QHLF F GHPEVYI+++P GI S +I T RK
Sbjct: 290 PVLFQHLFWFLGHPEVYIVLIPALGITSEVIATNARK 326
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFT 732
PIL+QHLF FFGHPEVYI+ +P G++S II T
Sbjct: 250 PILWQHLFWFFGHPEVYIIFIPALGMVSSIIIT 282
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
++++HLF FGHPEVYILILP FGI S +I R KR F +++AI+
Sbjct: 238 VIWEHLFWIFGHPEVYILILPAFGIFSEVIPVFAR-KRLFGYSSMVFAIV 286
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 54.0 bits (124), Expect = 4e-06
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKK 747
P L+QH+F FFGHPEVYIL+LP G++S +I R++
Sbjct: 238 PRLFQHIFWFFGHPEVYILVLPAMGLVSEVIQRMARRR 275
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 54.0 bits (124), Expect = 4e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
P++YQHLF F+ HP VYI+ILP FG+IS +I RK
Sbjct: 239 PVVYQHLFWFYSHPAVYIMILPFFGVISEVIPVHARK 275
Score = 38.3 bits (85), Expect = 0.22
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 253 IDFDSYPP 276
+ F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
PI +QHLF FFGHPEVY+L+LP GI+S +I + ++ F ++Y+ L
Sbjct: 282 PIFWQHLFWFFGHPEVYVLVLPPMGIVS-LILPKFSGRKLFGFKFVVYSTL 331
Score = 36.7 bits (81), Expect = 0.66
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 253 IDFDSYPP 276
I F PP
Sbjct: 155 IAFWLLPP 162
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
+ YQHLF FGHPEVYILILP GIIS +I RK
Sbjct: 249 VFYQHLFWTFGHPEVYILILPAMGIISEVIPVHARK 284
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNA 115
Query: 253 IDFDSY 270
+ Y
Sbjct: 116 FSYWIY 121
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHII 726
P+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 212 PLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
Score = 36.7 bits (81), Expect = 0.66
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 318 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 33.9 bits (74), Expect = 4.6
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 253 IDF 261
+ F
Sbjct: 95 LSF 97
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 53.2 bits (122), Expect = 7e-06
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKR 741
P+L+QHLF FFGHPEVYI+ LP G++S I+ T R
Sbjct: 254 PLLWQHLFWFFGHPEVYIIFLPAAGLVSMIVPTMAR 289
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 52.8 bits (121), Expect = 9e-06
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKR 741
P+L+QHLF FFGHPEVYI+ LP G++S I+ T R
Sbjct: 313 PLLWQHLFWFFGHPEVYIIFLPAAGMVSMIVPTMAR 348
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 52.8 bits (121), Expect = 9e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHII 726
PIL QHLF FFGHPEVY+LI+P FG I+ I+
Sbjct: 389 PILSQHLFWFFGHPEVYVLIIPTFGFINMIV 419
Score = 38.3 bits (85), Expect = 0.22
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 247 NNIDF 261
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHII 726
IL+QH+F FFGHPEVYI++LP FG+IS I+
Sbjct: 232 ILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 88 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDFDS 267
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 268 Y 270
Y
Sbjct: 108 Y 108
Score = 40.7 bits (91), Expect = 0.040
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 521 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFGPAGGGD 634
ITA AG +T++L DRN NTSF+ GGGD
Sbjct: 193 ITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGD 230
Score = 36.7 bits (81), Expect = 0.66
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +1
Query: 661 FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
FFGHPEVY+LILP FGI+SHI T F G++ A+L
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAML 42
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +3
Query: 648 TFILIFWTS*SLYFNFTRIWYNFSYYFHXXXXXXXXXXXRNNLCY 782
+ ++IFW+S SLYFN IWYNF YY+ NNLCY
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCY 46
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 247 NNIDFDSYPPPL 282
NNI F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKK 747
P+L+Q LF FFGHPEVYILILP G++S ++ R++
Sbjct: 226 PVLWQQLFWFFGHPEVYILILPAMGLVSELLPKMARRE 263
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = +1
Query: 505 LLSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFW--SCW 624
++ C +YS +TC WSYYN IN SKLKYI+FW S W
Sbjct: 83 IMICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSW 124
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +3
Query: 345 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 509
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFI 126
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
+L+QHLF FFGHPEVYI+ LP G++S I+ T ++ F L ++ A++
Sbjct: 245 LLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFTQRP-VFGYLAMVMALI 293
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 676 EVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
EVYILILPGFG+ISHII KK F LG+IYA++
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMM 191
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 49.6 bits (113), Expect = 9e-05
Identities = 21/38 (55%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
Frame = +1
Query: 631 RPILYQHLF*FFGHPEVYILILPGFGIISHII--FTRK 738
+P+L+QHLF F+ HP VYI+ILP G++S I+ F+RK
Sbjct: 276 QPLLWQHLFWFYSHPAVYIMILPAMGMVSDILACFSRK 313
Score = 36.7 bits (81), Expect = 0.66
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 109 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPLYY 288
+ Y +VT HA N L+PL++GA D+AFP +N + + P ++
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 49.6 bits (113), Expect = 9e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 247 NNIDFDSYPPPL 282
NNI F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 49.6 bits (113), Expect = 9e-05
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHII--FTRKRKKRNFWLLGIIYAI 783
P+L+ +LF +GHPEVYI+ILP FGI S II F RK+ ++G I AI
Sbjct: 268 PMLWANLFWIWGHPEVYIVILPAFGIFSEIISSFARKQLFGYKAMVGSIIAI 319
Score = 37.9 bits (84), Expect = 0.29
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +1
Query: 70 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 250 NIDF 261
N+ F
Sbjct: 139 NLSF 142
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +1
Query: 595 LKYIIFWSCWRRRPILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGII 774
L + IF + P++Y +LF +GHPEVYILILP FG+ S + T KR F +I
Sbjct: 259 LDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTST-FAGKRLFGHHSMI 317
Query: 775 YA 780
YA
Sbjct: 318 YA 319
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 315 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 37.9 bits (84), Expect = 0.29
Identities = 25/69 (36%), Positives = 30/69 (43%)
Frame = +1
Query: 76 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 255
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 256 DFDSYPPPL 282
F PP L
Sbjct: 91 SFWLLPPSL 99
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 48.0 bits (109), Expect = 3e-04
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHI--IFTRK 738
P+L+QH F F+ HP VY+L+LP FGI S + ++ RK
Sbjct: 254 PVLFQHFFWFYSHPAVYVLVLPVFGIFSELFPVYARK 290
Score = 36.7 bits (81), Expect = 0.66
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 253 IDF 261
F
Sbjct: 123 AAF 125
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 47.6 bits (108), Expect = 4e-04
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
P+L+QH F F+ HP VYI++LP +IS ++ RK
Sbjct: 247 PVLFQHFFWFYSHPAVYIMVLPAMAVISEVVCAFSRK 283
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 253 IDFDSY 270
+ F Y
Sbjct: 123 LSFYVY 128
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYA 780
++Y +LF +GHPEVYIL+LP FGI S ++ T KR F +IYA
Sbjct: 274 MMYLNLFWAWGHPEVYILVLPAFGIFSEVVST-FAGKRLFGHKSMIYA 320
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 46.4 bits (105), Expect = 8e-04
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFT 732
P+L+QHLF FGHPEVYI+ LP G+++ ++ T
Sbjct: 270 PLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPT 302
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 631 RPILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
RP+L+QHLF F HP VY+++LP GI+S + T R+
Sbjct: 263 RPLLWQHLFWMFAHPWVYVVVLPAMGIVSDALPTFCRR 300
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFT 732
+L+ HLF FFGHPEVYIL+ P G ++ +I T
Sbjct: 237 LLWDHLFWFFGHPEVYILLFPALGAMADVIST 268
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +1
Query: 631 RPILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
+P+L+QHLF F+ HP VYI++LP G++S ++ RK
Sbjct: 279 QPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSCMCRK 316
Score = 35.1 bits (77), Expect = 2.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 109 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHII 726
+L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 245 LLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
P+L+QHLF FGHPEVYI+ LP + + I+ T R+
Sbjct: 270 PLLWQHLFWIFGHPEVYIIFLPLIALAAMIVPTAARQ 306
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHII 726
+L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 245 LLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
+LY +LF +GHPEVY ++LP FG IS II T K
Sbjct: 292 MLYTNLFWIWGHPEVYFVVLPAFGFISEIIPTFAEK 327
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
+LY +L +GHPEVYILILP FGI S II + K F + +IYA +
Sbjct: 268 MLYINLIWAWGHPEVYILILPSFGIFSEII-SYICVKSVFSYISLIYATI 316
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHII--FTRKRKKRNFWLL 765
+L+ HLF FFGHPEVYI+ P G+++ FT +R W +
Sbjct: 251 LLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRRLVGRKWFI 295
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAIL 786
P+LYQ F F+ HP VY+++LP GI + + T RK F ++Y++L
Sbjct: 246 PVLYQQFFWFYSHPAVYVMLLPYLGIGAEVASTMARKPL-FGYRVMVYSML 295
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKKRNFWLLGIIYAI 783
P++YQ++F F+ HP VY+ +LP FG S II R+ F +++A+
Sbjct: 184 PLIYQNIFWFYSHPVVYVQVLPVFGFYSEIIPVFARRPL-FGYTSMVFAV 232
Score = 41.5 bits (93), Expect = 0.023
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 85 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSW 60
Score = 37.5 bits (83), Expect = 0.38
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFGPAGGGDQ-FYINI 652
AGA+T+L D+ L T+FF PA GGD Y NI
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNI 190
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 43.2 bits (97), Expect = 0.008
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 643 YQHLF*FFGHPEVYILILPGFGIISHIIFT 732
+ ++F FGHPEVYILILP FG+ S I T
Sbjct: 295 FLNMFWLFGHPEVYILILPAFGVYSEIFST 324
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 43.2 bits (97), Expect = 0.008
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRK 744
P+L+Q F F+ HP VY+++LP GI++ + T RK
Sbjct: 238 PVLFQQFFWFYSHPTVYVMLLPYLGILAEVASTFARK 274
Score = 36.3 bits (80), Expect = 0.87
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNA 111
Query: 253 IDF 261
+
Sbjct: 112 FSY 114
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHII--FTRK 738
PI Y HLF F HPEVY+L++P G++ ++ F+RK
Sbjct: 230 PIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPRFSRK 266
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 40.3 bits (90), Expect = 0.053
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFG 708
+++++LF +FGHPEVY+L+LPG G
Sbjct: 258 LMWENLFWYFGHPEVYLLLLPGTG 281
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
Score = 37.1 bits (82), Expect = 0.50
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 637 ILYQHLF*FFGHPEVYILILPGFGIISHIIFTRKRKK 747
+ YQ+LF F+ HP VY++ LP ++ I+ T R +
Sbjct: 229 LTYQNLFWFYSHPAVYVIFLPFMAMVFEIVATFARNR 265
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 34.3 bits (75), Expect = 3.5
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGFGIISHII 726
P+ Y F F HPEVY+ ILP F I I+
Sbjct: 321 PLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.1 bits (72), Expect = 8.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 634 PILYQHLF*FFGHPEVYILILPGF 705
P+L + LF FFGHP VY +LP +
Sbjct: 210 PLLARTLFWFFGHPVVYFWLLPAY 233
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,281,087
Number of Sequences: 1657284
Number of extensions: 10079304
Number of successful extensions: 21939
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 20949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21889
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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