Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021692
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     24   1.6  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   2.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   6.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   6.4  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 505 LLSCRDYSXXXXXXTTCFSW 564
           LLSC+D+       TT  SW
Sbjct: 18  LLSCKDFDTLYRDCTTASSW 37


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/52 (23%), Positives = 21/52 (40%)
 Frame = +1

Query: 493 NYPYLLSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFWSCWRRRPILYQ 648
           +Y + + C D +      ++      Y I    + K  +FW+CW      YQ
Sbjct: 73  DYIHNVDCGDRTQLEPPISSPHCERLYGIF-ADESKCDVFWNCWNGEASRYQ 123


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/52 (23%), Positives = 21/52 (40%)
 Frame = +1

Query: 493 NYPYLLSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFWSCWRRRPILYQ 648
           +Y + + C D +      ++      Y I    + K  +FW+CW      YQ
Sbjct: 73  DYIHNVDCGDRTQLEPPISSPHCERLYGIF-ADESKCDVFWNCWNGEASRYQ 123


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 783 YSINYS*QPKVSFFPLSCENNMRNY 709
           +S+    +P  S FP S  NN  NY
Sbjct: 48  FSLPLDLEPLPSLFPFSPCNNTANY 72


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 6   IIFYFWYLIRNNWNIF 53
           I+  FWY +  + NIF
Sbjct: 262 IVVIFWYTVNASTNIF 277


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 6   IIFYFWYLIRNNWNIF 53
           I+  FWY +  + NIF
Sbjct: 262 IVVIFWYTVNASTNIF 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,524
Number of Sequences: 336
Number of extensions: 2569
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)