Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021690
(673 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB74AD Cluster: PREDICTED: similar to Nopp140 CG... 46 0.001
UniRef50_Q9VNX6 Cluster: CG7421-PA, isoform A; n=3; Drosophila m... 40 0.072
UniRef50_A0DAF8 Cluster: Chromosome undetermined scaffold_43, wh... 40 0.072
UniRef50_Q54IE8 Cluster: Putative uncharacterized protein irlE; ... 37 0.39
UniRef50_O74350 Cluster: Bromodomain protein; n=1; Schizosacchar... 37 0.39
UniRef50_A0BRG1 Cluster: Chromosome undetermined scaffold_122, w... 36 0.67
UniRef50_A0NJ37 Cluster: Putative uncharacterized protein; n=1; ... 36 0.89
UniRef50_Q9XJE6 Cluster: Replication initiation protein; n=13; r... 36 1.2
UniRef50_Q22GG3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q4Q3B3 Cluster: Putative uncharacterized protein; n=3; ... 35 1.6
UniRef50_Q24IJ8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_A2EU63 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_A2DXH5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_A0Y514 Cluster: DNA-binding protein, H-NS family; n=2; ... 34 2.7
UniRef50_O45751 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_A0BZE2 Cluster: Chromosome undetermined scaffold_139, w... 34 2.7
UniRef50_Q58242 Cluster: Uncharacterized protein MJ0832 [Contain... 34 3.6
UniRef50_UPI00006CB352 Cluster: Viral A-type inclusion protein r... 33 4.8
UniRef50_Q6GNV8 Cluster: MGC80840 protein; n=2; Xenopus|Rep: MGC... 33 4.8
UniRef50_O01465 Cluster: Groundhog (Hedgehog-like family) protei... 33 4.8
UniRef50_A0CQM3 Cluster: Chromosome undetermined scaffold_24, wh... 33 4.8
UniRef50_UPI00006CDA37 Cluster: hypothetical protein TTHERM_0040... 33 6.3
UniRef50_A1RJL3 Cluster: Cointegrate resolution protein T; n=4; ... 33 6.3
UniRef50_Q4N8W5 Cluster: Putative uncharacterized protein; n=2; ... 33 6.3
UniRef50_A2DVP9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
UniRef50_A0IR38 Cluster: Exonuclease SbcC; n=2; Enterobacteriace... 33 8.3
UniRef50_A2FWY2 Cluster: Putative uncharacterized protein; n=2; ... 33 8.3
UniRef50_A0CH96 Cluster: Chromosome undetermined scaffold_18, wh... 33 8.3
UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7; Mollicut... 33 8.3
>UniRef50_UPI0000DB74AD Cluster: PREDICTED: similar to Nopp140
CG7421-PB, isoform B; n=1; Apis mellifera|Rep:
PREDICTED: similar to Nopp140 CG7421-PB, isoform B -
Apis mellifera
Length = 685
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 90 QADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEV 257
+ V++LV+ YL K D SLA+ F KKTKA K T+LD+ + + ++ K V
Sbjct: 6 ELSVSALVYDYLLKKDASLAKVFQKKTKAPTLPKGAPTILDVYQHYQKTSQKKLNV 61
>UniRef50_Q9VNX6 Cluster: CG7421-PA, isoform A; n=3; Drosophila
melanogaster|Rep: CG7421-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 720
Score = 39.5 bits (88), Expect = 0.072
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +3
Query: 81 TEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVP 260
T++ +++V +YL+ DK+LA+ F +KTKA AK+ L +I+ +F Q K+ ++P
Sbjct: 2 TDLLKIADAIVLEYLQSKDKNLAKVFQQKTKAASVAKSSPKLSEIL-QFYQ-TKSPKKIP 59
Query: 261 VTRA 272
+A
Sbjct: 60 AIKA 63
>UniRef50_A0DAF8 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 903
Score = 39.5 bits (88), Expect = 0.072
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Frame = +3
Query: 123 LEKIDKSLAQTFMK----KTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPLR 290
L K+ L QT + +T A+ +AK Q LL NQ + E+P AK++ +
Sbjct: 135 LPKLQGQLTQTQQELQAAQTDAQLQAKRYQDLLAKKQPENQKGDEQLEIPQEEAKQLKQQ 194
Query: 291 NQQFK-QMGKFQQLRKK--LKVQIL--VAPMMSHQNRHLSPTKQLKNLTLHQLRNKNHQM 455
NQ+F+ + +Q +K+ L++Q L + R + +QL+N+ Q++++ +Q+
Sbjct: 195 NQEFQTNLQNLEQEKKQNALELQKLQQAKDEIDSLQREKNLAEQLQNILQEQVKDQQNQI 254
Query: 456 T 458
T
Sbjct: 255 T 255
>UniRef50_Q54IE8 Cluster: Putative uncharacterized protein irlE; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein irlE - Dictyostelium discoideum
AX4
Length = 1350
Score = 37.1 bits (82), Expect = 0.39
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = +3
Query: 48 ILDKNFKMN-LTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAK 224
+LD N L + I D L + L +K L++ +K+ K + KN++ LLD + K
Sbjct: 696 LLDGTINSNILNSMIIKDKEKLDLKELFFKEKPLSEAELKE-KFEIATKNEKELLDQLKK 754
Query: 225 FNQANKAKAEVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTK 404
N A K K + + KK +NQQ +Q K Q ++K + Q + +++N+H+ +
Sbjct: 755 ENDAEKLKKK---NKLKKQ--KNQQQQQQAKQQAQQQKQQHQQNI--QQNYENQHIEDQR 807
Query: 405 QLKNLT 422
+ T
Sbjct: 808 KFNQQT 813
>UniRef50_O74350 Cluster: Bromodomain protein; n=1;
Schizosaccharomyces pombe|Rep: Bromodomain protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 299
Score = 37.1 bits (82), Expect = 0.39
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 54 DKNFKMNLTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQ 233
D + + NL ++ DV + + ++ +K L + + KAK +A Q L+ K +
Sbjct: 73 DNDARKNLRKRLRNDVLKDLAEEIQGCEKKLESLYEEVAKAKAKAVEDQLALEEADK--E 130
Query: 234 ANKAKAEVPVTRAKK 278
A KAK E PV A K
Sbjct: 131 AKKAKTEAPVEAANK 145
>UniRef50_A0BRG1 Cluster: Chromosome undetermined scaffold_122,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_122,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1949
Score = 36.3 bits (80), Expect = 0.67
Identities = 27/116 (23%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +3
Query: 114 HQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPLRN 293
+QYL+K L + KK + KP+ + L I K +ANK E + +++
Sbjct: 452 NQYLQKKISILEEELSKKKQPKPQKQQPDRDLQ-IQKLTEANKRYLEENLKLFEEIRQLR 510
Query: 294 QQFKQMGKFQQLRKKLKVQILVAPMMSHQ-NRHLSPTKQLKNLTLHQLRNKNHQMT 458
++F Q K ++Q +++HQ + + +Q+ NL + +++ K ++T
Sbjct: 511 EKFDYSSVLQNSMKDSQIQ---ENVVNHQLEQQIERMQQIHNLEIQKMKKKIEKLT 563
>UniRef50_A0NJ37 Cluster: Putative uncharacterized protein; n=1;
Oenococcus oeni ATCC BAA-1163|Rep: Putative
uncharacterized protein - Oenococcus oeni ATCC BAA-1163
Length = 307
Score = 35.9 bits (79), Expect = 0.89
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Frame = +3
Query: 6 VVYTVEAGNKEIH*ILDKNFKMNLTTEIQADVNSLVH-----QYLEKIDKSLA--QTFMK 164
+ Y++ G K I +F +N+ + + ++ + + + K K LA Q F K
Sbjct: 57 ISYSINGGKKHSVRIRSNSFAINIPSSNKEQKVTIYNGNVSAKIVVKASKQLADYQKFAK 116
Query: 165 KTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPL-RNQQFKQMGKFQQLRKKL 341
K A + II K N+ KA+ T A+ + R +Q + K ++L++
Sbjct: 117 KYNQSLIASSLPK--SIIKKANELKKAQVAKQTTAAEIARMSRTEQLQLEEKNKELQQDA 174
Query: 342 K-VQILVAPMMSHQNRHLSPTKQLKNLTLHQLRNKNHQMTATV 467
K VQ A S L P K+LKN + + NKN+ + V
Sbjct: 175 KEVQAATAKSKSENKDKLLP-KKLKNAIKNAVSNKNYIIRVNV 216
>UniRef50_Q9XJE6 Cluster: Replication initiation protein; n=13;
root|Rep: Replication initiation protein - Lactococcus
lactis bacteriophage Tuc2009
Length = 260
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +3
Query: 96 DVNSLVHQYLEKIDKSLAQTFMKKTKAK---PRAKNQQTLLDIIAKFNQANKAKAEVPVT 266
D+NSL+ +YL+ + ++ K+ A+ + +++ +I N K E P
Sbjct: 165 DINSLLSEYLDSFIEFSSKNIAKRAMAQVEFMKLSSEEKKQAVIGAKNYFEWYKQENPED 224
Query: 267 RAKKMPLRNQQFKQMGKFQQLRKKLKVQ 350
+ KK + + F + F+ ++K+KV+
Sbjct: 225 KTKKFSINSYAFLESATFKSFQQKVKVK 252
>UniRef50_Q22GG3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 753
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 114 HQYLEKI--DKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPL 287
HQ+ E++ +K + +++ K K +N + I K NQA+K E +K+
Sbjct: 279 HQHYEQVKSEKEAIKAMLQEQKKKEEIENVTYVKKIKKKLNQASKKIQEQKYQDVEKIIE 338
Query: 288 RNQQFKQMGKFQQLRKKLKVQ 350
R QQ Q+ + ++L ++K+Q
Sbjct: 339 RYQQEIQLEEQRKLENQIKIQ 359
>UniRef50_Q4Q3B3 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 692
Score = 35.1 bits (77), Expect = 1.6
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +3
Query: 186 AKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAP 365
A+ Q+ L I + ++A KA +V V A+ PL+ + Q LR +LK L P
Sbjct: 115 AQQQEPSLQIDQRASEAFKASCKVAV-EARVAPLQQE-------LQGLRHRLKALTLSRP 166
Query: 366 MMSHQNRHLSPTKQLKNLTLHQLRN 440
SH NRH+ + N + +R+
Sbjct: 167 YSSHYNRHVRSSSVASNSSALTMRD 191
>UniRef50_Q24IJ8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1501
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +3
Query: 126 EKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPLRNQQFK 305
+K++ Q ++ ++ + +++ + + FN N K + T K Q +K
Sbjct: 650 QKLNTEGNQRQPQRNSSQKQLSSEKNVHNNAQNFNNKNMQKQQAFSTVTDKKANEQQTYK 709
Query: 306 QMGKFQQLRKKLKVQILVAPMMSHQNR 386
QMG QQ +K + Q+L S+QN+
Sbjct: 710 QMGYQQQQQKDINSQLLQKKGSSYQNQ 736
>UniRef50_A2EU63 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1707
Score = 35.1 bits (77), Expect = 1.6
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +3
Query: 123 LEKIDKSL-AQTFMKKTKAKPR-AKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPLRNQ 296
++KI K + T ++ + KP N+Q + D++AK +N+ K E+ KK L NQ
Sbjct: 776 IDKILKEIETNTNNQEKEEKPNDVYNKQKINDLVAKEEFSNQTKTEI----IKKDELSNQ 831
Query: 297 QFKQMGKFQQLRKKLKVQILVAPMMSHQNR 386
Q ++ K +L + K +I+ +S+Q +
Sbjct: 832 QKPEIIKKDELSNQQKPEIIKKEELSNQTK 861
>UniRef50_A2DXH5 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 403
Score = 34.7 bits (76), Expect = 2.1
Identities = 26/115 (22%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = +3
Query: 120 YLEKIDKSLAQTFMK----KTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPL 287
YL ++ + LA T+ + + K + K +II K N+ K + E ++ +++ +
Sbjct: 78 YLRELIRKLATTYQECVDLQKKYQEAKKGAGNSAEIITKQNEDLKIEIESLTSKLQELEV 137
Query: 288 RNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQLRNKNHQ 452
+ Q +Q K + K+ +++ L + + QN H + Q+++L L+N Q
Sbjct: 138 QKQSKEQSLKSKVSSKQNQLKALNDSITNLQNAHRELSNQVEDLKSTVLKNTGRQ 192
>UniRef50_A0Y514 Cluster: DNA-binding protein, H-NS family; n=2;
Alteromonadales|Rep: DNA-binding protein, H-NS family -
Alteromonadales bacterium TW-7
Length = 100
Score = 34.3 bits (75), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 150 QTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEV-PVTRAKKMPLRNQQFKQMGKFQQ 326
+ F+K K QQ + D I+K+ Q KAK EV + + K + L + Q K +
Sbjct: 5 RAFIKTASLTELEKAQQLVTDAISKYTQQQKAKQEVLDLLKEKGLTLEDLQDTSADKRTK 64
Query: 327 LRKKLKVQI 353
++ K ++++
Sbjct: 65 VKAKYRIEV 73
>UniRef50_O45751 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 482
Score = 34.3 bits (75), Expect = 2.7
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Frame = +3
Query: 90 QADVNSLVHQYLEKIDKS-LAQTFMKKTKAKPRAKNQQTLLDIIA-----KFNQANKAKA 251
+ D + QY+ K+ K+ A++F KK KA+ + + + +I A K + +A
Sbjct: 246 EEDRDQFHFQYMRKVLKTDEAESFAKKLKAEKVERLDKKIDEIKARKIDEKLIEREIVRA 305
Query: 252 EVPVTRAKKMPLRNQQF---KQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLK 413
E P K LR ++F ++ K + +KLKV PM+SH + + K K
Sbjct: 306 ESPKFEPKTRRLRVEKFFNQQKQKKENEWMEKLKVDASRKPMLSHWDLEMKNIKAEK 362
>UniRef50_A0BZE2 Cluster: Chromosome undetermined scaffold_139,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_139,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 250
Score = 34.3 bits (75), Expect = 2.7
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +3
Query: 54 DKNFKMN-LTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFN 230
D + N +++ IQ +N + K +Q K +K KP Q+ LLD +
Sbjct: 112 DSQYNSNKVSSYIQEKINEKSNY--TKTTTGESQDDEKSSKQKPSIIYQKQLLDKDLQIM 169
Query: 231 QANKAKAEVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSP 398
Q K ++ + K + + K + + Q+L+ ++++Q + ++HQ +SP
Sbjct: 170 QLQKELKQIKESNKKYQNIEKEYDKLLQENQKLKLQIQLQQVQITQLTHQQSLISP 225
>UniRef50_Q58242 Cluster: Uncharacterized protein MJ0832 [Contains:
Mja rnr-1 intein; Mja rnr-2 intein]; n=2;
Methanococcales|Rep: Uncharacterized protein MJ0832
[Contains: Mja rnr-1 intein; Mja rnr-2 intein] -
Methanococcus jannaschii
Length = 1750
Score = 33.9 bits (74), Expect = 3.6
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = +3
Query: 96 DVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAK 275
++ +V+ L+KIDK +A+ + K R ++ F++ AKA + T A
Sbjct: 64 ELKDIVYNVLKKIDKDVAENYRNGIILKVRTSEKE-----FESFDKEKIAKALIRETGAD 118
Query: 276 KMPLRNQQFKQMGKFQQLRKKLKVQILVAPMM 371
+ R K + ++ KKLKV+ L APM+
Sbjct: 119 EETAR----KIADEVERELKKLKVKYLTAPMI 146
>UniRef50_UPI00006CB352 Cluster: Viral A-type inclusion protein
repeat containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Viral A-type inclusion protein repeat
containing protein - Tetrahymena thermophila SB210
Length = 3714
Score = 33.5 bits (73), Expect = 4.8
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Frame = +3
Query: 93 ADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRA 272
AD + +++ +++ID+ L Q + + + Q L+D I + ++A + A
Sbjct: 598 ADKENEIYEKMQEIDQ-LRQISSNDLEIQQLKEENQNLIDQINQLHEAQQTLA------- 649
Query: 273 KKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQL--KNLTLHQLRNKN 446
+ N Q + Q + + VQ ++ Q R+ K++ KN+ +HQ K
Sbjct: 650 ----IHNVQINDELRRLQQQSSVNVQQIIIEKTQIQERYTYILKEIEEKNIIIHQYEEKE 705
Query: 447 HQMTATVMMMLRQ 485
Q A VM +Q
Sbjct: 706 DQYQAEVMNFTKQ 718
>UniRef50_Q6GNV8 Cluster: MGC80840 protein; n=2; Xenopus|Rep:
MGC80840 protein - Xenopus laevis (African clawed frog)
Length = 664
Score = 33.5 bits (73), Expect = 4.8
Identities = 16/53 (30%), Positives = 35/53 (66%)
Frame = +3
Query: 84 EIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANK 242
+++ D ++ +Y ++ K++ ++ KK +AKPR++N TL+D+ N++NK
Sbjct: 383 QVKGDAKNI--RYRDEATKNVIES--KKPEAKPRSQNLDTLIDVRNTSNKSNK 431
>UniRef50_O01465 Cluster: Groundhog (Hedgehog-like family) protein
9; n=2; Caenorhabditis|Rep: Groundhog (Hedgehog-like
family) protein 9 - Caenorhabditis elegans
Length = 588
Score = 33.5 bits (73), Expect = 4.8
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 162 KKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKM 281
+ T KP A +Q T+LD + + Q NK +PV R KK+
Sbjct: 370 ESTTIKPNAVSQPTILDFVERSKQQNKL-MRIPVYRGKKL 408
>UniRef50_A0CQM3 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_24, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1305
Score = 33.5 bits (73), Expect = 4.8
Identities = 25/123 (20%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +3
Query: 84 EIQADVNSLVHQYLEK---IDKSLAQTFMKKTKAKPRAKN-QQTLLDIIAKFNQANKAKA 251
E+ ++ V+QY E+ + +SL Q +++ + + + ++T + + + Q N
Sbjct: 849 ELNENLEDKVNQYSEQNIQLKRSLEQLDLERDEVQNQLDEVRETNISLQQQIKQMNN--- 905
Query: 252 EVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQ 431
E+ ++K + + + QQL +KL+ QI + ++N ++ T Q+K H+
Sbjct: 906 EIQKQQSKLSEVSTKGERGYEAAQQLEEKLRDQIYKNQKLQNENDNVKYTLQIKEKEFHE 965
Query: 432 LRN 440
+++
Sbjct: 966 MKS 968
>UniRef50_UPI00006CDA37 Cluster: hypothetical protein
TTHERM_00402000; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00402000 - Tetrahymena
thermophila SB210
Length = 868
Score = 33.1 bits (72), Expect = 6.3
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +3
Query: 48 ILDKNFKMNLTTEI-QADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAK 224
I+D+ K+N T++ Q + Y K+++ F+++ + K K T+ DI+AK
Sbjct: 74 IMDEQSKLNRLTQLDQTKRQEEIQDYYSKLER-----FVQQNQDKLDHKLGTTIQDILAK 128
Query: 225 FNQANKAKAEVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTK 404
FN+ E+ + K N ++ + Q++ + +I+ + + +LS
Sbjct: 129 FNKMEDTFLELFKQKEKLFERMNLGYEHLFSNQEIIESTIKKIIYT--LDRKADNLSVRT 186
Query: 405 QLKNLTL 425
LKN+ +
Sbjct: 187 YLKNIKI 193
>UniRef50_A1RJL3 Cluster: Cointegrate resolution protein T; n=4;
Shewanella|Rep: Cointegrate resolution protein T -
Shewanella sp. (strain W3-18-1)
Length = 390
Score = 33.1 bits (72), Expect = 6.3
Identities = 22/101 (21%), Positives = 44/101 (43%)
Frame = +3
Query: 144 LAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPLRNQQFKQMGKFQ 323
LAQ ++ + + ++ L I + Q + + E+ + L +Q + + + +
Sbjct: 74 LAQRLQEEAMQRIKTTEERHHLVIAERQRQLDVLRQELMAISEHRDKLEHQHREALAQIE 133
Query: 324 QLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQLRNKN 446
+L+ L M+ +NRHLS T Q K + L K+
Sbjct: 134 ELKHARHEDALQLSSMTSENRHLSGTIQDKEKHIQSLEEKH 174
>UniRef50_Q4N8W5 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 543
Score = 33.1 bits (72), Expect = 6.3
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 228 NQANKAKAEVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSP-TK 404
N +N ++ +P + +FK + F+ LRK +V +V +S +N LSP
Sbjct: 315 NNSNNIESHIPTISNLLEKVNWDKFKSLSSFKDLRKMNQVLTIVGDHLSSENCRLSPLPN 374
Query: 405 QLKNLTLHQLRN 440
L NL N
Sbjct: 375 DLINLITQSCSN 386
>UniRef50_A2DVP9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 889
Score = 33.1 bits (72), Expect = 6.3
Identities = 23/101 (22%), Positives = 43/101 (42%)
Frame = +3
Query: 153 TFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPLRNQQFKQMGKFQQLR 332
T + KA P+ + Q + I F N A + + + NQQ + + Q +
Sbjct: 293 TIQQPFKATPQQNSNQNAVIISPAFTMQNAAIQAQALNGSAQTFNNNQQNQVVSNLQNIP 352
Query: 333 KKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQLRNKNHQM 455
K++ Q P + Q +P+KQ ++ Q NK++ +
Sbjct: 353 KQISQQQAPTPQPTPQKAPGAPSKQQAQVSTPQNINKSNPL 393
>UniRef50_A0IR38 Cluster: Exonuclease SbcC; n=2;
Enterobacteriaceae|Rep: Exonuclease SbcC - Serratia
proteamaculans 568
Length = 1083
Score = 32.7 bits (71), Expect = 8.3
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Frame = +3
Query: 84 EIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLD-----IIAKFNQANKAK 248
E+Q +S QY ++ +L Q +++++ +A Q L+ + A+ Q N +
Sbjct: 374 ELQQACDSAAQQYAQQ-KTALEQLEVQRSQLTAQAGQHQEKLNGLTAALTAQQQQQNTLE 432
Query: 249 AEVP--VTR------AKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTK 404
A+ P V R A+ P+R Q F F Q+ ++L+ Q +HQ + K
Sbjct: 433 AQSPLMVLRQRQTELAELRPVRQQLFTLSSLFSQVSERLEQQR--REFAAHQTQLGEHEK 490
Query: 405 QLKNLTLHQLRNKNHQMTATVMMMLRQ 485
QL+ + KNHQ + L Q
Sbjct: 491 QLEETRQQYKQQKNHQADVEKALELEQ 517
>UniRef50_A2FWY2 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1357
Score = 32.7 bits (71), Expect = 8.3
Identities = 27/114 (23%), Positives = 57/114 (50%)
Frame = +3
Query: 126 EKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPLRNQQFK 305
EKI S +++ ++ +++ Q +L+I ++ +++ E V K M +K
Sbjct: 1165 EKISISDTILSLRRQISQIKSEVSQNILEIKSEISKSRNGLRERIVFILKLM------YK 1218
Query: 306 QMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQLRNKNHQMTATV 467
+ L+K ++ + + +SHQN L N+T++QL ++N+ M AT+
Sbjct: 1219 YKNQIVSLKKSIEEKNSIIYELSHQNNTL-------NMTINQLSSQNNSMNATI 1265
>UniRef50_A0CH96 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 759
Score = 32.7 bits (71), Expect = 8.3
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 240 KAKAEVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNL 419
K E + + +++ N+ FK + Q + +++ L A ++ H+ + TKQL+
Sbjct: 79 KKDIENYLEQIQELETENKMFKLFIQQQDEETRNEIEKLNATILKHEQ---TITKQLEQF 135
Query: 420 TLHQLRNKNHQMT 458
L Q +N +HQ+T
Sbjct: 136 NLEQKKNSDHQIT 148
>UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7;
Mollicutes|Rep: 30S ribosomal protein S8 - Mycoplasma
pneumoniae
Length = 142
Score = 32.7 bits (71), Expect = 8.3
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = +3
Query: 168 TKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKMPLRNQQF--KQ--MGKFQQLRK 335
T KP + + D++ K N A KAK T A K+ + + K+ + FQ L
Sbjct: 3 TTTKPIKAHFDPVADLLTKINNARKAKLMTVTTIASKLKIAILEILVKEGYLANFQVLEN 62
Query: 336 KLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQLR 437
K K + +V + + R + +K ++ LR
Sbjct: 63 KSKTKRIVTFNLKYTQRRIPSINGVKQISKPGLR 96
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,844,288
Number of Sequences: 1657284
Number of extensions: 7483330
Number of successful extensions: 24454
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 23491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24396
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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