Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021690
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81115-5|CAB03295.1|  482|Caenorhabditis elegans Hypothetical pr...    34   0.080
U97012-3|AAK39144.2|  588|Caenorhabditis elegans Groundhog (hedg...    33   0.14 
Z46241-5|CAA86321.1|  279|Caenorhabditis elegans Hypothetical pr...    31   0.99 
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z82278-6|CAB05258.1|  690|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z93396-3|CAB07712.1|  597|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z81115-5|CAB03295.1|  482|Caenorhabditis elegans Hypothetical
           protein T05D4.5 protein.
          Length = 482

 Score = 34.3 bits (75), Expect = 0.080
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
 Frame = +3

Query: 90  QADVNSLVHQYLEKIDKS-LAQTFMKKTKAKPRAKNQQTLLDIIA-----KFNQANKAKA 251
           + D +    QY+ K+ K+  A++F KK KA+   +  + + +I A     K  +    +A
Sbjct: 246 EEDRDQFHFQYMRKVLKTDEAESFAKKLKAEKVERLDKKIDEIKARKIDEKLIEREIVRA 305

Query: 252 EVPVTRAKKMPLRNQQF---KQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLK 413
           E P    K   LR ++F   ++  K  +  +KLKV     PM+SH +  +   K  K
Sbjct: 306 ESPKFEPKTRRLRVEKFFNQQKQKKENEWMEKLKVDASRKPMLSHWDLEMKNIKAEK 362


>U97012-3|AAK39144.2|  588|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 9 protein.
          Length = 588

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 162 KKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKKM 281
           + T  KP A +Q T+LD + +  Q NK    +PV R KK+
Sbjct: 370 ESTTIKPNAVSQPTILDFVERSKQQNKL-MRIPVYRGKKL 408


>Z46241-5|CAA86321.1|  279|Caenorhabditis elegans Hypothetical
           protein C38D4.7 protein.
          Length = 279

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 25/120 (20%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
 Frame = +3

Query: 105 SLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDI-IAKFNQANKAK-AEVPVTRAKK 278
           +LVH  +E++D+S A ++    +  P + + +    +  A   Q+N AK    PV  AK+
Sbjct: 136 ALVHSLVERVDRSHASSYDVVGQKNPSSSSLKPAKRVKSAVVRQSNLAKRTGAPVDAAKE 195

Query: 279 M-PLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLHQLRNKNHQM 455
           +  +R+++ +  G+  + R  + +  ++    S  ++ L   K  +  T +++     Q+
Sbjct: 196 LKKIRDEENRNHGRSAE-RDNVFIGAVLVGKGSQYDKDLEKFKSFRCRTCNEVSQTKEQL 254


>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical protein
            T23F2.2b protein.
          Length = 1538

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 29/129 (22%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
 Frame = +3

Query: 81   TEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANK----AK 248
            +++Q+ VN   H   +   +++ +   K    KP  KN++T+++  A F++  +     K
Sbjct: 810  SQLQSRVN---HSQRDVECQAIPRQINKYVGCKPNVKNKETIIEKGALFDENEERLRICK 866

Query: 249  AEVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLH 428
            AE+  TR +++ +  Q+   + + QQ  +K+K +I V   +   N++   T+ L++  + 
Sbjct: 867  AELETTR-RQVTVLQQKLVSIIQ-QQSSQKIKKRIAV---VEDSNKNTVHTEDLES-KMK 920

Query: 429  QLRNKNHQM 455
            ++  KN ++
Sbjct: 921  EVELKNTEL 929


>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical protein
            T23F2.2a protein.
          Length = 1534

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 29/129 (22%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
 Frame = +3

Query: 81   TEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQANK----AK 248
            +++Q+ VN   H   +   +++ +   K    KP  KN++T+++  A F++  +     K
Sbjct: 810  SQLQSRVN---HSQRDVECQAIPRQINKYVGCKPNVKNKETIIEKGALFDENEERLRICK 866

Query: 249  AEVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTKQLKNLTLH 428
            AE+  TR +++ +  Q+   + + QQ  +K+K +I V   +   N++   T+ L++  + 
Sbjct: 867  AELETTR-RQVTVLQQKLVSIIQ-QQSSQKIKKRIAV---VEDSNKNTVHTEDLES-KMK 920

Query: 429  QLRNKNHQM 455
            ++  KN ++
Sbjct: 921  EVELKNTEL 929


>Z82278-6|CAB05258.1|  690|Caenorhabditis elegans Hypothetical
           protein M162.7 protein.
          Length = 690

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 246 KAEVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQ 350
           K   P+ + +K+P   + FK++ KF +LRK L  Q
Sbjct: 216 KMSEPLEQLQKLPSVFEPFKEVSKFMRLRKTLPHQ 250


>Z93396-3|CAB07712.1|  597|Caenorhabditis elegans Hypothetical
           protein ZC15.5 protein.
          Length = 597

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +3

Query: 48  ILDKNFKMNLTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQ 197
           I + NF+  ++ E  + +   +HQ  EK+ +    TF + T+  P  +N+
Sbjct: 269 IEEDNFESTISIEKCSKLGIFLHQNAEKLARCQVDTFQRITRDLPPFRNK 318


>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
            H06O01.2 protein.
          Length = 1461

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +3

Query: 129  KIDKSLA---QTFMKKTKAKPRAKNQQTLLDIIAKFNQANKAKAEVPVTRAKK 278
            K+D +L    + F+K    KP+ KN Q  +D + K    +K K      R +K
Sbjct: 1180 KMDPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMSKDKVKTTEKKERKRK 1232


>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical
           protein F43C1.1 protein.
          Length = 1036

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +2

Query: 593 RFHKNQLLHLPNFQ-SNQL 646
           R H NQL+H+P F+ SNQL
Sbjct: 587 RAHSNQLVHVPEFRASNQL 605


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,539,988
Number of Sequences: 27780
Number of extensions: 191434
Number of successful extensions: 675
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)