Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021689
(703 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 35 0.003
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 33 0.007
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 30 0.081
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 28 0.25
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 28 0.33
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 27 0.43
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 27 0.57
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 27 0.76
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 27 0.76
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 26 1.00
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 26 1.00
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 26 1.00
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 25 1.7
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 2.3
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 25 2.3
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 3.0
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 4.0
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 24 4.0
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 24 4.0
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 24 5.3
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 7.0
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 23 9.3
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 34.7 bits (76), Expect = 0.003
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 560 VDGQPMKVQLSTSRVRQRPGMG-DPEQCYRCGRGGHWSKEC 679
+DG +K+ S+VR P + +CYRC GHW+ +C
Sbjct: 635 LDGTKIKLGFCVSKVRAAPPTPRERVRCYRCLELGHWAHDC 675
Score = 23.4 bits (48), Expect = 7.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 638 CYRCGRGGHWSKEC 679
C RCG GH +K C
Sbjct: 685 CIRCGVVGHMAKVC 698
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 33.5 bits (73), Expect = 0.007
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 566 GQPMKVQLSTSRVRQRPGMGDPEQ-CYRCGRGGHWSKEC 679
GQ + V S +++ P + +Q CYRC GH ++EC
Sbjct: 339 GQKLTVSCCISNIKEAPAINLQQQRCYRCLERGHIAREC 377
Score = 25.8 bits (54), Expect = 1.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 638 CYRCGRGGHWSKEC 679
C RCG GH +K+C
Sbjct: 387 CIRCGAEGHLAKDC 400
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 0.081
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 560 VDGQPMKVQLSTSRVRQRPGMGDPE-QCYRCGRGGHWSKEC 679
+DG +++ SRV+ P +CYRC GH +++C
Sbjct: 524 LDGTKLRLGFCISRVKMAPPTPKEHLRCYRCLEHGHNARDC 564
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 28.3 bits (60), Expect = 0.25
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 635 QCYRCGRGGHWSKECPKRWGPDR 703
+C++C GH+S++C GPDR
Sbjct: 417 RCFKCWETGHFSRDCK---GPDR 436
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 27.9 bits (59), Expect = 0.33
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 581 VQLSTSRVRQRPG-MGDPEQCYRCGRGGHWSKEC 679
+ S+ +VR+ P + +C+RC GH +EC
Sbjct: 216 IGFSSCKVREAPKPSAESRRCFRCLERGHMVREC 249
Score = 23.0 bits (47), Expect = 9.3
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +2
Query: 602 VRQRPGMGDPEQCYRCGRGGHWSKEC 679
VR+ G C RCG H + C
Sbjct: 246 VRECQGTNRSSLCIRCGAANHKAVNC 271
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 27.5 bits (58), Expect = 0.43
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 593 TSRVRQRPGMGDPEQCYRCGRGGHWSKEC 679
+S + P D ++CYRC GH +++C
Sbjct: 375 SSIMEAMPVSVDRQRCYRCLERGHLARDC 403
Score = 27.5 bits (58), Expect = 0.43
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 632 EQCYRCGRGGHWSKEC 679
+ C RCG GH++K C
Sbjct: 411 QACIRCGADGHYAKSC 426
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 27.1 bits (57), Expect = 0.57
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 617 GMGDPEQCYRCGRGGHWSKECP 682
G + C +CG+ GH +ECP
Sbjct: 345 GQDRSKLCIKCGQEGHKIRECP 366
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 26.6 bits (56), Expect = 0.76
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 638 CYRCGRGGHWSKECP 682
C+RC + GH ++CP
Sbjct: 204 CHRCRKPGHMKRDCP 218
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 26.6 bits (56), Expect = 0.76
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 524 VNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKRWGPDR 703
+N ++ + + G+ +KV S +R+ + + ++CY+C + GH S C + PDR
Sbjct: 243 INVSLPDFQSFLNLGK-LKVGWSICHIRE---VMEEQKCYKCWKVGHTSYHCRE---PDR 295
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 26.2 bits (55), Expect = 1.00
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 584 QLSTSRVRQRPGMGDPEQCYRCGRGGHWSKEC 679
++ RV + P C+ CG+ GH ++C
Sbjct: 58 KVQEERVLKAKSESKPGACFFCGQPGHKKRDC 89
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 26.2 bits (55), Expect = 1.00
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 575 MKVQLSTSRVRQRPGMG-DPEQCYRCGRGGHWSKEC 679
+KV + V++ P + +CYRC GH S++C
Sbjct: 384 LKVLYTMCAVKEAPHTPIEKLRCYRCLERGHVSRDC 419
Score = 23.0 bits (47), Expect = 9.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 638 CYRCGRGGHWSKEC 679
C RCG GH + C
Sbjct: 429 CIRCGTSGHLAATC 442
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 26.2 bits (55), Expect = 1.00
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 635 QCYRCGRGGHWSKECPKRWGPDR 703
+CYRC + H S++C GPDR
Sbjct: 430 RCYRCWQTDHISQDC---CGPDR 449
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 25.4 bits (53), Expect = 1.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 701 GRGPSASGTPWTSGPRGHSGSTARG 627
GR PSA+GT T+ HS + G
Sbjct: 21 GRSPSAAGTATTTTSPSHSNAAKMG 45
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 686 ASGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPS 576
A G+ +G S ++ GR P+AAG ++TT+PS
Sbjct: 2 AHGSLTVAGMMVKSEASQTGRS-PSAAGTATTTTSPS 37
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSG 642
P SG P GPRG++G
Sbjct: 189 PGLSGLPGNPGPRGYAG 205
Score = 24.6 bits (51), Expect = 3.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 686 ASGTPWTSGPRGHSGSTARGRP 621
A+GT T+GP+G G RG P
Sbjct: 294 ATGTTTTTGPKGEKGD--RGEP 313
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 701 GRGPSASGTPWTSGPRGHSG 642
G G G P GPRG+ G
Sbjct: 404 GGGEGRPGAPGPKGPRGYEG 423
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3
Query: 653 GHSGSTARGRPCPAAAGHDSSTTAPSWA 570
G+ + CPA G + S T P W+
Sbjct: 14 GNKSTAGTSSCCPAGTGLNGSGTEPGWS 41
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.6 bits (51), Expect = 3.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 680 GTPWTSGPRGHSGSTARGRPCPAAAGHDSSTT 585
G SGP+G +G GRP P D T
Sbjct: 332 GLEGPSGPKGDAGVPGYGRPGPQGEKGDIGLT 363
Score = 23.4 bits (48), Expect = 7.0
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTA-RGRP-CPAAAGH 600
P G P GP+G G RG P P + G+
Sbjct: 106 PGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGY 138
Score = 23.0 bits (47), Expect = 9.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 680 GTPWTSGPRGHSGSTARGRP 621
G P GP GH G A GRP
Sbjct: 161 GEPGPKGPAGHPG--APGRP 178
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 24.2 bits (50), Expect = 4.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 160 SSSGTFLIKPQKPI--LDRYSKNTVRS*NAISSEL-RFRAHGKRTSRPRTIQNLNGELVH 330
+S G+FL + P+ Y +NT + + R+++H KRTS+ I+N + H
Sbjct: 3070 NSLGSFLSYLRIPLDWFLNYHENTPEGEQVHDNTIQRYKSHYKRTSKHSMIENCY-PVTH 3128
Query: 331 GQ 336
G+
Sbjct: 3129 GE 3130
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 24.2 bits (50), Expect = 4.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 635 QCYRCGRGGHWSKEC 679
QCYRC GH + C
Sbjct: 213 QCYRCYEYGHTAARC 227
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 24.2 bits (50), Expect = 4.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 638 CYRCGRGGHWSKEC 679
C RCG GH +++C
Sbjct: 500 CIRCGSEGHKARDC 513
Score = 23.0 bits (47), Expect = 9.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 632 EQCYRCGRGGHWSKEC 679
++CYRC GH + C
Sbjct: 475 QRCYRCLERGHLAHAC 490
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 262 TVILTISHSTTVPYFSNSGLRSASVV 185
TVIL+ + +TV +F+ SGL S +++
Sbjct: 385 TVILSNNRLSTVDHFTFSGLNSLALL 410
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.4 bits (48), Expect = 7.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 638 CYRCGRGGHWSKEC 679
C+ C R GH ++EC
Sbjct: 377 CFNCLRKGHSAREC 390
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.0 bits (47), Expect = 9.3
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 596 SRVRQRPGMGDPEQ-CYRCGRGGHWSKEC 679
S+VR P Q C+RC GH + C
Sbjct: 493 SKVRAAPPTPPERQRCFRCLEMGHIASNC 521
Score = 23.0 bits (47), Expect = 9.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 638 CYRCGRGGHWSKEC 679
C RCG GH ++ C
Sbjct: 531 CIRCGLTGHKARSC 544
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,433
Number of Sequences: 2352
Number of extensions: 16456
Number of successful extensions: 81
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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