Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021689
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 58 5e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 58 5e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 58 5e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 58 5e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 58 5e-09
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 58 5e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 58 5e-09
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 53 2e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 41 0.001
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 41 0.001
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 40 0.002
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 39 0.003
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 39 0.003
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 37 0.012
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 36 0.021
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 36 0.021
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 36 0.028
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 36 0.028
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 36 0.028
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 36 0.028
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 36 0.037
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 36 0.037
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 36 0.037
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 36 0.037
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 36 0.037
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 36 0.037
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 35 0.065
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 34 0.086
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 34 0.086
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 34 0.086
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 34 0.086
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.086
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.086
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.086
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 34 0.11
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 33 0.15
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 33 0.15
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 33 0.15
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.20
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 33 0.20
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 33 0.20
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 33 0.20
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 33 0.26
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.26
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.26
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.26
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 33 0.26
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 32 0.35
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 32 0.46
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 32 0.46
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 31 0.60
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 31 0.60
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.80
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 31 0.80
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 31 1.1
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 31 1.1
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 31 1.1
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 31 1.1
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 31 1.1
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 31 1.1
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 31 1.1
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 31 1.1
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 31 1.1
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 31 1.1
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 1.4
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 1.8
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 1.8
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.8
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.8
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 1.8
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 1.8
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 29 2.4
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 29 2.4
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 29 2.4
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 29 2.4
AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical ... 29 2.4
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 3.2
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 3.2
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 3.2
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 3.2
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 29 4.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 4.3
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 29 4.3
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 29 4.3
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 29 4.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 4.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 4.3
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 28 5.6
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 28 5.6
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 28 5.6
AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical... 28 5.6
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 28 7.4
U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter... 28 7.4
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 28 7.4
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 28 7.4
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie... 28 7.4
CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical ... 28 7.4
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 28 7.4
U55857-11|AAA98036.1| 153|Caenorhabditis elegans Hypothetical p... 27 9.8
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 27 9.8
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 27 9.8
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 27 9.8
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-----ITVSCTWKT---NKSAANHSES 311
K+F+G + + E D R LFEKYG+V C+I+R + C + T K A +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 312 *RRVSSWAGDQNRSGQEP-EGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
+ G + +P + + K+F+G L+ K +RE+F KFG + +C ++R
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 489 N 491
+
Sbjct: 176 D 176
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 327 SWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
S A D + S P P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 36 STAADNDVS-PSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-----ITVSCTWKT---NKSAANHSES 311
K+F+G + + E D R LFEKYG+V C+I+R + C + T K A +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 312 *RRVSSWAGDQNRSGQEP-EGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
+ G + +P + + K+F+G L+ K +RE+F KFG + +C ++R
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 489 N 491
+
Sbjct: 176 D 176
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 327 SWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
S A D + S P P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 36 STAADNDVS-PSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-----ITVSCTWKT---NKSAANHSES 311
K+F+G + + E D R LFEKYG+V C+I+R + C + T K A +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 312 *RRVSSWAGDQNRSGQEP-EGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
+ G + +P + + K+F+G L+ K +RE+F KFG + +C ++R
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 489 N 491
+
Sbjct: 176 D 176
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 327 SWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
S A D + S P P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 36 STAADNDVS-PSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-----ITVSCTWKT---NKSAANHSES 311
K+F+G + + E D R LFEKYG+V C+I+R + C + T K A +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 312 *RRVSSWAGDQNRSGQEP-EGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
+ G + +P + + K+F+G L+ K +RE+F KFG + +C ++R
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 489 N 491
+
Sbjct: 176 D 176
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 327 SWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
S A D + S P P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 36 STAADNDVS-PSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-----ITVSCTWKT---NKSAANHSES 311
K+F+G + + E D R LFEKYG+V C+I+R + C + T K A +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 312 *RRVSSWAGDQNRSGQEP-EGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
+ G + +P + + K+F+G L+ K +RE+F KFG + +C ++R
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 489 N 491
+
Sbjct: 176 D 176
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 327 SWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
S A D + S P P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 36 STAADNDVS-PSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-----ITVSCTWKT---NKSAANHSES 311
K+F+G + + E D R LFEKYG+V C+I+R + C + T K A +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 312 *RRVSSWAGDQNRSGQEP-EGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
+ G + +P + + K+F+G L+ K +RE+F KFG + +C ++R
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 489 N 491
+
Sbjct: 176 D 176
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 327 SWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
S A D + S P P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 36 STAADNDVS-PSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-----ITVSCTWKT---NKSAANHSES 311
K+F+G + + E D R LFEKYG+V C+I+R + C + T K A +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 312 *RRVSSWAGDQNRSGQEP-EGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
+ G + +P + + K+F+G L+ K +RE+F KFG + +C ++R
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 489 N 491
+
Sbjct: 176 D 176
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 327 SWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
S A D + S P P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 36 STAADNDVS-PSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 387 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHL 509
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH+
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHI 43
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 521 DVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 685
DV+ I L G +DG+ + ++ STS++R PGM P +C+RC H + +CP+
Sbjct: 47 DVDPIITRLTGYTIDGKVVNIKKSTSKLRPTPGM--PNRCFRCQSDEHRTPQCPQ 99
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
K+F+GNL D L+ +F+ + V ECDIV+
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVK 36
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 387 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHL 509
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH+
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHI 43
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 521 DVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 685
DV+ I L G +DG+ + ++ STS++R PGM P +C+RC H + +CP+
Sbjct: 47 DVDPIITRLTGYTIDGKVVNIKKSTSKLRPTPGM--PNRCFRCQSDEHRTPQCPQ 99
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
K+F+GNL D L+ +F+ + V ECDIV+
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVK 36
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 41.9 bits (94), Expect = 4e-04
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 22/142 (15%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RITVSCTWKTNKSAANHSES*R 317
+F+ NL T+ L LF + G V++ I+ V + + A S + R
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNGR 101
Query: 318 RVS------SWAGDQNRSGQEPEGPSTPTT-KIFVGNLTDKTRAPEVRELFQKFGTVVEC 476
+ +WA + G+ P T +FVG+L + + ++RE F KFG V E
Sbjct: 102 ELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEA 161
Query: 477 DIVRN--------YGFVHLTRR 518
I+R+ YGFV RR
Sbjct: 162 KIIRDNNTNKGKGYGFVSYPRR 183
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 147 RTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
R F +F+G+L + LR F K+G V E I+R
Sbjct: 130 RHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIR 165
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-----ITVSCTWKT--NKSAANHSES* 314
K+F+G + E DLR LFE++G + E I++ + C + T ++ +A ++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 315 RRVSSWAGDQNRSGQ-EP----EGPSTP-----TTKIFVGNLTDKTRAPEVRELFQKFGT 464
NR+ Q +P P++P K+F+G L+ + EVR LF FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 465 VVECDIVR 488
+ E ++R
Sbjct: 150 LDEVTVLR 157
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR-----ITVSCTWKT--NKSAANHSES* 314
K+F+G + E DLR LFE++G + E I++ + C + T ++ +A ++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 315 RRVSSWAGDQNRSGQ-EP----EGPSTP-----TTKIFVGNLTDKTRAPEVRELFQKFGT 464
NR+ Q +P P++P K+F+G L+ + EVR LF FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 465 VVECDIVR 488
+ E ++R
Sbjct: 150 LDEVTVLR 157
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
+++GN+S +TT+ADLR LF YG + E I +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFK 270
Score = 38.3 bits (85), Expect = 0.005
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 26/148 (17%)
Frame = +3
Query: 153 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRIT----------VSCTWKTNKSAA-- 296
F +F+G+LS + L+ F K+G V E ++R VS K N A
Sbjct: 135 FHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIA 194
Query: 297 --NHSES*RRV--SSWAG----DQNRSG----QEPEGPSTPTTKIFVGNLTDKTRAPEVR 440
N +R ++WA ++NR Q T ++VGN++ +T ++R
Sbjct: 195 GMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 254
Query: 441 ELFQKFGTVVECDI--VRNYGFVHLTRR 518
+LF +G + E I + Y FV ++
Sbjct: 255 DLFSTYGDIAEVRIFKTQRYAFVRYEKK 282
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 363 PEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLTRRA 521
P+ T ++FVGNL ++ + E++ELF G + EC + + + F+ L RA
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRA 161
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVEC 242
++F+GNL ++ E +L+ LF +G + EC
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAEC 145
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 363 PEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLTRRA 521
P+ T ++FVGNL ++ + E++ELF G + EC + + + F+ L RA
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRA 161
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVEC 242
++F+GNL ++ E +L+ LF +G + EC
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAEC 145
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 363 PEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLTRRA 521
P+ T ++FVGNL ++ + E++ELF G + EC + + + F+ L A
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLISNA 161
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVEC 242
++F+GNL ++ E +L+ LF +G + EC
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAEC 145
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 36.3 bits (80), Expect = 0.021
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 141 GHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRITVSCTWKTNKSAANHSES*RR 320
G+ KIF+G +S + DL F +YG V + + + + + +
Sbjct: 25 GNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCK 84
Query: 321 VSSWAGDQNRSGQEPE---GPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 467
++ A +Q G+ E S K+FVG L ++R F++FG V
Sbjct: 85 LALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 36.3 bits (80), Expect = 0.021
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 141 GHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRITVSCTWKTNKSAANHSES*RR 320
G+ KIF+G +S + DL F +YG V + + + + + +
Sbjct: 25 GNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCK 84
Query: 321 VSSWAGDQNRSGQEPE---GPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 467
++ A +Q G+ E S K+FVG L ++R F++FG V
Sbjct: 85 LALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 291 AANHSES*RRVSSWAGDQNRSGQEP------EGPSTPTTKIFVGNLTDKTRAPEVRELFQ 452
A + ++S R S +G++ R +EP + T +FVGN+ + E+R +F+
Sbjct: 131 AQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFE 190
Query: 453 KFGTVVECDI 482
+ G V E DI
Sbjct: 191 EHGKVEEVDI 200
Score = 33.1 bits (72), Expect = 0.20
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Frame = +3
Query: 150 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI-VRITVSCTW------KTNKSAANHSE 308
T +F+GN+ E ++R +FE++G V E DI I + +++ +E
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 309 S*RRVSSWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECD 479
R G + + G G S + ++FVG L +++ F +FG V D
Sbjct: 228 EQDRPIRAGGSRMKIGY---GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 291 AANHSES*RRVSSWAGDQNRSGQEP------EGPSTPTTKIFVGNLTDKTRAPEVRELFQ 452
A + ++S R S +G++ R +EP + T +FVGN+ + E+R +F+
Sbjct: 131 AQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFE 190
Query: 453 KFGTVVECDI 482
+ G V E DI
Sbjct: 191 EHGKVEEVDI 200
Score = 33.1 bits (72), Expect = 0.20
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Frame = +3
Query: 150 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI-VRITVSCTW------KTNKSAANHSE 308
T +F+GN+ E ++R +FE++G V E DI I + +++ +E
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 309 S*RRVSSWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECD 479
R G + + G G S + ++FVG L +++ F +FG V D
Sbjct: 228 EQDRPIRAGGSRMKIGY---GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 291 AANHSES*RRVSSWAGDQNRSGQEP------EGPSTPTTKIFVGNLTDKTRAPEVRELFQ 452
A + ++S R S +G++ R +EP + T +FVGN+ + E+R +F+
Sbjct: 108 AQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFE 167
Query: 453 KFGTVVECDI 482
+ G V E DI
Sbjct: 168 EHGKVEEVDI 177
Score = 33.1 bits (72), Expect = 0.20
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Frame = +3
Query: 150 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI-VRITVSCTW------KTNKSAANHSE 308
T +F+GN+ E ++R +FE++G V E DI I + +++ +E
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 309 S*RRVSSWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECD 479
R G + + G G S + ++FVG L +++ F +FG V D
Sbjct: 205 EQDRPIRAGGSRMKIGY---GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 35.9 bits (79), Expect = 0.028
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 608 QRPGMGDPEQCYRCGRGGHWSKECP 682
QR G G CY CG GH+S++CP
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDCP 83
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 611 RPGMGDPEQCYRCGRGGHWSKECPK 685
R G G CY C GH+S++CPK
Sbjct: 28 RRGGGGGSTCYNCQETGHFSRDCPK 52
Score = 32.3 bits (70), Expect = 0.35
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 632 EQCYRCGRGGHWSKEC 679
++CY CGR GH S+EC
Sbjct: 107 QKCYNCGRSGHISREC 122
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 596 SRVRQRPGMGDPEQCYRCGRGGHWSKECPKR 688
SR G + ++CY+C GH S++CP +
Sbjct: 119 SRECTESGSAEEKRCYQCQETGHISRDCPSQ 149
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +3
Query: 276 KTNKSAANHSES*RRVSSWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQK 455
+T+ H E+ R+++ + D + Q+P K+F+G L+ +T A +R+ F +
Sbjct: 17 ETSPPVDGHEEA--RLNADSDDGSHGSQDPG-------KMFIGGLSWQTTAENLRDYFGR 67
Query: 456 FGTVVECDIVRN 491
FG V EC ++R+
Sbjct: 68 FGEVNECMVMRD 79
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 147 RTFKIFIGNLSDKTTEADLRPLFEKYGTV 233
+T K+FIG LS +T D++ FE YG V
Sbjct: 132 KTKKVFIGGLSATSTLEDMKQYFETYGKV 160
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 35.5 bits (78), Expect = 0.037
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 28/146 (19%)
Frame = +3
Query: 147 RTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRITVSCTWKTNK--SAANHSES*RR 320
R F +F+G+LS + LR F+ +G V + ++R T + K S E+ R
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 321 V--------------SSWA----GDQNRSGQEPEGP--------STPTTKIFVGNLTDKT 422
+ ++WA GDQ + E S T ++VGN+ T
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLT 139
Query: 423 RAPEVRELFQKFGTVVECDIVRNYGF 500
E+R+ F FG + E I + G+
Sbjct: 140 E-DEIRQGFASFGRITEVRIFKMQGY 164
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 35.5 bits (78), Expect = 0.037
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 28/146 (19%)
Frame = +3
Query: 147 RTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRITVSCTWKTNK--SAANHSES*RR 320
R F +F+G+LS + LR F+ +G V + ++R T + K S E+ R
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 321 V--------------SSWA----GDQNRSGQEPEGP--------STPTTKIFVGNLTDKT 422
+ ++WA GDQ + E S T ++VGN+ T
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLT 149
Query: 423 RAPEVRELFQKFGTVVECDIVRNYGF 500
E+R+ F FG + E I + G+
Sbjct: 150 E-DEIRQGFASFGRITEVRIFKMQGY 174
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 35.5 bits (78), Expect = 0.037
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 28/146 (19%)
Frame = +3
Query: 147 RTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRITVSCTWKTNK--SAANHSES*RR 320
R F +F+G+LS + LR F+ +G V + ++R T + K S E+ R
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 321 V--------------SSWA----GDQNRSGQEPEGP--------STPTTKIFVGNLTDKT 422
+ ++WA GDQ + E S T ++VGN+ T
Sbjct: 193 IEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLT 252
Query: 423 RAPEVRELFQKFGTVVECDIVRNYGF 500
E+R+ F FG + E I + G+
Sbjct: 253 E-DEIRQGFASFGRITEVRIFKMQGY 277
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 35.5 bits (78), Expect = 0.037
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 28/146 (19%)
Frame = +3
Query: 147 RTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRITVSCTWKTNK--SAANHSES*RR 320
R F +F+G+LS + LR F+ +G V + ++R T + K S E+ R
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 321 V--------------SSWA----GDQNRSGQEPEGP--------STPTTKIFVGNLTDKT 422
+ ++WA GDQ + E S T ++VGN+ T
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLT 220
Query: 423 RAPEVRELFQKFGTVVECDIVRNYGF 500
E+R+ F FG + E I + G+
Sbjct: 221 E-DEIRQGFASFGRITEVRIFKMQGY 245
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +3
Query: 276 KTNKSAANHSES*RRVSSWAGDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQK 455
+T+ H E+ R+++ + D + Q+P K+F+G L+ +T A +R+ F +
Sbjct: 17 ETSPPVDGHEEA--RLNADSDDGSHGSQDPG-------KMFIGGLSWQTTAENLRDYFGR 67
Query: 456 FGTVVECDIVRN 491
FG V EC ++R+
Sbjct: 68 FGEVNECMVMRD 79
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 147 RTFKIFIGNLSDKTTEADLRPLFEKYGTV 233
+T K+FIG LS +T D++ FE YG V
Sbjct: 132 KTKKVFIGGLSATSTLEDMKQYFETYGKV 160
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.065
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 171 NLSDKTTEADLRPLFEKYGTVVECDIV 251
NLS TTE DLR +F ++G + +CD+V
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLV 108
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 336 GDQNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 485
G + R+ Q P+ + V NL+ T ++R++F +FG + +CD+V
Sbjct: 59 GGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLV 108
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 34.7 bits (76), Expect = 0.065
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 611 RPGMGDPEQCYRCGRGGHWSKECPKRWG 694
R G G P C+ C GH S+ CPK+ G
Sbjct: 161 RRGRGGPGHCFHCQEHGHISRMCPKKVG 188
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.086
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Frame = +3
Query: 369 GPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLTR 515
GP P ++ V N+ + R P+++ +F+KFG V + +I+ N +GFV + R
Sbjct: 148 GPDGPK-RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMER 201
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 251
++ + N+ + + DL+ +FEK+G V + +I+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEII 185
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.086
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Frame = +3
Query: 369 GPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLTR 515
GP P ++ V N+ + R P+++ +F+KFG V + +I+ N +GFV + R
Sbjct: 148 GPDGPK-RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMER 201
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 251
++ + N+ + + DL+ +FEK+G V + +I+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEII 185
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 34.3 bits (75), Expect = 0.086
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 608 QRPGMGDPEQCYRCGRGGHWSKECPKR 688
+R M E C RC GHW ECP R
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECPTR 683
Score = 31.1 bits (67), Expect = 0.80
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 629 PEQCYRCGRGGHWSKECPK 685
P C+ CG GH SKEC K
Sbjct: 569 PRGCHNCGEEGHISKECDK 587
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 34.3 bits (75), Expect = 0.086
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 608 QRPGMGDPEQCYRCGRGGHWSKECPKR 688
+R M E C RC GHW ECP R
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECPTR 683
Score = 31.1 bits (67), Expect = 0.80
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 629 PEQCYRCGRGGHWSKECPK 685
P C+ CG GH SKEC K
Sbjct: 569 PRGCHNCGEEGHISKECDK 587
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.086
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 153 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.086
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 153 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 34.3 bits (75), Expect = 0.086
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 153 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 33.9 bits (74), Expect = 0.11
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Frame = +3
Query: 183 KTTEADLRPLFEKYGTVVECDIVR-----------ITVSCTWKTNKSAA--NHSES*RRV 323
KTT+ + FE GTVV C+I R + +S + NK A H RR
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRC 242
Query: 324 SSWAGDQNRSGQEPEG-PSTPTTKIFVGNLTDKTRAPEVRELF 449
D G++ +G PS ++IFVG LTDK ++R++F
Sbjct: 243 DVKVPD----GRDKQGRPS--ISRIFVGRLTDKVDEHQLRKVF 279
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 605 RQRPGMGDPEQCYRCGRGGHWSKECPKR 688
R+RP P QC+ CG GH S CPKR
Sbjct: 603 RERP----PPQCFTCGEMGHISTYCPKR 626
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 363 PEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 497
P G S K++VGNL R EV ++F K+G + DI G
Sbjct: 2 PRGGSEDQ-KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRG 45
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 141 GHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 248
G K+++GNL E ++ +F KYG + DI
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI 40
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 363 PEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 497
P G S K++VGNL R EV ++F K+G + DI G
Sbjct: 2 PRGGSEDQ-KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRG 45
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 141 GHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 248
G K+++GNL E ++ +F KYG + DI
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI 40
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Frame = +3
Query: 378 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLTRRA 521
T TKIFVG L T + E F++FG + E ++ R YGFV + RA
Sbjct: 32 TMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRA 87
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 123 PII*NAGHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 251
P++ + KIF+G L T++ L FE++G + E ++
Sbjct: 25 PVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVI 67
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 150 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 251
T ++F+ NL T E DL+ LF+KYG V E +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 150 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 248
T ++ + NL TE LR FEKYG + + +
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASL 34
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 342 QNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
+N SG P KIFVG LT T +RE + +FG + + ++R+
Sbjct: 9 ENGSGDASLEPEN-LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRIT----------VSCTWKTNKSAANHS 305
KIF+G L+ TT+ +R + ++G + + ++R V+ + KT AA
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 306 ES*RRVSSWAGDQNRS----GQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 473
+ D R+ + + T +++V + + + E F K+GTV +
Sbjct: 84 RP-HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 474 CDIV 485
+I+
Sbjct: 143 SEII 146
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 342 QNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
+N SG P KIFVG LT T +RE + +FG + + ++R+
Sbjct: 9 ENGSGDASLEPEN-LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRIT----------VSCTWKTNKSAANHS 305
KIF+G L+ TT+ +R + ++G + + ++R V+ + KT AA
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 306 ES*RRVSSWAGDQNRS----GQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 473
+ D R+ + + T +++V + + + E F K+GTV +
Sbjct: 84 RP-HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 474 CDIV 485
+I+
Sbjct: 143 SEII 146
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 342 QNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
+N SG P KIFVG LT T +RE + +FG + + ++R+
Sbjct: 9 ENGSGDASLEPEN-LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRIT----------VSCTWKTNKSAANHS 305
KIF+G L+ TT+ +R + ++G + + ++R V+ + KT AA
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 306 ES*RRVSSWAGDQNRS----GQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 473
+ D R+ + + T +++V + + + E F K+GTV +
Sbjct: 84 RP-HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 474 CDIV 485
+I+
Sbjct: 143 SEII 146
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 32.7 bits (71), Expect = 0.26
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 12/115 (10%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFE-----KYGTVVECDIVRITVSCTWKTNKSAANHSES*RRV 323
IF+ NL TTE ++R E ++ D+V + N A + RV
Sbjct: 595 IFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQQALLKDRV 654
Query: 324 SSWAGDQNRSGQEPE---GPSTPTT----KIFVGNLTDKTRAPEVRELFQKFGTV 467
S +PE G TT K+FV N+ + E++ LF KFGTV
Sbjct: 655 PVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGTV 709
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTV 233
K+F+ N+ + T+ +L+ LF K+GTV
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTV 709
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
KI + N+S K T++ L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
K+FIG LS TT+ L F ++G VV+ ++R
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIR 82
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
K+FIG LS TT+ L F ++G VV+ ++R
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIR 102
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
K+FIG LS TT+ L F ++G VV+ ++R
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIR 103
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
+F+ L+ TT+ DL +F ++G + C+IVR
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVR 274
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 381 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
P +FV L T ++ +F +FG + C+IVR+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRD 275
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
+F+ L+ TT+ DL +F ++G + C+IVR
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVR 274
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 381 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
P +FV L T ++ +F +FG + C+IVR+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRD 275
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
+F+ L+ TT+ DL +F ++G + C+IVR
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVR 205
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 381 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
P +FV L T ++ +F +FG + C+IVR+
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRD 206
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +3
Query: 144 HRTFK----IFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
H+T+K I+IG LS +E D+ +F +YG V+ +++R
Sbjct: 31 HQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIR 71
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 357 QEPEGPSTPTTKI-FVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLTRR 518
+EP+ + K+ ++ N+ + ++ ELF+++ ++ V++Y F+H R
Sbjct: 366 EEPDEDTMSKVKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNER 420
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/99 (21%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRITVSCTWK--TNKSAANHSES*RRVSS 329
+I++G++ E L PLFEK G + + ++ +S + + N ++ +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 330 WAGDQNRSGQEPE-GPSTPTTKIFVGNLTDKTRAPEVRE 443
+ G + +G+ + S T++F+GN+ E+ E
Sbjct: 261 YDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILE 299
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = +2
Query: 605 RQRPGM--GDPEQ---CYRCGRGGHWSKECPKR 688
R++PG+ G P C RC + GHW K CP +
Sbjct: 142 RRQPGIMTGPPPPTYTCNRCSQPGHWYKNCPMK 174
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 31.5 bits (68), Expect = 0.60
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +2
Query: 68 LVFIFLTCVIYCYSLYIVTHNLKCRAPY 151
L+F F++C ++ Y++Y+V H + + Y
Sbjct: 104 LIFFFISCTMFLYAVYLVKHETELKIRY 131
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
Frame = +2
Query: 605 RQRPGM--GDPEQ---CYRCGRGGHWSKECP 682
R++PG+ G P C RC + GHW K CP
Sbjct: 142 RRQPGIMTGPPPPTYTCNRCSQPGHWYKNCP 172
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRPCPA 612
P +G GP GH GS+ GRP PA
Sbjct: 223 PGPAGPRGAPGPAGHPGSSGGGRPGPA 249
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 578 KVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 685
+V + R G P CY+C GH SK+CP+
Sbjct: 293 QVDADDKKKDSRKGNYRPPYCYKCKVVGHVSKDCPQ 328
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 629 PEQCYRCGRGGHWSKECP 682
P C+ CG GH S ECP
Sbjct: 261 PRGCFNCGEQGHRSNECP 278
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 626 DPEQCYRCGRGGHWSKECPKRWGP 697
+P CY C + GH S+EC + P
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP 204
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 626 DPEQCYRCGRGGHWSKECPKRWGP 697
+P CY C + GH S++CP+ P
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKP 303
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 626 DPEQCYRCGRGGHWSKECPKRWGP 697
+P CY C + GH S++CP+ P
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKP 417
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 629 PEQCYRCGRGGHWSKECP 682
P C+ CG GH S ECP
Sbjct: 472 PRGCFNCGEQGHRSNECP 489
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 626 DPEQCYRCGRGGHWSKECPKRWGP 697
+P CY C + GH S++CP+ P
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKP 303
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 626 DPEQCYRCGRGGHWSKECPKRWGP 697
+P CY C + GH S++CP+ P
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKP 417
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 629 PEQCYRCGRGGHWSKECP 682
P C+ CG GH S ECP
Sbjct: 472 PRGCFNCGEQGHRSNECP 489
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
+IF+G TTE +LR FEK+ V + +V+
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVK 99
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
+IFVG T E+RE F+KF V + +V++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKS 100
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 165 IGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
I NLS +TT DLR FE+YG + + I R
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPR 52
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 165 IGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
I NLS +TT DLR FE+YG + + I R
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPR 52
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 629 PEQCYRCGRGGHWSKECP 682
P C+ CG GH S ECP
Sbjct: 261 PRGCFNCGEQGHRSNECP 278
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 626 DPEQCYRCGRGGHWSKECPKRWGP 697
+P CY C + GH S+EC + P
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP 204
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 629 PEQCYRCGRGGHWSKECP 682
P C+ CG GH S ECP
Sbjct: 261 PRGCFNCGEQGHRSNECP 278
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 626 DPEQCYRCGRGGHWSKECPKRWGP 697
+P CY C + GH S+EC + P
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP 204
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 626 DPEQCYRCGRGGHWSKECPKRWGP 697
+P CY C + GH S++CP+ P
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKP 303
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 626 DPEQCYRCGRGGHWSKECPKRWGP 697
+P CY C + GH S++CP+ P
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKP 417
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 629 PEQCYRCGRGGHWSKECP 682
P C+ CG GH S ECP
Sbjct: 472 PRGCFNCGEQGHRSNECP 489
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 156 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 254
+IF+G TTE +LR FEK+ V + +V+
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVK 100
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 491
+IFVG T E+RE F+KF V + +V++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKS 101
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 506 FDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 685
+D D DA++ L+G + G +V+LST + R G G GRGG P
Sbjct: 46 YDDVRDAEDAVRALDGSRICGVRARVELSTGQRRGGGGRGGGFG----GRGGGGRDRSPY 101
Query: 686 R 688
R
Sbjct: 102 R 102
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
K++VG L + E+ E+F +FG + + + R
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR 36
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 506 FDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 625
+D D DA++ L+G + G +V+LST + R G G
Sbjct: 46 YDDVRDAEDAVRALDGSRICGVRARVELSTGQRRGGGGRG 85
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
K++VG L + E+ E+F +FG + + + R
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR 36
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 506 FDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMG 625
+D D DA++ L+G + G +V+LST + R G G
Sbjct: 46 YDDVRDAEDAVRALDGSRICGVRARVELSTGQRRGGGGRG 85
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 488
K++VG L + E+ E+F +FG + + + R
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR 36
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 393 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 500
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 393 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 500
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 393 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 500
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 393 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 500
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 701 GRGPSASGTPWTSGPRGHSGSTARGRP-CPAAAGHD 597
G G SA+G P + GP G GS GRP P G D
Sbjct: 114 GCGTSAAGPPGSPGPDGQEGS--NGRPGAPGTNGPD 147
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 387 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 485
T ++V N D + +LF KFG + C+++
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM 185
Score = 28.7 bits (61), Expect = 4.3
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRI 257
+++ N D + L LF K+G + C+++ +
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTV 187
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 387 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 485
T ++V N D + +LF KFG + C+++
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM 182
Score = 28.7 bits (61), Expect = 4.3
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRI 257
+++ N D + L LF K+G + C+++ +
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTV 184
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 387 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 485
T ++V N D + +LF KFG + C+++
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM 245
Score = 28.7 bits (61), Expect = 4.3
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRI 257
+++ N D + L LF K+G + C+++ +
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTV 247
>AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical
protein T27C4.2 protein.
Length = 643
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = -1
Query: 307 SEWFAADLFVFHVHETVILTISHSTTVPYFSNSGLRS 197
S F+A+ F+FHV++T+ + ++ F++S +RS
Sbjct: 477 SSVFSAEPFIFHVNQTINMNSTYGMRFCVFNSSQIRS 513
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPSWAVRRPSY 552
P + G P + G +G G GRP P ++ P R +Y
Sbjct: 240 PGSDGKPGSPGGKGDDGERPLGRPGPRGPPGEAGPEGPQGPTGRDAY 286
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPSWAVRRPSY 552
P + G P + G +G G GRP P ++ P R +Y
Sbjct: 240 PGSDGKPGSPGGKGDDGERPLGRPGPRGPPGEAGPEGPQGPTGRDAY 286
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 695 GPS-ASGTPWTSGPRGHSGSTARGRPCPAAAGHDS 594
GP+ A+G P GP G+ GS P PA D+
Sbjct: 235 GPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDA 269
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 695 GPS-ASGTPWTSGPRGHSGSTARGRPCPAAAGHDS 594
GP+ A+G P GP G+ GS P PA D+
Sbjct: 245 GPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDA 279
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -3
Query: 695 GPSASGTPWTSGPRGHSGST---ARGRPCPAAA 606
GP +GTP T G G++G+ A PCPA A
Sbjct: 239 GPGNAGTPGTPGAPGNAGAPGGDAAYCPCPARA 271
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 579
P +G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 545 LNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 685
L G Q ++ S + + + D CY+CG GH++ C K
Sbjct: 222 LPGQTRQNQDHHHRVDLSLIPDKKNLSDVT-CYKCGEKGHYANRCHK 267
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 579
P +G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 695 GPSASGTPWTSGPRGHSGSTAR-GRPCPAA-AGHDSS 591
GP A G +GP G G+ + G+P PA AG D +
Sbjct: 219 GPGAPGNAGPAGPAGQDGAPGQDGQPGPAGPAGQDGA 255
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 695 GPSASGTPWTSGPRGHSGSTAR-GRPCPAA-AGHDSS 591
GP A G +GP G G+ + G+P PA AG D +
Sbjct: 231 GPGAPGNAGPAGPAGQDGAPGQDGQPGPAGPAGQDGA 267
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 28.7 bits (61), Expect = 4.3
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 635 QCYRCGRGGHWSKECPKR 688
QC++C R GH+ + CP+R
Sbjct: 1356 QCHQCHRIGHFVESCPQR 1373
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 579
P +G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 579
P +G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 251
+F+GN+S +E +R +F K G V+ +V
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMV 50
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRPCPAAA 606
P G P GP G +G+ +G+P P A
Sbjct: 196 PGLPGPPGEDGPVGQNGTRGQGQPGPVGA 224
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 28.3 bits (60), Expect = 5.6
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = -3
Query: 701 GRGPSASGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPSWAVRRPSYRSTL**RRSH 522
G+ GTP P G SG+T+ P A G D +R PS S + H
Sbjct: 380 GQQQPTPGTPHRFAPPGPSGTTSSPHFAPGAPGAD---------LRSPSLMSPNQQSQQH 430
Query: 521 RP--SRQMHEAVVTH---DIALDDRP 459
P R +H + +H IAL +P
Sbjct: 431 TPVLPRSLHNEMTSHGMRPIALPSQP 456
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 28.3 bits (60), Expect = 5.6
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = -3
Query: 701 GRGPSASGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPSWAVRRPSYRSTL**RRSH 522
G+ GTP P G SG+T+ P A G D +R PS S + H
Sbjct: 378 GQQQPTPGTPHRFAPPGPSGTTSSPHFAPGAPGAD---------LRSPSLMSPNQQSQQH 428
Query: 521 RP--SRQMHEAVVTH---DIALDDRP 459
P R +H + +H IAL +P
Sbjct: 429 TPVLPRSLHNEMTSHGMRPIALPSQP 454
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Frame = +3
Query: 342 QNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR-------NYGF 500
Q+ Q+ ++ +FVGN++DK +R++ + G V ++ +GF
Sbjct: 32 QHTPAQQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGF 91
Query: 501 VHLT 512
H T
Sbjct: 92 CHFT 95
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Frame = +3
Query: 342 QNRSGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR-------NYGF 500
Q+ Q+ ++ +FVGN++DK +R++ + G V ++ +GF
Sbjct: 32 QHTPAQQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGF 91
Query: 501 VHLT 512
H T
Sbjct: 92 CHFT 95
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 695 GPSASGTPWTSGPRGHSGSTARGRPCPAAAGH 600
GP G P GP GH G P P GH
Sbjct: 180 GPGQPGQPGPHGPNGHPGKPGSQGP-PGPPGH 210
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/38 (23%), Positives = 21/38 (55%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFV 503
+I++G LT + ++ F+ +G + + + +GFV
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFV 41
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/38 (23%), Positives = 21/38 (55%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFV 503
+I++G LT + ++ F+ +G + + + +GFV
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFV 41
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/38 (23%), Positives = 21/38 (55%)
Frame = +3
Query: 390 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFV 503
+I++G LT + ++ F+ +G + + + +GFV
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFV 41
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Frame = +3
Query: 351 SGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHL 509
S ++P IF+ NL V + F FG ++ C + + YGFVH
Sbjct: 133 SQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHF 192
Query: 510 -TRRAM*TTLSK 542
T + T + K
Sbjct: 193 ETEHSAQTAIEK 204
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Frame = +3
Query: 351 SGQEPEGPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFVHL 509
S ++P IF+ NL V + F FG ++ C + + YGFVH
Sbjct: 133 SQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHF 192
Query: 510 -TRRAM*TTLSK 542
T + T + K
Sbjct: 193 ETEHSAQTAIEK 204
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +3
Query: 387 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 485
T ++V N D + ++F KFG + C+++
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVM 245
Score = 27.5 bits (58), Expect = 9.8
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRI 257
+++ N D + L +F K+G + C+++ +
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTV 247
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 159 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 251
+F+G ++ +T+E+ LR FE YG + + +V
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMV 136
>AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical
protein Y17G7B.20 protein.
Length = 294
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 674 PWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPSWAVRRPSYRSTL 540
P++SGP S S+ RGRP + + A ++ ++ + STL
Sbjct: 124 PYSSGPLVKSPSSKRGRPSKVTSNSKMANYARNYREQKKNEMSTL 168
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 584 QLSTSRVRQRPGMG-DPEQCYRCGRGGHWSKECPKR 688
+ +T + + P + D + CY CG H S CP+R
Sbjct: 118 KFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPER 153
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 584 QLSTSRVRQRPGMG-DPEQCYRCGRGGHWSKECPKR 688
+ +T + + P + D + CY CG H S CP+R
Sbjct: 149 KFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPER 184
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 153 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 251
F +++GN +TTE DL F + G V IV
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIV 36
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRPCPAAA 606
P +G P G G G +RG P PA A
Sbjct: 178 PGQAGAPGHPGAPGQGGQRSRGTPGPAGA 206
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAPS 576
PS G P SGP G +G+ A G P P +S+ P+
Sbjct: 183 PSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPA 222
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 286 LFVFHVHETVILTISHSTTVPYFSNS 209
+++ H+H + SH+ +VP+FSNS
Sbjct: 118 VYIVHLHRWNQIPDSHNKSVPHFSNS 143
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 286 LFVFHVHETVILTISHSTTVPYFSNS 209
+++ H+H + SH+ +VP+FSNS
Sbjct: 118 VYIVHLHRWNQIPDSHNKSVPHFSNS 143
>U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 5 protein.
Length = 284
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 680 GTPWTSGPRGHSGSTARGRPCP 615
GTP +GP+G G+ A PCP
Sbjct: 256 GTPGQAGPQGAVGADAEYCPCP 277
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRP 621
P G P +GP G G T +G+P
Sbjct: 187 PGQDGQPGLAGPPGRDGLTGKGQP 210
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 584 QLSTSRVRQRPGMG-DPEQCYRCGRGGHWSKECPKR 688
+ +T + + P + D + CY CG H S CP+R
Sbjct: 149 KFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPER 184
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 584 QLSTSRVRQRPGMG-DPEQCYRCGRGGHWSKECPKR 688
+ +T + + P + D + CY CG H S CP+R
Sbjct: 149 KFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPER 184
>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 2 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 37 VYCVGNSWSLFGVHIFNLCYILLFFV 114
V+C +SLFGVH + ++LFFV
Sbjct: 638 VWCSIGMFSLFGVHATDNAIVVLFFV 663
>CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical
protein C52D10.13 protein.
Length = 281
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSG-STARGRPCPAAAGHDSSTTAPSWAV 567
PS G P GP+G G S A G P PA + P+ V
Sbjct: 139 PSPVGPPGPPGPKGPDGESGAPGEPGPAGRPGNKGAPGPAGPV 181
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 692 PSASGTPWTSGPRGHSGSTARGRP 621
P + G P +GP+GH G R P
Sbjct: 170 PGSPGGPGETGPQGHQGKPGRAGP 193
>U55857-11|AAA98036.1| 153|Caenorhabditis elegans Hypothetical
protein K08D10.11 protein.
Length = 153
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 660 PPRPQR*HCSGSPMPGRCRTRLVDNCTFMGCPSTIIPFNSLIASF 526
PPRP S SP PG R + F G ++ F SLI F
Sbjct: 48 PPRPPSLSASSSPAPGSARKPYFFSIFFRGV--ALMIFCSLICDF 90
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 638 CYRCGRGGHWSKECPKR 688
CY CG+ GH + EC ++
Sbjct: 411 CYYCGKRGHTANECRRK 427
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 593 TSRVRQRPGMGDPEQCYRCGRGGHWSKEC 679
TS + + G G C+ C + GH + EC
Sbjct: 189 TSPILEAKGFGISNTCFNCKKYGHRATEC 217
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 593 TSRVRQRPGMGDPEQCYRCGRGGHWSKEC 679
TS + + G G C+ C + GH + EC
Sbjct: 189 TSPILEAKGFGISNTCFNCKKYGHRATEC 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,228,365
Number of Sequences: 27780
Number of extensions: 358471
Number of successful extensions: 1933
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 1394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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