Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021688
(685 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P35606 Cluster: Coatomer subunit beta'; n=66; Eukaryota... 137 3e-31
UniRef50_O17742 Cluster: Putative uncharacterized protein; n=1; ... 108 1e-22
UniRef50_Q54YD8 Cluster: Putative uncharacterized protein; n=1; ... 99 1e-19
UniRef50_A1DGY5 Cluster: COPI vesicle coat beta' subunit, putati... 97 3e-19
UniRef50_Q1EQ29 Cluster: Beta prime-COP; n=2; Entamoeba histolyt... 91 2e-17
UniRef50_A2X2A5 Cluster: Putative uncharacterized protein; n=5; ... 90 4e-17
UniRef50_Q4Q3L5 Cluster: Beta prime cop protein, putative; n=7; ... 89 7e-17
UniRef50_Q6CB55 Cluster: Yarrowia lipolytica chromosome C of str... 88 2e-16
UniRef50_P41811 Cluster: Coatomer subunit beta'; n=6; Saccharomy... 77 4e-13
UniRef50_O42937 Cluster: Probable coatomer subunit beta'; n=1; S... 77 4e-13
UniRef50_Q6WWJ3 Cluster: COPI protein; n=9; Plasmodium|Rep: COPI... 74 4e-12
UniRef50_Q5CXT5 Cluster: Coatomer complex beta; n=3; Apicomplexa... 74 4e-12
UniRef50_A5E5I5 Cluster: Coatomer beta' subunit; n=5; Saccharomy... 72 1e-11
UniRef50_Q0U6J1 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_A0BJC2 Cluster: Chromosome undetermined scaffold_11, wh... 63 7e-09
UniRef50_A2EQL7 Cluster: WD repeat protein, putative; n=1; Trich... 59 9e-08
UniRef50_A2E6J4 Cluster: WD repeat protein, putative; n=1; Trich... 55 1e-06
UniRef50_A7AQY1 Cluster: Coatomer beta subunit, putative; n=1; B... 55 2e-06
UniRef50_A2DXW1 Cluster: WD repeat protein, putative; n=1; Trich... 47 5e-04
UniRef50_Q4UGX0 Cluster: Beta subunit of coatomer complex, putat... 43 0.006
UniRef50_A0DZB5 Cluster: Chromosome undetermined scaffold_7, who... 42 0.014
UniRef50_Q5VQ77 Cluster: Coatomer protein complex, beta prime su... 35 2.1
UniRef50_Q5U8N1 Cluster: MYST; n=3; Entamoeba histolytica|Rep: M... 34 2.8
UniRef50_A1I9P7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q0IXJ8 Cluster: Os10g0428200 protein; n=3; Oryza sativa... 33 6.5
UniRef50_P19615 Cluster: Major yolk protein precursor; n=10; Euk... 33 6.5
UniRef50_A0CDI7 Cluster: Chromosome undetermined scaffold_17, wh... 33 8.6
UniRef50_Q7SI66 Cluster: Predicted protein; n=1; Neurospora cras... 33 8.6
UniRef50_Q9V0I9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_P35606 Cluster: Coatomer subunit beta'; n=66;
Eukaryota|Rep: Coatomer subunit beta' - Homo sapiens
(Human)
Length = 906
Score = 137 bits (331), Expect = 3e-31
Identities = 70/138 (50%), Positives = 93/138 (67%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
+E++FILKY + V A+ET+ +TEDGIEDAFEV+GE+ E VKTG+WVGDCFIYT+++N
Sbjct: 482 EESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVN 541
Query: 435 RINYYVGGEIVTVAHLDHTMYILG*LLRRTDYXXXXXXXXLFLIHYYYLCWSTRQQ*CGA 614
R+NYYVGGEIVT+AHLD TMY+LG + + D L +I Y L Q A
Sbjct: 542 RLNYYVGGEIVTIAHLDRTMYLLGYIPK--DNRLYLGDKELNIISYSLLVSVLEYQ--TA 597
Query: 615 ILRLPIVSYPQFLPSIDK 668
++R + LP+I K
Sbjct: 598 VMRRDFSMADKVLPTIPK 615
Score = 136 bits (329), Expect = 5e-31
Identities = 57/85 (67%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
DSSEYA E++S VK+FKNFKE+KSFKP++GAE I+GG++LGV+S++G+A FYDW++ E
Sbjct: 399 DSSEYAIRESNSIVKIFKNFKEKKSFKPDFGAESIYGGFLLGVRSVNGLA--FYDWDNTE 456
Query: 181 LVRRIEIQPRHVFWSESGNLVCLAT 255
L+RRIEIQP+H+FWS+SG LVC+AT
Sbjct: 457 LIRRIEIQPKHIFWSDSGELVCIAT 481
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEHR 664
G + K+NRLYL DKELNI EYQTAVMR DF AD+VLPTIP E R
Sbjct: 565 GYIPKDNRLYLGDKELNIISYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQR 618
>UniRef50_O17742 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 368
Score = 108 bits (260), Expect = 1e-22
Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Frame = +3
Query: 231 REPCVFGYDETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDC 410
RE D+++++ KY+A V A T++TEDGIEDAF+V+GE E V+TG W+GDC
Sbjct: 188 REMVAICGDDSFYVFKYSAEAVANA----TEVTEDGIEDAFKVIGEQAEAVETGFWIGDC 243
Query: 411 FIYTN--TLNRINYYVGGEIVTVAHLDHTMYILG 506
FI+T T+NRIN+Y GGEIVTVAH+D + +LG
Sbjct: 244 FIFTTALTINRINHYAGGEIVTVAHVDRPLCLLG 277
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/79 (40%), Positives = 52/79 (65%)
Frame = +1
Query: 13 YATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELVRR 192
+A E++++VK+ KNFK+ KS + + EGI GG +L ++S + F+DWE LVRR
Sbjct: 117 FAVRESATNVKIKKNFKDHKSIRSDMMLEGISGGPLLALRSNDSLC--FFDWESAALVRR 174
Query: 193 IEIQPRHVFWSESGNLVCL 249
IEI + V+WS++ +V +
Sbjct: 175 IEITSKSVYWSDNREMVAI 193
Score = 37.1 bits (82), Expect = 0.40
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFET 625
G +A+++R+Y DK+LN+ EYQTA MR D T
Sbjct: 277 GYMAEDSRVYAVDKDLNVISYELFQSDLEYQTATMRRDIGT 317
>UniRef50_Q54YD8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1005
Score = 98.7 bits (235), Expect = 1e-19
Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
DS +YA E++S +K+FKNFKE SFKP + AEGIFGG +LGVK S FY W+ +
Sbjct: 400 DSGQYAVRESTSRIKIFKNFKETHSFKPSFSAEGIFGGSLLGVK--SNDTLCFYSWDSAD 457
Query: 181 LVRRIE-IQPRHVFWSESGNLVCLATMK 261
++RRIE P+++FWSE+G+ + + T K
Sbjct: 458 IIRRIEKTSPKNIFWSENGDYLAIVTDK 485
Score = 93.9 bits (223), Expect = 3e-18
Identities = 41/83 (49%), Positives = 60/83 (72%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
D++ FIL+Y V + E+ I E GIE+AF+VV E+ +T+ TG+WVGDCFIY N +
Sbjct: 484 DKSTFILRYYKDTVQKYIESGQPIGELGIENAFDVVHEIEDTIGTGLWVGDCFIYINRSS 543
Query: 435 RINYYVGGEIVTVAHLDHTMYIL 503
++NY VG E+VT++HL+ MY+L
Sbjct: 544 KLNYCVGTEVVTISHLEKHMYLL 566
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +2
Query: 515 KENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEHR 664
+ RLYL+DK LNI YQT+++RGD E A+R+LP IP + R
Sbjct: 571 QSGRLYLSDKNLNIVSYKLHISVISYQTSILRGDLEGAERILPKIPQDQR 620
>UniRef50_A1DGY5 Cluster: COPI vesicle coat beta' subunit, putative;
n=23; Eukaryota|Rep: COPI vesicle coat beta' subunit,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 890
Score = 97.5 bits (232), Expect = 3e-19
Identities = 42/88 (47%), Positives = 61/88 (69%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
++T+++L+++ + EDG+E AFEVV +VNE+V+TG WVGDCFIYTN+ N
Sbjct: 518 EDTFYVLRFSKENYINGLNAG-EADEDGVESAFEVVTDVNESVRTGQWVGDCFIYTNSTN 576
Query: 435 RINYYVGGEIVTVAHLDHTMYILG*LLR 518
R+NY VG + T++H D MY+LG L R
Sbjct: 577 RLNYLVGDQTYTISHFDQGMYVLGYLPR 604
Score = 85.8 bits (203), Expect = 9e-16
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKE-RKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHL 177
+S++YA E+ +SVK+FKNFKE + AEG+ GG +LGVK G+ +DWE
Sbjct: 434 NSNDYAIRESPTSVKIFKNFKEVTGGLDVGFQAEGLTGGVLLGVKGQGGIGM--FDWETG 491
Query: 178 ELVRRIEIQPRHVFWSESGNLVCLA 252
LVRRIE++P+ V+WSESG LV LA
Sbjct: 492 NLVRRIEVEPKAVYWSESGELVTLA 516
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTE 658
G + ++ R+YL DK++N+ EYQT V+RGD + A +L +P +
Sbjct: 600 GYLPRDGRIYLADKDVNVVSFGLSLSMVEYQTVVLRGDMDMAAELLKDVPQD 651
>UniRef50_Q1EQ29 Cluster: Beta prime-COP; n=2; Entamoeba
histolytica|Rep: Beta prime-COP - Entamoeba histolytica
Length = 800
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
D++Y+ILKYN+ +V + N + E+G+ +AFEV+ E+ ETVK+G W GD FIY N N
Sbjct: 475 DDSYYILKYNSEMVQQYFNKNKSVPEEGLTEAFEVLSEIPETVKSGNWYGDAFIYINHNN 534
Query: 435 RINYYVGGEIVTVAHLDHTMYILG 506
+ YYVG + HL++ MY+LG
Sbjct: 535 SLCYYVGAFCNIITHLENNMYLLG 558
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVF-KNFKERK-SFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEH 174
D+ YA LE + +VKVF K F+E + + E +GIFGG +L +K G + S Y WE
Sbjct: 392 DNGGYAVLEKNGNVKVFNKQFEEANINIQEEISPDGIFGGNLLTLK--YGDSLSLYTWEG 449
Query: 175 LELVRRIEIQPRHVFWSES 231
+ + I+I ++++WS++
Sbjct: 450 -QFITDIQIVAKNLYWSDT 467
>UniRef50_A2X2A5 Cluster: Putative uncharacterized protein; n=5;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 841
Score = 90.2 bits (214), Expect = 4e-17
Identities = 36/69 (52%), Positives = 53/69 (76%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
D +++ILKYN VV+ + + E+G+EDAFE++ E+NE ++TG+WVGDCFIY N+ +
Sbjct: 499 DTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERIRTGLWVGDCFIYNNSSS 558
Query: 435 RINYYVGGE 461
R+NY VGGE
Sbjct: 559 RLNYCVGGE 567
Score = 79.0 bits (186), Expect = 1e-13
Identities = 34/83 (40%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 EYATLENSSSVKVF-KNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELV 186
EYA E++S +K++ KNF+ERKS +P + AE IFGG +L + + + F +DWE ++
Sbjct: 418 EYAVRESTSRIKIYSKNFQERKSIRPPFSAERIFGGVLLAMCTNDFICF--HDWEEGRMI 475
Query: 187 RRIEIQPRHVFWSESGNLVCLAT 255
RRI++ ++++W++SG+LV +A+
Sbjct: 476 RRIDVNVKNLYWADSGDLVTIAS 498
>UniRef50_Q4Q3L5 Cluster: Beta prime cop protein, putative; n=7;
Trypanosomatidae|Rep: Beta prime cop protein, putative -
Leishmania major
Length = 884
Score = 89.4 bits (212), Expect = 7e-17
Identities = 37/80 (46%), Positives = 56/80 (70%)
Frame = +3
Query: 267 FILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLNRINY 446
F+LK+NA V + E NT +DG++ +F++V E++E V+ WVGDCF+Y N ++R+NY
Sbjct: 487 FLLKFNADAVAQYLEQNTTTGDDGLDFSFDLVEELDEKVRDVAWVGDCFVYMNQVHRLNY 546
Query: 447 YVGGEIVTVAHLDHTMYILG 506
Y+GGEI +A L Y+LG
Sbjct: 547 YIGGEINNIAVLSRNQYLLG 566
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
+S YA LE S+++K+ K FK R + A +FGG +L V++ S + F YDW L
Sbjct: 400 ESGAYAVLEGSTTLKIHKGFKGRAALSLPEAANKLFGGPLLAVRTSSSIMF--YDWGTLA 457
Query: 181 LVRRIEIQPRHVFWSESGNLVCLAT 255
L+R+I+ P + W+ +G LV L T
Sbjct: 458 LIRQIDETPTALEWNSTGELVALVT 482
Score = 46.4 bits (105), Expect = 7e-04
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +2
Query: 479 SRPHYVHTGIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTE 658
SR Y+ G + KENRL+ DK+ NI EY A++R DF+ A+ +LPTI
Sbjct: 559 SRNQYL-LGYLPKENRLFCIDKKKNITSYLLQVNAIEYMAAIVREDFDAANALLPTIDVS 617
Query: 659 HR 664
R
Sbjct: 618 LR 619
>UniRef50_Q6CB55 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 873
Score = 88.2 bits (209), Expect = 2e-16
Identities = 35/83 (42%), Positives = 60/83 (72%)
Frame = +3
Query: 258 ETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLNR 437
+ +++L+YN V A ++ EDG+E++FE++ E++++V++G W+ DCF+YT+++NR
Sbjct: 480 DAFYVLRYNKDAVDEAE----NVDEDGVEESFELLHEISDSVRSGEWLLDCFVYTSSVNR 535
Query: 438 INYYVGGEIVTVAHLDHTMYILG 506
+NY VGG TVAH D Y+LG
Sbjct: 536 LNYLVGGVTYTVAHFDKAKYLLG 558
Score = 84.2 bits (199), Expect = 3e-15
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERK--SFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEH 174
DSSEYA LE+ SSV+V+KNFKER P + EGIFGG +LGVK VA Y WE
Sbjct: 393 DSSEYAVLESPSSVRVYKNFKERPLGHVDPNFSVEGIFGGTLLGVKGHGFVA--MYSWET 450
Query: 175 LELVRRIEIQ-PRHVFWSESGNLVCLAT 255
+LVRRI+++ V WS+SG LV + +
Sbjct: 451 GQLVRRIDVEGVTGVHWSDSGELVAITS 478
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADR-VLPTIPTE 658
G V+K++R+YL DK++N+ EYQT V+RGD E A LP IP E
Sbjct: 558 GFVSKDSRIYLCDKDVNVSSYRLSVPLVEYQTVVLRGDVELAQSDFLPAIPEE 610
>UniRef50_P41811 Cluster: Coatomer subunit beta'; n=6;
Saccharomycetales|Rep: Coatomer subunit beta' -
Saccharomyces cerevisiae (Baker's yeast)
Length = 889
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/85 (42%), Positives = 55/85 (64%)
Frame = +3
Query: 264 YFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLNRIN 443
Y +L A + A N D +E G+++AF+V+ E++E++ +G WVGD FI+T NR+N
Sbjct: 498 YTLLFNKDAYLEAANNGNIDDSE-GVDEAFDVLYELSESITSGKWVGDVFIFTTATNRLN 556
Query: 444 YYVGGEIVTVAHLDHTMYILG*LLR 518
Y+VGG+ +AH MY+LG L R
Sbjct: 557 YFVGGKTYNLAHYTKEMYLLGYLAR 581
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFK-PEYGA-EGIFGGYMLGVKSISGVAFSFYDWEH 174
DS+ YA ++ + +K +KNFKE S+ P + A + +F G +LGVKS G + F+DW++
Sbjct: 403 DSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKS-DGFVY-FFDWDN 460
Query: 175 LELVRRIEIQPRHVFWSESGNLVCL 249
LVRRI++ + V WS++G LV +
Sbjct: 461 GTLVRRIDVNAKDVIWSDNGELVMI 485
Score = 39.9 bits (89), Expect = 0.056
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETA-DRVLPTI 649
G +A++N++YL D+E+++ E+QT +RG+ E A + VLP +
Sbjct: 577 GYLARDNKVYLADREVHVYGYEISLEVLEFQTLTLRGEIEEAIENVLPNV 626
>UniRef50_O42937 Cluster: Probable coatomer subunit beta'; n=1;
Schizosaccharomyces pombe|Rep: Probable coatomer subunit
beta' - Schizosaccharomyces pombe (Fission yeast)
Length = 796
Score = 77.0 bits (181), Expect = 4e-13
Identities = 31/88 (35%), Positives = 56/88 (63%)
Frame = +3
Query: 243 VFGYDETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYT 422
+ D+ +++L +NA + A E+ T E+G+ D+FE + +V+E+V G WV + FIYT
Sbjct: 478 ILACDDDFYLLGFNAEMFYSAVESGTADEEEGVADSFEALADVSESVVNGKWVAETFIYT 537
Query: 423 NTLNRINYYVGGEIVTVAHLDHTMYILG 506
T R+NY +G + +A+++ + Y+LG
Sbjct: 538 TTAARLNYLIGDQTYKIANVESSFYLLG 565
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
DS+ Y + + S+ + KNFKE Y + IFGG++LGV + FYDW+
Sbjct: 399 DSNVYGSRTSDRSIVIHKNFKESNRLDLSYSCDKIFGGFLLGV--VGSDFICFYDWDTGI 456
Query: 181 LVRRIEIQPRHVFWSESGNLVCLA 252
LVR+I+++P+ V+W++ G V LA
Sbjct: 457 LVRKIDVKPKGVYWNDDGRFVILA 480
Score = 41.5 bits (93), Expect = 0.019
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEHR 664
G + +++R+YL D+++N+ EYQ+ V++GD E A +L I R
Sbjct: 565 GYIPRDDRIYLTDRDMNVVSYSFNLAIIEYQSLVLKGDLEAAQGLLEQISETDR 618
>UniRef50_Q6WWJ3 Cluster: COPI protein; n=9; Plasmodium|Rep: COPI
protein - Plasmodium falciparum
Length = 1010
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/84 (36%), Positives = 52/84 (61%)
Frame = +1
Query: 4 SSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLEL 183
+ +YA + + V ++K+F F+ Y +FGGY+LGVKS + + F YDW L
Sbjct: 403 TGDYAIKDEGNKVSIYKDFTSHHIFQTPYTITQLFGGYLLGVKSNNFICF--YDWSDYSL 460
Query: 184 VRRIEIQPRHVFWSESGNLVCLAT 255
+R+I+I ++VFW++SG V ++T
Sbjct: 461 IRKIDINVKNVFWNDSGTYVAIST 484
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +3
Query: 342 EDAFEVVGEVNETVKTGIWVGDCFIYTNTLNRINYYVGGEIVTVAHLDHTMYILG 506
E+ F++ E+NE++++GIW+ D F+Y + R+ Y I A++D +YI G
Sbjct: 547 ENYFQLESEINESIESGIWIYDSFLYISKNLRLYIYTKKFIDIYAYIDKYLYICG 601
>UniRef50_Q5CXT5 Cluster: Coatomer complex beta; n=3;
Apicomplexa|Rep: Coatomer complex beta - Cryptosporidium
parvum Iowa II
Length = 1157
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
D +A EN + ++ NFKE SF P + + IFGG +LGVKS + FYDW
Sbjct: 419 DGHFFAIRENGGRIVIYNNFKESFSFLPSFFVDEIFGGQLLGVKSNEFIC--FYDWNECR 476
Query: 181 LVRRIEIQP--RHVFWSESGNLVCLAT 255
L+RRI++ +V+W + GN VC+ +
Sbjct: 477 LIRRIDVSSPINNVYWDDIGNYVCITS 503
Score = 59.3 bits (137), Expect = 9e-08
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 15/104 (14%)
Frame = +3
Query: 240 CVFGYDETYFILKYNAAVVTR--------ARETNTDIT-----EDGIEDAFEVVGEVNET 380
C+ D T++ILKYN V + + +T I DGIE AF+ + E+N+
Sbjct: 500 CITSSD-TFYILKYNKNQVEEILSSPSYPSNDHHTGINMHVDNNDGIEIAFDFISEINDK 558
Query: 381 VKTGIWVGDCFIYTNTLNRINYYVGGEIVTVAHL-DHTMY-ILG 506
V++G+W+ CF+Y + R+ ++ G I VA+L + TMY ILG
Sbjct: 559 VESGVWISTCFVYVTSQMRLQIWMNGFIDLVAYLPEKTMYHILG 602
>UniRef50_A5E5I5 Cluster: Coatomer beta' subunit; n=5;
Saccharomycetales|Rep: Coatomer beta' subunit -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 949
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +1
Query: 13 YATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELVRR 192
+A E+S SVKV KNF+E +Y A+ IFGG +LGVKS V SFYDWE +L RR
Sbjct: 406 FAIRESSISVKVLKNFQEYLVIDLQYQADKIFGGALLGVKSEGCV--SFYDWESGKLARR 463
Query: 193 IEIQPR--HVFWSESGNLVCLATMKHXXXXXXXLPL 294
++I V WS++G L+ + T + PL
Sbjct: 464 VDIDEEISDVIWSDNGELLAIVTTSNAGDRSSSTPL 499
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEV--NETVKTGIWVGDCFIYTN- 425
DETYF L Y+ V +A + E+G E +F+V+ + +E++ +G ++GD F+YT
Sbjct: 507 DETYF-LSYDREVFDQALANDELDVEEGAEQSFDVLYTLPTSESILSGKFIGDVFVYTTA 565
Query: 426 TLNRINYYVGGEIVTVAHLDHTMYILG 506
+ NR+NY+VGGE++ + H D YILG
Sbjct: 566 STNRLNYFVGGEVINLGHFDRKFYILG 592
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 470 GCASRPHYVHTGIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFE 622
G R Y+ G A++ RL+L DK ++ E QT VMRGD E
Sbjct: 582 GHFDRKFYI-LGYKAQDGRLFLIDKSFDVISWYLNTSMLELQTLVMRGDLE 631
>UniRef50_Q0U6J1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 792
Score = 67.7 bits (158), Expect = 2e-10
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +3
Query: 375 ETVKTGIWVGDCFIYTNTLNRINYYVGGEIVTVAHLDHTMYILG*LLR 518
++V+TG WVGDCFIYTN+ NR+NY VG + T++H D Y+LG L R
Sbjct: 450 DSVRTGCWVGDCFIYTNSTNRLNYLVGDQTYTISHFDSPHYVLGYLPR 497
Score = 59.7 bits (138), Expect = 7e-08
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = +2
Query: 485 PHYVHTGIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTE 658
PHYV G + +++R+Y+ DK++N+ EYQT ++RGD E+AD +LPT+P +
Sbjct: 488 PHYV-LGYLPRDSRIYIADKDVNVVSFALSLAVVEYQTLILRGDLESADELLPTVPKD 544
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 10 EYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGV 147
+YA E+S+SVK+F+NFKER + A+G+ GG +LGVK G+
Sbjct: 404 DYAIRESSTSVKIFRNFKERSVLNVGFSADGLSGGVLLGVKGQGGI 449
>UniRef50_A0BJC2 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=2; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_11, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 848
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +1
Query: 4 SSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLEL 183
+ +YA E S+K+FKN K +Y E +F G +LG +S + F YDW+ ++
Sbjct: 397 NGDYAVRE-MYSIKIFKNNTLSYEMKTDYMVEQLFAGPLLGARSSEFIIF--YDWDTAKV 453
Query: 184 VRRIEIQPRHVFWSESGNLVCLAT 255
+RRI++ P+ V W+++ + LAT
Sbjct: 454 IRRIDVSPKKVIWNDTNTIAALAT 477
Score = 46.0 bits (104), Expect = 9e-04
Identities = 26/84 (30%), Positives = 45/84 (53%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
DE YF L+Y+ + + + DG EDAF+ + ++ E++ +G ++ D F YT
Sbjct: 479 DEVYF-LQYDPEQLPIFLQQEEE--PDGFEDAFQPLCDITESINSGYFIQDVFYYTTLNG 535
Query: 435 RINYYVGGEIVTVAHLDHTMYILG 506
+I Y V G++ V D +I+G
Sbjct: 536 KIAYSVNGKVFIVDQ-DKRYFIIG 558
Score = 41.9 bits (94), Expect = 0.014
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 491 YVHTGIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEH 661
Y G + ++N+LYL DK +I E+QT +++ ++ A+ +L TIP ++
Sbjct: 554 YFIIGYIQQQNKLYLIDKNYSIISYEVNSNVVEFQTQILKKQYQKAEEILQTIPLQY 610
>UniRef50_A2EQL7 Cluster: WD repeat protein, putative; n=1;
Trichomonas vaginalis G3|Rep: WD repeat protein,
putative - Trichomonas vaginalis G3
Length = 785
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
+S+++A L + V++ E K K Y A IFGGY+LG+++ S + +FYDW+ E
Sbjct: 399 NSTDFAVLTENGDVEIHLGNDEPKLIKNSY-ATNIFGGYLLGIQNSSSL--TFYDWKSNE 455
Query: 181 LVRRIEIQPRHVFW 222
++R+IEI+ V W
Sbjct: 456 IIRKIEIEAEDVIW 469
>UniRef50_A2E6J4 Cluster: WD repeat protein, putative; n=1;
Trichomonas vaginalis G3|Rep: WD repeat protein,
putative - Trichomonas vaginalis G3
Length = 817
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
+S+ +A L + + V+K+F + + A I+GG ++G +G+ FYDWE L+
Sbjct: 427 NSTSFAALNTNRLITVYKSFDDSQVLN--VFALKIWGGELIGALVNNGL--EFYDWEDLQ 482
Query: 181 LVRRIEIQPRHVFWSESGNLVCLAT 255
LVRRIE+ P V W GN V + T
Sbjct: 483 LVRRIEVHPSEVLW--YGNYVAIRT 505
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 276 KYNAAVVTRARETNTDITE-DGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLNRINYYV 452
K N V++ E ++ + G ED+F+VV +V+ + W ++T+ ++N
Sbjct: 506 KTNIVVLSYNSEYQSEFVQGSGYEDSFDVVYDVDGKASSICWANGILLFTDG-QKVNRIS 564
Query: 453 GGEIVTVAHLDHTMYILG*LLR 518
G ++ A +T+ ++G L R
Sbjct: 565 AGIVLPTASFKNTVDLIGYLPR 586
>UniRef50_A7AQY1 Cluster: Coatomer beta subunit, putative; n=1;
Babesia bovis|Rep: Coatomer beta subunit, putative -
Babesia bovis
Length = 873
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +3
Query: 267 FILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLNRINY 446
+ILKYN+ ++ A + +G+ AFE+ GE+ E V + W D FIYT +N+
Sbjct: 494 YILKYNSDELSAAIDNQEYDASNGVASAFELDGEIMERVNSATWALDTFIYTTAGLHLNF 553
Query: 447 YVGGEIVTVAHLDHTMYILG 506
+ G +LD ++++G
Sbjct: 554 WTAGTSEIFHYLDRPLHMIG 573
Score = 49.6 bits (113), Expect = 7e-05
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +1
Query: 10 EYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELVR 189
+YAT + + + ++F + +P+ I GG++LGV S + V F YDW+ LVR
Sbjct: 411 DYATWDGHE-ITIHQDFNPVTTIRPDVPVTSIHGGHLLGVTSNNSVMF--YDWKTWYLVR 467
Query: 190 RIEIQPRHVFWSESGNLVCL 249
IE ++W+ SG V L
Sbjct: 468 TIEAGVFDIWWNASGTKVAL 487
>UniRef50_A2DXW1 Cluster: WD repeat protein, putative; n=1;
Trichomonas vaginalis G3|Rep: WD repeat protein,
putative - Trichomonas vaginalis G3
Length = 857
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +1
Query: 4 SSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLEL 183
S +Y V + K + IFGG++LG+ S + F YDW+ L L
Sbjct: 404 SGDYFATRLGKQVTIHKLKGNPQKLTHGVNVTSIFGGHLLGLASNESIFF--YDWQFLNL 461
Query: 184 VRRIEIQPRHVFWSESGNLVCLAT 255
+R+I+++ +V+W N V +AT
Sbjct: 462 IRQIDVKATNVWWC-GANKVAIAT 484
>UniRef50_Q4UGX0 Cluster: Beta subunit of coatomer complex,
putative; n=2; Theileria|Rep: Beta subunit of coatomer
complex, putative - Theileria annulata
Length = 940
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/68 (25%), Positives = 39/68 (57%)
Frame = +3
Query: 303 ARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLNRINYYVGGEIVTVAHL 482
A + + + E+ E+ F+ E+ E V + +WV D F++ + + ++ Y+ G T+ +L
Sbjct: 552 AEDLDENEAEELEEEIFQFEKELVERVTSALWVNDTFLFVTSNSHLSMYLAGNTETLVYL 611
Query: 483 DHTMYILG 506
D ++++G
Sbjct: 612 DKQLHLVG 619
Score = 39.1 bits (87), Expect = 0.099
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 EYATLENSSSVKVFKNFKERKSFK-PEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELV 186
+YAT + V VF F R+ + + + GG +LGV + V FY W V
Sbjct: 446 DYATYDGFE-VSVFSEFTLREKLDLQQTQVQKLHGGKLLGVST--DVDILFYTWPPCMPV 502
Query: 187 RRIEIQPRHVFWSESGNLVCLAT 255
+R +Q ++W S N + LA+
Sbjct: 503 KRFSLQVDDIYWHPSSNRLALAS 525
>UniRef50_A0DZB5 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 249
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 333 DGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLNRINYYVGGEIVTV 473
DG EDAF+ + + E++ +G ++ D F YT +I Y V G+I V
Sbjct: 51 DGFEDAFQPLCDTTESINSGYFIQDVFYYTTMNGKIAYSVNGKIFIV 97
Score = 37.1 bits (82), Expect = 0.40
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 509 VAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEH 661
+ ++N+LYL DK+ NI E+QT +++ A+ L TIP ++
Sbjct: 109 IQQQNKLYLIDKKYNIISYEVNSNVVEFQTRILKKQCTKAEETLQTIPIQY 159
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 157 FYDWEHLELVRRIEIQPRHVFWSESGNLVCLAT 255
FYDWE +L+RRI+ P V +++ +V LAT
Sbjct: 2 FYDWETGKLIRRIDFFPNKVILNDTNTIVALAT 34
>UniRef50_Q5VQ77 Cluster: Coatomer protein complex, beta prime
subunit-like; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Coatomer protein complex, beta
prime subunit-like - Oryza sativa subsp. japonica (Rice)
Length = 328
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 587 EYQTAVMRGDFETADRVLPTIP 652
EY+T VMRGD E A+ +LP+IP
Sbjct: 11 EYKTLVMRGDIERANDILPSIP 32
>UniRef50_Q5U8N1 Cluster: MYST; n=3; Entamoeba histolytica|Rep: MYST
- Entamoeba histolytica
Length = 414
Score = 34.3 bits (75), Expect = 2.8
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 378 TVKTGIWVGDCFIYTNTLNRINYYVGGEIVTVAHL 482
T+KTGI DC +TLN I+ Y G +I+++ H+
Sbjct: 337 TLKTGITKEDCVSALDTLNCISPYRGSQIISINHI 371
>UniRef50_A1I9P7 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 132
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 174 MFPIVERECYSADRLHAEHVASEYTFSTVLGLEAFSLLEIL 52
+F I++R C+ + H SEY F VL L A S L IL
Sbjct: 77 LFYILKRFCFGGFETDSRHNFSEYNFMIVLNLTALSFLIIL 117
>UniRef50_Q0IXJ8 Cluster: Os10g0428200 protein; n=3; Oryza
sativa|Rep: Os10g0428200 protein - Oryza sativa subsp.
japonica (Rice)
Length = 142
Score = 33.1 bits (72), Expect = 6.5
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = -3
Query: 368 FTNYLKRI--FNSIL--SNVGISLPCSG-HNGSVVLQDEVCFIVAKHTRFPLSDQNT*RG 204
F N +KR+ + +IL SN IS CSG HNG L + V V ++FP+ + N+ G
Sbjct: 1 FHNTVKRVRSYGNILCESNTSIS-GCSGCHNGDKELLNAVLLDVKSGSQFPVLESNSVHG 59
Query: 203 *ISIRLTSSKCSQS*NENATPLI 135
I LTS S+ N TP++
Sbjct: 60 -NEISLTSE--SEVSNLRYTPMV 79
>UniRef50_P19615 Cluster: Major yolk protein precursor; n=10;
Eukaryota|Rep: Major yolk protein precursor -
Strongylocentrotus purpuratus (Purple sea urchin)
Length = 1357
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +3
Query: 309 ETNTDITEDG----IEDAFEVVGEVNETVKTGIWVGDCFIYTNTLNRINYYVGGEIVTVA 476
E NT TED + + + + GE + + IW + + Y +TLN+ N+ +G + V
Sbjct: 1206 EYNTSFTEDNMWSDVSNKYVLTGEQDIYRQIPIWGNNSYFYDHTLNK-NFELGNHSIIVE 1264
Query: 477 HL 482
H+
Sbjct: 1265 HV 1266
>UniRef50_A0CDI7 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 469
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +3
Query: 225 RKREPCVFGYDETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVG 404
RK + V + + + K + + T+ E +E AFE+VG V E T V
Sbjct: 356 RKNDIYVMMVSDVHNVCKKGFFIAILSTNVETNNPEKELEPAFEIVGPVLEKFVT---VS 412
Query: 405 DCFIYTNTLNRINYYVGGEIVTVAHLD 485
D ++ T+ ++ N Y+ +H +
Sbjct: 413 DVYVPTDDGSKDNIYISSSFDPQSHFE 439
>UniRef50_Q7SI66 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 330
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 70 KSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELVRRIEIQPRHVFWSESGNLVCL 249
++ PE+ A+ I G M G K I G FY+ + E V I P W + CL
Sbjct: 159 ETLSPEHRAQHISAGAMAGSKGIGGYHRVFYNKDTGECVSVIFFGPATTGWPGVVHGGCL 218
Query: 250 ATM 258
AT+
Sbjct: 219 ATL 221
>UniRef50_Q9V0I9 Cluster: Putative uncharacterized protein; n=1;
Pyrococcus abyssi|Rep: Putative uncharacterized protein
- Pyrococcus abyssi
Length = 433
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 31 SSSVKVFKNFKERKSFKPEYG-AEGIFGGYMLGVKSISGVAFSFYD--WE 171
S S F N KE K + EYG G+F GY++ VK + V + D WE
Sbjct: 101 SGSGLYFINGKEVKKYDLEYGNVRGVFQGYLVAVKGFNVVVMNESDVVWE 150
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,892,263
Number of Sequences: 1657284
Number of extensions: 13369796
Number of successful extensions: 33828
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 32714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33793
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -