Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021688
(685 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023906-1|ABA81840.1| 914|Drosophila melanogaster GH18655p pro... 131 1e-30
AJ006524-1|CAA07085.1| 914|Drosophila melanogaster coatomer, be... 131 1e-30
AJ006523-1|CAA07084.1| 914|Drosophila melanogaster coatomer, be... 131 1e-30
AE014134-2340|AAF53294.2| 914|Drosophila melanogaster CG6699-PA... 131 1e-30
BT024440-1|ABC86502.1| 142|Drosophila melanogaster IP02048p pro... 29 4.5
>BT023906-1|ABA81840.1| 914|Drosophila melanogaster GH18655p
protein.
Length = 914
Score = 131 bits (316), Expect = 1e-30
Identities = 58/85 (68%), Positives = 74/85 (87%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
+S+EYA EN+ +V++F+NFKERKSF PEYGAE I+GGY GVK+ SG+A FYDWE L+
Sbjct: 401 ESNEYAIRENNGTVRLFRNFKERKSFTPEYGAESIYGGYYFGVKTSSGLA--FYDWETLQ 458
Query: 181 LVRRIEIQPRHVFWSESGNLVCLAT 255
LVRRIE+QP++VFW+ESG+LVCLAT
Sbjct: 459 LVRRIEVQPKNVFWNESGSLVCLAT 483
Score = 128 bits (309), Expect = 7e-30
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
D++YF+L + A V A ET + +DG+E AF V+GEV+E VKTG+WVGDCFIYTN++N
Sbjct: 484 DDSYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVKTGLWVGDCFIYTNSVN 543
Query: 435 RINYYVGGEIVTVAHLDHTMYILG 506
RINYYVGGEIVTV+HLD TMY+LG
Sbjct: 544 RINYYVGGEIVTVSHLDRTMYLLG 567
Score = 71.3 bits (167), Expect = 1e-12
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEHR 664
G V K+NR+YL DKELN+ EYQTAVMR DFE AD VLPTIP EHR
Sbjct: 567 GYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEHR 620
>AJ006524-1|CAA07085.1| 914|Drosophila melanogaster coatomer,
beta-prime subunit protein.
Length = 914
Score = 131 bits (316), Expect = 1e-30
Identities = 58/85 (68%), Positives = 74/85 (87%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
+S+EYA EN+ +V++F+NFKERKSF PEYGAE I+GGY GVK+ SG+A FYDWE L+
Sbjct: 401 ESNEYAIRENNGTVRLFRNFKERKSFTPEYGAESIYGGYYFGVKTSSGLA--FYDWETLQ 458
Query: 181 LVRRIEIQPRHVFWSESGNLVCLAT 255
LVRRIE+QP++VFW+ESG+LVCLAT
Sbjct: 459 LVRRIEVQPKNVFWNESGSLVCLAT 483
Score = 128 bits (309), Expect = 7e-30
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
D++YF+L + A V A ET + +DG+E AF V+GEV+E VKTG+WVGDCFIYTN++N
Sbjct: 484 DDSYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVKTGLWVGDCFIYTNSVN 543
Query: 435 RINYYVGGEIVTVAHLDHTMYILG 506
RINYYVGGEIVTV+HLD TMY+LG
Sbjct: 544 RINYYVGGEIVTVSHLDRTMYLLG 567
Score = 71.3 bits (167), Expect = 1e-12
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEHR 664
G V K+NR+YL DKELN+ EYQTAVMR DFE AD VLPTIP EHR
Sbjct: 567 GYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEHR 620
>AJ006523-1|CAA07084.1| 914|Drosophila melanogaster coatomer,
beta-prime subunit protein.
Length = 914
Score = 131 bits (316), Expect = 1e-30
Identities = 58/85 (68%), Positives = 74/85 (87%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
+S+EYA EN+ +V++F+NFKERKSF PEYGAE I+GGY GVK+ SG+A FYDWE L+
Sbjct: 401 ESNEYAIRENNGTVRLFRNFKERKSFTPEYGAESIYGGYYFGVKTSSGLA--FYDWETLQ 458
Query: 181 LVRRIEIQPRHVFWSESGNLVCLAT 255
LVRRIE+QP++VFW+ESG+LVCLAT
Sbjct: 459 LVRRIEVQPKNVFWNESGSLVCLAT 483
Score = 128 bits (309), Expect = 7e-30
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
D++YF+L + A V A ET + +DG+E AF V+GEV+E VKTG+WVGDCFIYTN++N
Sbjct: 484 DDSYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVKTGLWVGDCFIYTNSVN 543
Query: 435 RINYYVGGEIVTVAHLDHTMYILG 506
RINYYVGGEIVTV+HLD TMY+LG
Sbjct: 544 RINYYVGGEIVTVSHLDRTMYLLG 567
Score = 71.3 bits (167), Expect = 1e-12
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEHR 664
G V K+NR+YL DKELN+ EYQTAVMR DFE AD VLPTIP EHR
Sbjct: 567 GYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEHR 620
>AE014134-2340|AAF53294.2| 914|Drosophila melanogaster CG6699-PA
protein.
Length = 914
Score = 131 bits (316), Expect = 1e-30
Identities = 58/85 (68%), Positives = 74/85 (87%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
+S+EYA EN+ +V++F+NFKERKSF PEYGAE I+GGY GVK+ SG+A FYDWE L+
Sbjct: 401 ESNEYAIRENNGTVRLFRNFKERKSFTPEYGAESIYGGYYFGVKTSSGLA--FYDWETLQ 458
Query: 181 LVRRIEIQPRHVFWSESGNLVCLAT 255
LVRRIE+QP++VFW+ESG+LVCLAT
Sbjct: 459 LVRRIEVQPKNVFWNESGSLVCLAT 483
Score = 128 bits (309), Expect = 7e-30
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
D++YF+L + A V A ET + +DG+E AF V+GEV+E VKTG+WVGDCFIYTN++N
Sbjct: 484 DDSYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVKTGLWVGDCFIYTNSVN 543
Query: 435 RINYYVGGEIVTVAHLDHTMYILG 506
RINYYVGGEIVTV+HLD TMY+LG
Sbjct: 544 RINYYVGGEIVTVSHLDRTMYLLG 567
Score = 71.3 bits (167), Expect = 1e-12
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEHR 664
G V K+NR+YL DKELN+ EYQTAVMR DFE AD VLPTIP EHR
Sbjct: 567 GYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEHR 620
>BT024440-1|ABC86502.1| 142|Drosophila melanogaster IP02048p
protein.
Length = 142
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 366 HQLP-QTHLQFHPQ*CRY*SPLLWSQRQRCTSG*SMFHRSQTHKVPAFGPKH 214
HQLP Q QF P P LW +R+ +G + +SQ V A P H
Sbjct: 45 HQLPVQLPAQFGPSSLCPGGPSLWIRRRLHRTGAPLRGKSQPRAVAAISPAH 96
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,596,225
Number of Sequences: 53049
Number of extensions: 640773
Number of successful extensions: 1681
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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