Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021688
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 124 8e-29
Z81492-5|CAB04024.1| 368|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z70038-3|CAA93883.2| 541|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68227-5|CAA92510.1| 330|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical pr... 29 3.1
AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein. 29 3.1
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 3.1
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 3.1
U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81557-6|CAB04529.1| 357|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 28 7.1
AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical... 28 7.1
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 27 9.4
U28740-2|AAM51506.2| 417|Caenorhabditis elegans Hypothetical pr... 27 9.4
U28740-1|AAA68317.3| 434|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 124 bits (298), Expect = 8e-29
Identities = 53/84 (63%), Positives = 68/84 (80%)
Frame = +3
Query: 255 DETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
D+++++LKY+A V A T++TEDGIEDAFEV+GE E VKTG W+GDCFI+T LN
Sbjct: 485 DDSFYVLKYSAEAVANA----TEVTEDGIEDAFEVIGEQAEAVKTGFWIGDCFIFTTALN 540
Query: 435 RINYYVGGEIVTVAHLDHTMYILG 506
RINYYVGGEIVT+AH+D +Y+LG
Sbjct: 541 RINYYVGGEIVTIAHVDRPLYLLG 564
Score = 74.1 bits (174), Expect = 8e-14
Identities = 33/83 (39%), Positives = 56/83 (67%)
Frame = +1
Query: 1 DSSEYATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLE 180
D + +A E++++VK+ KNFK+ KS + + EGI GG +L ++S + + F+DWE
Sbjct: 402 DPNMFAVRESATNVKIKKNFKDHKSIRSDMVLEGISGGPLLALRSNNSLC--FFDWESAV 459
Query: 181 LVRRIEIQPRHVFWSESGNLVCL 249
LVRRIEI + ++WS++G +V +
Sbjct: 460 LVRRIEITSKSIYWSDNGEMVAI 482
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +2
Query: 482 RPHYVHTGIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFETADRVLPTIPTEH 661
RP Y+ G +AKE+R+Y DK+LN+ EYQTAVMR DF+TAD+VL TIP E
Sbjct: 558 RPLYL-LGYMAKESRVYAVDKDLNVISYKLLLSVLEYQTAVMRRDFDTADKVLTTIPKEQ 616
Query: 662 R 664
R
Sbjct: 617 R 617
>Z81492-5|CAB04024.1| 368|Caenorhabditis elegans Hypothetical
protein E03H4.8 protein.
Length = 368
Score = 108 bits (260), Expect = 3e-24
Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Frame = +3
Query: 231 REPCVFGYDETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDC 410
RE D+++++ KY+A V A T++TEDGIEDAF+V+GE E V+TG W+GDC
Sbjct: 188 REMVAICGDDSFYVFKYSAEAVANA----TEVTEDGIEDAFKVIGEQAEAVETGFWIGDC 243
Query: 411 FIYTN--TLNRINYYVGGEIVTVAHLDHTMYILG 506
FI+T T+NRIN+Y GGEIVTVAH+D + +LG
Sbjct: 244 FIFTTALTINRINHYAGGEIVTVAHVDRPLCLLG 277
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/79 (40%), Positives = 52/79 (65%)
Frame = +1
Query: 13 YATLENSSSVKVFKNFKERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELVRR 192
+A E++++VK+ KNFK+ KS + + EGI GG +L ++S + F+DWE LVRR
Sbjct: 117 FAVRESATNVKIKKNFKDHKSIRSDMMLEGISGGPLLALRSNDSLC--FFDWESAALVRR 174
Query: 193 IEIQPRHVFWSESGNLVCL 249
IEI + V+WS++ +V +
Sbjct: 175 IEITSKSVYWSDNREMVAI 193
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 503 GIVAKENRLYLNDKELNIXXXXXXXXXXEYQTAVMRGDFET 625
G +A+++R+Y DK+LN+ EYQTA MR D T
Sbjct: 277 GYMAEDSRVYAVDKDLNVISYELFQSDLEYQTATMRRDIGT 317
>Z70038-3|CAA93883.2| 541|Caenorhabditis elegans Hypothetical
protein ZK1067.4 protein.
Length = 541
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Frame = +3
Query: 201 SASSRVLVRKREPCVFGYDETYFILKYNAAVVT-----RARETNTDITEDGIEDAFEVVG 365
S S +L+ + PC GY+ + +V +R ++ + +EDA + +
Sbjct: 56 SGSQPLLIYQHGPCAQGYNFVPIVFGLMLYIVYLMECWHSRTKIINMKKVRVEDALDYIT 115
Query: 366 EVNETVKTGIWVGDCFIYTNTLNRINYYVGGEIVTVAHL 482
+ + W C+ YT ++ Y G+ V+ +
Sbjct: 116 ALRTSPPIVWWKSVCYHYTRKTRQVTRYRNGDAVSATQV 154
>Z68227-5|CAA92510.1| 330|Caenorhabditis elegans Hypothetical
protein F49C12.6 protein.
Length = 330
Score = 29.1 bits (62), Expect = 3.1
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Frame = +3
Query: 156 VLRLGTFGTCQTY*DSASSRVLVRKREPCVFGYDETYFILKYNAAVVTRARETNTDITED 335
V R G F Q Y S +L CV G Y +K+ + R R + ED
Sbjct: 106 VTRFGLFANPQQYPKSDWLNIL-GVVTVCVGG--AIYAPIKH---IPARVRPAPWSLEED 159
Query: 336 GIEDAFEVVGEVNETVKT-----GIWVGDCFIYTNTLNRINYYVGGEIVTVAHLDHTMYI 500
+D VV EV+ T + I+VG F+Y N L INY + E +H D YI
Sbjct: 160 NYKDDPLVVKEVSCTRRILCLFLTIFVG--FLYGNFLTPINYIIANE--PGSHQDVRAYI 215
Query: 501 L 503
L
Sbjct: 216 L 216
>Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical
protein F13E6.6 protein.
Length = 1340
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 332 LSNVGISLPCSGHNGSVVLQDEVC 261
L +V + CS H+GSV + D++C
Sbjct: 673 LQSVSAASSCSHHSGSVAMDDDIC 696
>Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical
protein F13E6.6 protein.
Length = 1340
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 332 LSNVGISLPCSGHNGSVVLQDEVC 261
L +V + CS H+GSV + D++C
Sbjct: 673 LQSVSAASSCSHHSGSVAMDDDIC 696
>AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein.
Length = 1293
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 332 LSNVGISLPCSGHNGSVVLQDEVC 261
L +V + CS H+GSV + D++C
Sbjct: 626 LQSVSAASSCSHHSGSVAMDDDIC 649
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -3
Query: 611 PASLLSGTPAQIVVMNKKQCLTLCRLGIICSP*QLSQYVHSVVEMRNRDNLTANVVVYPV 432
P S+ G+ Q + KK +T+ LG++C P LS + EM+ D PV
Sbjct: 444 PTSVSHGSRPQSPAVPKKPSVTVSPLGLLCDP-NLS--IEKPEEMKTEDTKPVETAPAPV 500
Query: 431 QCVGIYEAI 405
+ +A+
Sbjct: 501 DEAELNDAL 509
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -3
Query: 611 PASLLSGTPAQIVVMNKKQCLTLCRLGIICSP*QLSQYVHSVVEMRNRDNLTANVVVYPV 432
P S+ G+ Q + KK +T+ LG++C P LS + EM+ D PV
Sbjct: 444 PTSVSHGSRPQSPAVPKKPSVTVSPLGLLCDP-NLS--IEKPEEMKTEDTKPVETAPAPV 500
Query: 431 QCVGIYEAI 405
+ +A+
Sbjct: 501 DEAELNDAL 509
>U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical
protein C52B9.4 protein.
Length = 558
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 393 IWVGDCFIYTNTLNRINYYVGGEIV 467
IWV C Y + RI Y++GG IV
Sbjct: 232 IWVYCCIKYYRDILRIQYWIGGVIV 256
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 330 EDGIEDAFEVVGEVNETVKTGI 395
EDG++D EV GEV E V GI
Sbjct: 306 EDGVKDVEEVDGEVEEEVVDGI 327
>Z81557-6|CAB04529.1| 357|Caenorhabditis elegans Hypothetical
protein F59A1.12 protein.
Length = 357
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 497 VHSVVEMRNRDNLTANVVVYPVQCVGIYEAISDPYACLHCFVDFTNYLK 351
+H +V ++N L + P+ +G+Y ISD Y+ + NY+K
Sbjct: 134 LHRLVLIKNGKLLRMYCMALPLMVIGMYGDISDSYSFVEIQTLNINYVK 182
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 321 DITEDGIEDAFEVVGEVNETVKTGIWVGDCFIYTNTLN 434
D+ + +D ++ GE++E +G G+ I+ NTLN
Sbjct: 648 DMKDSMRDDLMDIKGEIDEGSMSGSGYGNLGIFENTLN 685
>AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical
protein H20J04.1 protein.
Length = 843
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 77 SSPSTVLKVYSEATCSA*SLSAE*HSRSTIGNIWNLSDVLR 199
++ ST + +SEA S L H IG WNL +LR
Sbjct: 740 ATASTEISEFSEAIESTFDLDFTAHQTEIIGTYWNLRALLR 780
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical
protein F46C3.3 protein.
Length = 2557
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 353 KRIFNSILSNVGISLPCSGHNGSVVLQDEVCF 258
+ +F +L+ +G+ L CS H G + + D F
Sbjct: 330 EELFKWVLNRIGLQLKCSLHTGVISILDHYGF 361
>U28740-2|AAM51506.2| 417|Caenorhabditis elegans Hypothetical
protein B0563.6b protein.
Length = 417
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 669 PCRCSVGIVGR-TRSAVSKSPRITAVWY 589
PC C++GIVG T V S R+ AV Y
Sbjct: 23 PCICAIGIVGNITNLMVLASRRLRAVSY 50
>U28740-1|AAA68317.3| 434|Caenorhabditis elegans Hypothetical
protein B0563.6a protein.
Length = 434
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 669 PCRCSVGIVGR-TRSAVSKSPRITAVWY 589
PC C++GIVG T V S R+ AV Y
Sbjct: 32 PCICAIGIVGNITNLMVLASRRLRAVSY 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,765,918
Number of Sequences: 27780
Number of extensions: 331785
Number of successful extensions: 927
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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