Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021688
(685 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.2
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 2.1
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.1
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 3.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 3.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 3.6
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 4.7
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 4.7
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 4.7
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 4.7
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 4.7
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 4.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.7
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 22 4.7
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 6.3
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 6.3
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 8.3
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 1.2
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 70 KSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELVRRIEIQPRHVFWSESG 234
K +P YG + G + V SIS V+ D+ R+ PR F +G
Sbjct: 25 KRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAFKKRTG 79
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 109 GGYMLGVKSISGVAFSFYDW 168
GGY+LG++ ++ V +F+ +
Sbjct: 379 GGYLLGIQCLTVVCLAFWSF 398
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 621 SKSPRITAVWYSSTDSSNE*ETMFNSLSFRYNLFSLATIPV 499
SK P+I + + T +N +N+ YN+ + IPV
Sbjct: 298 SKEPKIISSLSNKTIHNNNNYNNYNNKKLYYNINYIEQIPV 338
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 401 RRLLHIYQHTEQDKLLRWR*DCHGC 475
+RLL++Y+ + D + +W GC
Sbjct: 279 QRLLYVYEDSTYDDINQWVYPLTGC 303
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 330 EDGIEDAFEVVGEVNETVKTGIWVGDCFIYTN 425
++GI D GEV ++ G + G+ + TN
Sbjct: 497 QEGIVDIVMANGEVATSLSDGSYFGEICLLTN 528
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 330 EDGIEDAFEVVGEVNETVKTGIWVGDCFIYTN 425
++GI D GEV ++ G + G+ + TN
Sbjct: 465 QEGIVDIVMANGEVATSLSDGSYFGEICLLTN 496
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 4.7
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 403 PTHMPVFTVSL 371
PTH P+FT+++
Sbjct: 58 PTHAPIFTIAV 68
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -2
Query: 639 RTRSAVSKSPRITAVWYSSTDSSNE*ETMFNSLSFRYNLFSLATIPV 499
RT SK P+I + ++ + SN + L + N +PV
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -2
Query: 639 RTRSAVSKSPRITAVWYSSTDSSNE*ETMFNSLSFRYNLFSLATIPV 499
RT SK P+I + ++ + SN + L + N +PV
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -2
Query: 639 RTRSAVSKSPRITAVWYSSTDSSNE*ETMFNSLSFRYNLFSLATIPV 499
RT SK P+I + ++ + SN + L + N +PV
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -2
Query: 639 RTRSAVSKSPRITAVWYSSTDSSNE*ETMFNSLSFRYNLFSLATIPV 499
RT SK P+I + ++ + SN + L + N +PV
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -2
Query: 639 RTRSAVSKSPRITAVWYSSTDSSNE*ETMFNSLSFRYNLFSLATIPV 499
RT SK P+I + ++ + SN + L + N +PV
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 645 VGRTRSAVSKSPRITAVWYSSTDSS 571
V T S+ S +PRI + SST SS
Sbjct: 504 VVETNSSPSPNPRIASAPSSSTSSS 528
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 606 CGAILRLPIVSYPQF 650
CG IL + +V YP F
Sbjct: 98 CGVILYILLVGYPPF 112
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 6.3
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +1
Query: 70 KSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELVRRIEIQPRHVFWSESG 234
K +P YG + G + V SIS ++ D+ R+ PR F +G
Sbjct: 25 KRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKKRTG 79
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 40 VKVFKNFKERK 72
VK+FK FK+RK
Sbjct: 429 VKLFKTFKDRK 439
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.3
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -2
Query: 639 RTRSAVSKSPRITAVWYSSTDSSNE*ETMFNSLSFRYNLFSLATIPV 499
RT SK P+I + ++ + SN + L + N +PV
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINHIEQIPVPV 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,521
Number of Sequences: 438
Number of extensions: 4289
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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